Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_N04
(441 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 49 3e-06
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 38 0.008
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 38 0.008
U14102-1|AAC46495.1| 299|Drosophila melanogaster putative rever... 36 0.019
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 36 0.019
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 36 0.019
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 34 0.075
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 34 0.075
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 34 0.075
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 34 0.075
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 34 0.075
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 33 0.13
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 32 0.30
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 30 1.2
AE014297-3620|AAF56330.3| 1954|Drosophila melanogaster CG6875-PA... 30 1.2
U95171-1|AAB51540.1| 1861|Drosophila melanogaster microtubule as... 30 1.6
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 30 1.6
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 30 1.6
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 30 1.6
AY075330-1|AAL68197.1| 867|Drosophila melanogaster GH11924p pro... 28 4.9
AE013599-1633|AAF58426.1| 867|Drosophila melanogaster CG13326-P... 28 4.9
AF220096-1|AAF26436.1| 380|Drosophila melanogaster homeobox pro... 28 6.5
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 48.8 bits (111), Expect = 3e-06
Identities = 31/86 (36%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Frame = +3
Query: 12 FLGITLDNKLQWGPHIKTLAGMLSSAAFAVRKIRQLTDIATARLVYFAYFH---SLMSYG 182
+LGITLD +L +GPH+K +R + T R Y H + YG
Sbjct: 753 YLGITLDKRLTFGPHLKATTRRCYQRMQQLRWLLNRKSTMTLRAKRAVYVHCVAPIWLYG 812
Query: 183 ILLWGTAAE--VDTIFTLQKRAVRAI 254
I +WG AA+ + I LQ RA+RAI
Sbjct: 813 IQIWGIAAKSNYNRIQVLQNRAMRAI 838
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 37.5 bits (83), Expect = 0.008
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Frame = +3
Query: 12 FLGITLDNKLQWGPHIKTLAGMLSSAAFAVR---KIRQLTDIATARLVYFAYFHSLMSYG 182
+LG+ LD +L W HI+ + L A + R + L+Y + + +YG
Sbjct: 738 YLGVHLDRRLTWRKHIEAKSKHLKLKARNLHWLINARSPLSLEFKALLYNSVLKPIWTYG 797
Query: 183 ILLWGTA--AEVDTIFTLQKRAVRAI 254
LWG A + +D I Q R +R I
Sbjct: 798 SELWGNASRSNIDIIQRAQSRILRII 823
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 37.5 bits (83), Expect = 0.008
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Frame = +3
Query: 12 FLGITLDNKLQWGPHIKTLAGMLSSAAFAVR---KIRQLTDIATARLVYFAYFHSLMSYG 182
+LG+ LD +L W HI+ + L A + R + L+Y + + +YG
Sbjct: 738 YLGVHLDRRLTWRKHIEAKSKHLKLKARNLHWLINARSPLSLEFKALLYNSVLKPIWTYG 797
Query: 183 ILLWGTA--AEVDTIFTLQKRAVRAI 254
LWG A + +D I Q R +R I
Sbjct: 798 SELWGNASRSNIDIIQRAQSRILRII 823
>U14102-1|AAC46495.1| 299|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 299
Score = 36.3 bits (80), Expect = 0.019
Identities = 30/112 (26%), Positives = 46/112 (41%), Gaps = 6/112 (5%)
Frame = +3
Query: 12 FLGITLDNKLQWGPHIKTLAGMLSSAAFAVRKI---RQLTDIATARLVYFAYFHSLMSYG 182
+LG+ LD+KL H+ L G ++A + I R T L+ + + Y
Sbjct: 14 YLGVILDSKLTLSSHVTKLMGKYTTAYRKMTWILNRRSKLPTKTKMLILKSVLSPIWQYA 73
Query: 183 ILLWG---TAAEVDTIFTLQKRAVRAIYNMGPRESLKNKFQEYDILTLPSQY 329
I WG T A++ I + R +R I G S + Y I T+ Y
Sbjct: 74 IAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTSNQTIRDRYGIKTVEEFY 125
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 36.3 bits (80), Expect = 0.019
Identities = 30/112 (26%), Positives = 46/112 (41%), Gaps = 6/112 (5%)
Frame = +3
Query: 12 FLGITLDNKLQWGPHIKTLAGMLSSAAFAVRKI---RQLTDIATARLVYFAYFHSLMSYG 182
+LG+ LD+KL H+ L G ++A + I R T L+ + + Y
Sbjct: 799 YLGVILDSKLTLSSHVTKLMGKYTTAYRKMTWILNRRSKLPTKTKMLILKSVLSPIWQYA 858
Query: 183 ILLWG---TAAEVDTIFTLQKRAVRAIYNMGPRESLKNKFQEYDILTLPSQY 329
I WG T A++ I + R +R I G S + Y I T+ Y
Sbjct: 859 IAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTSNQTIRDRYGIKTVEEFY 910
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 36.3 bits (80), Expect = 0.019
Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 6/91 (6%)
Frame = +3
Query: 12 FLGITLDNKLQWGPHIKTLAGMLSSAAFAVRKI---RQLTDIATARLVYFAYFHSLMSYG 182
+LG+TLD+KL H+ L G S+A + I R T L+ + + Y
Sbjct: 811 YLGVTLDSKLTLSSHVTKLLGKYSTAYRKLTWILNGRSKLPTKTKILILKSVLSPIWQYA 870
Query: 183 ILLWG---TAAEVDTIFTLQKRAVRAIYNMG 266
I WG T A++ + + R +R I G
Sbjct: 871 IAAWGPLVTDAQIRRVQVEENRKIRDICRAG 901
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial cds.
