Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_N03
(383 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L19527-1|AAA19815.1| 136|Homo sapiens ribosomal protein L27 pro... 165 6e-41
L05094-1|AAC15857.1| 136|Homo sapiens ribosomal protein L27 pro... 165 6e-41
BC098560-1|AAH98560.1| 136|Homo sapiens ribosomal protein L27 p... 165 6e-41
BC021886-1|AAH21886.1| 140|Homo sapiens RPL27 protein protein. 165 6e-41
BC010026-1|AAH10026.1| 136|Homo sapiens ribosomal protein L27 p... 165 6e-41
BC007273-1|AAH07273.1| 136|Homo sapiens ribosomal protein L27 p... 165 6e-41
BC002588-1|AAH02588.1| 136|Homo sapiens ribosomal protein L27 p... 165 6e-41
BC001700-1|AAH01700.1| 136|Homo sapiens ribosomal protein L27 p... 165 6e-41
AB061851-1|BAB79492.1| 136|Homo sapiens ribosomal protein L27 p... 165 6e-41
U25752-1|AAA93226.1| 40|Homo sapiens ribosomal protein L27 pro... 60 2e-09
BC058014-1|AAH58014.1| 332|Homo sapiens C12orf29 protein protein. 29 6.8
BC035136-1|AAH35136.2| 323|Homo sapiens C12orf29 protein protein. 29 6.8
AJ626861-1|CAF25188.1| 3628|Homo sapiens VPS13C-2B protein protein. 29 6.8
AJ608771-1|CAE75583.1| 3753|Homo sapiens VPS13C-2A protein protein. 29 6.8
AB037842-1|BAA92659.1| 1463|Homo sapiens KIAA1421 protein protein. 29 6.8
AF077517-1|AAC70866.1| 100|Homo sapiens immunoglobulin heavy ch... 28 8.9
>L19527-1|AAA19815.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 165 bits (400), Expect = 6e-41
Identities = 78/114 (68%), Positives = 90/114 (78%), Gaps = 2/114 (1%)
Frame = -1
Query: 383 AIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKGVNYNHLMP 204
A++VKN D+GTSD+PY HA VAGIDRYPRKV MGK KI KRSKIK FVK NYNHLMP
Sbjct: 23 AVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMP 82
Query: 203 TRYSVDFSFEKFSA-KDL-KDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 48
TRYSVD +K KD+ +DPA ++K R +V+FEERYK+GKNKWFFQKLRF
Sbjct: 83 TRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136
>L05094-1|AAC15857.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 165 bits (400), Expect = 6e-41
Identities = 78/114 (68%), Positives = 90/114 (78%), Gaps = 2/114 (1%)
Frame = -1
Query: 383 AIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKGVNYNHLMP 204
A++VKN D+GTSD+PY HA VAGIDRYPRKV MGK KI KRSKIK FVK NYNHLMP
Sbjct: 23 AVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMP 82
Query: 203 TRYSVDFSFEKFSA-KDL-KDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 48
TRYSVD +K KD+ +DPA ++K R +V+FEERYK+GKNKWFFQKLRF
Sbjct: 83 TRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136
>BC098560-1|AAH98560.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 165 bits (400), Expect = 6e-41
Identities = 78/114 (68%), Positives = 90/114 (78%), Gaps = 2/114 (1%)
Frame = -1
Query: 383 AIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKGVNYNHLMP 204
A++VKN D+GTSD+PY HA VAGIDRYPRKV MGK KI KRSKIK FVK NYNHLMP
Sbjct: 23 AVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMP 82
Query: 203 TRYSVDFSFEKFSA-KDL-KDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 48
TRYSVD +K KD+ +DPA ++K R +V+FEERYK+GKNKWFFQKLRF
Sbjct: 83 TRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136
>BC021886-1|AAH21886.1| 140|Homo sapiens RPL27 protein protein.