).
Length = 964
Score = 34.3 bits (75), Expect = 0.075
Identities = 28/112 (25%), Positives = 45/112 (40%), Gaps = 6/112 (5%)
Frame = +3
Query: 12 FLGITLDNKLQWGPHIKTLAGMLSSAAFAVRKI---RQLTDIATARLVYFAYFHSLMSYG 182
+LG+ LD+KL PH+ + G +A + I R T L+ + + Y
Sbjct: 683 YLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYA 742
Query: 183 ILLWG---TAAEVDTIFTLQKRAVRAIYNMGPRESLKNKFQEYDILTLPSQY 329
I WG T A++ I + R +R I G + Y + T+ Y
Sbjct: 743 IAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTKNQTIRDRYCVKTVEEFY 794
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 34.3 bits (75), Expect = 0.075
Identities = 28/112 (25%), Positives = 45/112 (40%), Gaps = 6/112 (5%)
Frame = +3
Query: 12 FLGITLDNKLQWGPHIKTLAGMLSSAAFAVRKI---RQLTDIATARLVYFAYFHSLMSYG 182
+LG+ LD+KL PH+ + G +A + I R T L+ + + Y
Sbjct: 799 YLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYA 858
Query: 183 ILLWG---TAAEVDTIFTLQKRAVRAIYNMGPRESLKNKFQEYDILTLPSQY 329
I WG T A++ I + R +R I G + Y + T+ Y
Sbjct: 859 IAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTKNQTIRDRYCVKTVEEFY 910
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 34.3 bits (75), Expect = 0.075
Identities = 28/112 (25%), Positives = 45/112 (40%), Gaps = 6/112 (5%)
Frame = +3
Query: 12 FLGITLDNKLQWGPHIKTLAGMLSSAAFAVRKI---RQLTDIATARLVYFAYFHSLMSYG 182
+LG+ LD+KL PH+ + G +A + I R T L+ + + Y
Sbjct: 799 YLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYA 858
Query: 183 ILLWG---TAAEVDTIFTLQKRAVRAIYNMGPRESLKNKFQEYDILTLPSQY 329
I WG T A++ I + R +R I G + Y + T+ Y
Sbjct: 859 IAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTKNQTIRDRYCVKTVEEFY 910
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 34.3 bits (75), Expect = 0.075
Identities = 28/112 (25%), Positives = 45/112 (40%), Gaps = 6/112 (5%)
Frame = +3
Query: 12 FLGITLDNKLQWGPHIKTLAGMLSSAAFAVRKI---RQLTDIATARLVYFAYFHSLMSYG 182
+LG+ LD+KL PH+ + G +A + I R T L+ + + Y
Sbjct: 761 YLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYA 820
Query: 183 ILLWG---TAAEVDTIFTLQKRAVRAIYNMGPRESLKNKFQEYDILTLPSQY 329
I WG T A++ I + R +R I G + Y + T+ Y
Sbjct: 821 IAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTKNQTIRDRYCVKTVEEFY 872
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 34.3 bits (75), Expect = 0.075
Identities = 28/112 (25%), Positives = 45/112 (40%), Gaps = 6/112 (5%)
Frame = +3
Query: 12 FLGITLDNKLQWGPHIKTLAGMLSSAAFAVRKI---RQLTDIATARLVYFAYFHSLMSYG 182
+LG+ LD+KL PH+ + G +A + I R T L+ + + Y
Sbjct: 799 YLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYA 858
Query: 183 ILLWG---TAAEVDTIFTLQKRAVRAIYNMGPRESLKNKFQEYDILTLPSQY 329
I WG T A++ I + R +R I G + Y + T+ Y
Sbjct: 859 IAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTKNQTIRDRYCVKTVEEFY 910
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 33.5 bits (73), Expect = 0.13
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Frame = +3
Query: 12 FLGITLDNKLQWGPHIKTLAGMLSSAAFAVR-KIRQLTDIATAR--LVYFAYFHSLMSYG 182
+LG+ LD +L W HI+ L A + I + ++ L+Y + + +YG
Sbjct: 740 YLGVHLDRRLTWRRHIEAKKTQLKLKANNLHWLINSGSPLSLDHKVLLYNSILKPIWTYG 799
Query: 183 ILLWGTA--AEVDTIFTLQKRAVRAI 254
LWG A + +D I Q + +R I
Sbjct: 800 SQLWGNASNSNIDIIQRAQSKILRTI 825
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 32.3 bits (70), Expect = 0.30
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = +3
Query: 15 LGITLDNKLQWGPHIKTLAGMLSSAAFAVRKIRQL---TDIATARLVYFAYFHSLMSYGI 185
LGITL+NK +W HI L L + ++ + L + T V A + + YG+
Sbjct: 740 LGITLNNKYKWNTHINLLLPKLHNKLNIIKCLSSLKFNCNTHTLLNVAKATIIAKLEYGL 799
Query: 186 LLWGTA 203
L+G A
Sbjct: 800 FLYGHA 805
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 30.3 bits (65), Expect = 1.2
Identities = 33/129 (25%), Positives = 62/129 (48%), Gaps = 6/129 (4%)
Frame = +3
Query: 12 FLGITLDNKLQWGPHIKTLAGMLSSAAFAVRKI---RQLTDIATARLVYFAYFHSLMSYG 182
+LGITLD KL + HI + + + + R + +Y + + YG
Sbjct: 554 YLGITLDRKLTFSRHITNIQQAFRTKVARMSWLIAPRNKLSLGCKVNIYKSILAPCLFYG 613
Query: 183 ILLWGTAAE--VDTIFTLQKRAVRAIYNMGPRESLKNKFQEYDILTLPSQYIFDNLMHI- 353
+ ++G AA+ ++ I LQ + +R I G ++ + E D L +P + D L +I
Sbjct: 614 LQVYGIAAKSHLNKIRILQAKTLRRI--SGAPWYMRTRDIERD-LKVPK--LGDKLQNIA 668
Query: 354 RKNLDKLDL 380
+K L++L++
Sbjct: 669 QKYLERLNV 677
>AE014297-3620|AAF56330.3| 1954|Drosophila melanogaster CG6875-PA
protein.
Length = 1954
Score = 30.3 bits (65), Expect = 1.2
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Frame = +3
Query: 57 IKTLAG-MLSSAAFAV-RKIRQLTDIATARLVYFAYFHSLMSYGILLWGTAAEVDTIFTL 230
++ L G ++S A AV ++ +L+ L++ + F S YGI+ +EVD L
Sbjct: 1743 VRFLRGRFIASDALAVLSRLDRLSRTVPHLLMWCSEFMSTFCYGIMAQAIRSEVDK--QL 1800
Query: 231 QKRAVRAIYNMGPRESLK-NKFQEYDILTL 317
+R R I N+ S N FQE ++T+
Sbjct: 1801 IERCSRIILNLARYNSTTVNTFQEGGLVTI 1830
>U95171-1|AAB51540.1| 1861|Drosophila melanogaster microtubule
associated protein protein.
Length = 1861
Score = 29.9 bits (64), Expect = 1.6
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Frame = +3
Query: 57 IKTLAG-MLSSAAFAV-RKIRQLTDIATARLVYFAYFHSLMSYGILLWGTAAEVDTIFTL 230
++ L G ++S A AV ++ +L+ L++ + F S YGI+ +EVD L
Sbjct: 1650 VRFLRGRFIASDALAVLSQLDRLSRTVPHLLMWCSEFMSTFCYGIMAQAIRSEVDK--QL 1707
Query: 231 QKRAVRAIYNMGPRESLK-NKFQEYDILTL 317
+R R I N+ S N FQE ++T+
Sbjct: 1708 IERCSRIILNLARYNSTTVNTFQEGGLVTI 1737
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 29.9 bits (64), Expect = 1.6
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Frame = +3
Query: 12 FLGITLDNKLQWGPHIKTLAGMLSSAAFAVRKI---RQLTDIATARLVYFAYFHSLMSYG 182
+LGITLD KL + HI + + + + R + +Y + + YG
Sbjct: 752 YLGITLDRKLTFSRHITNIQQAFRTKVARMSWLIAPRNKLSLGCKVNIYKSILAPCLFYG 811
Query: 183 ILLWGTAAE--VDTIFTLQKRAVRAI 254
+ ++G AA+ ++ I LQ + +R I
Sbjct: 812 LQVYGIAAKSHLNKIRILQAKTLRRI 837
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/89 (20%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Frame = +3
Query: 12 FLGITLDNKLQWGPHIKTL---AGMLSSAAFAVRKIRQLTDIATARLVYFAYFHSLMSYG 182
+LGI D KL + HI + + + + I+ +++ F+ ++ YG
Sbjct: 772 YLGIIFDKKLTFKYHINNTIMKVNKIICTLYPLINRKSKLSISNKIIIFKTIFNPILMYG 831
Query: 183 ILLWGTAAE--VDTIFTLQKRAVRAIYNM 263
+WG A+ + + Q + ++ I N+
Sbjct: 832 SPVWGRCAQTHIKKLQICQNKLLKLIMNL 860
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/89 (20%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Frame = +3
Query: 12 FLGITLDNKLQWGPHIKTL---AGMLSSAAFAVRKIRQLTDIATARLVYFAYFHSLMSYG 182
+LGI D KL + HI + + + + I+ +++ F+ ++ YG
Sbjct: 720 YLGIIFDKKLTFKYHINNTIMKVNKIICTLYPLINRKSKLSISNKIIIFKTIFNPILMYG 779
Query: 183 ILLWGTAAE--VDTIFTLQKRAVRAIYNM 263
+WG A+ + + Q + ++ I N+
Sbjct: 780 SPVWGRCAQTHIKKLQICQNKLLKLIMNL 808
>AY075330-1|AAL68197.1| 867|Drosophila melanogaster GH11924p
protein.
Length = 867
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/64 (21%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Frame = +3
Query: 45 WGPHIKTLAGMLSSAAFAVRKIRQLTDIATARLVYFA--YFHSLMSYGILLWGTAAEVDT 218
WGP I+++ + FA+R TDI + Y + F + +L + +D
Sbjct: 580 WGPAIESILSKCPTMKFAIRNCLTFTDITAGKDFYVSRRKFEDFRKFQDILRNDCSPLDA 639
Query: 219 IFTL 230
+ +
Sbjct: 640 VLVM 643
>AE013599-1633|AAF58426.1| 867|Drosophila melanogaster CG13326-PA
protein.
Length = 867
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/64 (21%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Frame = +3
Query: 45 WGPHIKTLAGMLSSAAFAVRKIRQLTDIATARLVYFA--YFHSLMSYGILLWGTAAEVDT 218
WGP I+++ + FA+R TDI + Y + F + +L + +D
Sbjct: 580 WGPAIESILSKCPTMKFAIRNCLTFTDITAGKDFYVSRRKFEDFRKFQDILRNDCSPLDA 639
Query: 219 IFTL 230
+ +
Sbjct: 640 VLVM 643
>AF220096-1|AAF26436.1| 380|Drosophila melanogaster homeobox
protein Scarecrow protein.
Length = 380
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/64 (21%), Positives = 30/64 (46%)
Frame = +3
Query: 231 QKRAVRAIYNMGPRESLKNKFQEYDILTLPSQYIFDNLMHIRKNLDKLDLVNDRHNLNTR 410
Q+R R ++ L+ +F++ L+ P + +L+H+ K+ N R+ +
Sbjct: 164 QRRKRRVLFTQAQVYELERRFKQQRYLSAPEREHLASLIHLTPTQVKIWFQNHRYKCKRQ 223
Query: 411 SKDK 422
+K K
Sbjct: 224 AKRK 227
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,908,627
Number of Sequences: 53049
Number of extensions: 322613
Number of successful extensions: 760
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 756
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1417837128
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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