Length = 140
Score = 165 bits (400), Expect = 6e-41
Identities = 78/114 (68%), Positives = 90/114 (78%), Gaps = 2/114 (1%)
Frame = -1
Query: 383 AIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKGVNYNHLMP 204
A++VKN D+GTSD+PY HA VAGIDRYPRKV MGK KI KRSKIK FVK NYNHLMP
Sbjct: 27 AVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMP 86
Query: 203 TRYSVDFSFEKFSA-KDL-KDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 48
TRYSVD +K KD+ +DPA ++K R +V+FEERYK+GKNKWFFQKLRF
Sbjct: 87 TRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 140
>BC010026-1|AAH10026.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 165 bits (400), Expect = 6e-41
Identities = 78/114 (68%), Positives = 90/114 (78%), Gaps = 2/114 (1%)
Frame = -1
Query: 383 AIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKGVNYNHLMP 204
A++VKN D+GTSD+PY HA VAGIDRYPRKV MGK KI KRSKIK FVK NYNHLMP
Sbjct: 23 AVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMP 82
Query: 203 TRYSVDFSFEKFSA-KDL-KDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 48
TRYSVD +K KD+ +DPA ++K R +V+FEERYK+GKNKWFFQKLRF
Sbjct: 83 TRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136
>BC007273-1|AAH07273.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 165 bits (400), Expect = 6e-41
Identities = 78/114 (68%), Positives = 90/114 (78%), Gaps = 2/114 (1%)
Frame = -1
Query: 383 AIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKGVNYNHLMP 204
A++VKN D+GTSD+PY HA VAGIDRYPRKV MGK KI KRSKIK FVK NYNHLMP
Sbjct: 23 AVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMP 82
Query: 203 TRYSVDFSFEKFSA-KDL-KDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 48
TRYSVD +K KD+ +DPA ++K R +V+FEERYK+GKNKWFFQKLRF
Sbjct: 83 TRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136
>BC002588-1|AAH02588.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 165 bits (400), Expect = 6e-41
Identities = 78/114 (68%), Positives = 90/114 (78%), Gaps = 2/114 (1%)
Frame = -1
Query: 383 AIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKGVNYNHLMP 204
A++VKN D+GTSD+PY HA VAGIDRYPRKV MGK KI KRSKIK FVK NYNHLMP
Sbjct: 23 AVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMP 82
Query: 203 TRYSVDFSFEKFSA-KDL-KDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 48
TRYSVD +K KD+ +DPA ++K R +V+FEERYK+GKNKWFFQKLRF
Sbjct: 83 TRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136
>BC001700-1|AAH01700.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 165 bits (400), Expect = 6e-41
Identities = 78/114 (68%), Positives = 90/114 (78%), Gaps = 2/114 (1%)
Frame = -1
Query: 383 AIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKGVNYNHLMP 204
A++VKN D+GTSD+PY HA VAGIDRYPRKV MGK KI KRSKIK FVK NYNHLMP
Sbjct: 23 AVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMP 82
Query: 203 TRYSVDFSFEKFSA-KDL-KDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 48
TRYSVD +K KD+ +DPA ++K R +V+FEERYK+GKNKWFFQKLRF
Sbjct: 83 TRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136
>AB061851-1|BAB79492.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 165 bits (400), Expect = 6e-41
Identities = 78/114 (68%), Positives = 90/114 (78%), Gaps = 2/114 (1%)
Frame = -1
Query: 383 AIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKGVNYNHLMP 204
A++VKN D+GTSD+PY HA VAGIDRYPRKV MGK KI KRSKIK FVK NYNHLMP
Sbjct: 23 AVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMP 82
Query: 203 TRYSVDFSFEKFSA-KDL-KDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 48
TRYSVD +K KD+ +DPA ++K R +V+FEERYK+GKNKWFFQKLRF
Sbjct: 83 TRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136
>U25752-1|AAA93226.1| 40|Homo sapiens ribosomal protein L27
protein.
Length = 40
Score = 60.5 bits (140), Expect = 2e-09
Identities = 26/39 (66%), Positives = 33/39 (84%), Gaps = 1/39 (2%)
Frame = -1
Query: 161 KDL-KDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 48
KD+ +DPA ++K R +V+FEERYK+GKNKWFFQKLRF
Sbjct: 2 KDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 40
>BC058014-1|AAH58014.1| 332|Homo sapiens C12orf29 protein protein.
Length = 332
Score = 28.7 bits (61), Expect = 6.8
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -1
Query: 359 EGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPF 237
+G SD+PY A +DR P K ++ KN +H + K F
Sbjct: 73 KGASDQPY---LWARLDRKPNKQAEKRFKNFLHSKENPKEF 110
>BC035136-1|AAH35136.2| 323|Homo sapiens C12orf29 protein protein.
Length = 323
Score = 28.7 bits (61), Expect = 6.8
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -1
Query: 359 EGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPF 237
+G SD+PY A +DR P K ++ KN +H + K F
Sbjct: 64 KGASDQPY---LWARLDRKPNKQAEKRFKNFLHSKENPKEF 101
>AJ626861-1|CAF25188.1| 3628|Homo sapiens VPS13C-2B protein protein.
Length = 3628
Score = 28.7 bits (61), Expect = 6.8
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = -1
Query: 326 FVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSAKDLKD 147
F+ G++ + K K K K HK+ KPF KG++ + P D EK + + +K+
Sbjct: 135 FIYGLENFVYKDIKPGRKRKKHKKHFKKPF-KGLDRSKDKPKEAKKDTFVEKLATQVIKN 193
>AJ608771-1|CAE75583.1| 3753|Homo sapiens VPS13C-2A protein protein.
Length = 3753
Score = 28.7 bits (61), Expect = 6.8
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = -1
Query: 326 FVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSAKDLKD 147
F+ G++ + K K K K HK+ KPF KG++ + P D EK + + +K+
Sbjct: 135 FIYGLENFVYKDIKPGRKRKKHKKHFKKPF-KGLDRSKDKPKEAKKDTFVEKLATQVIKN 193
>AB037842-1|BAA92659.1| 1463|Homo sapiens KIAA1421 protein protein.
Length = 1463
Score = 28.7 bits (61), Expect = 6.8
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = -1
Query: 326 FVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSAKDLKD 147
F+ G++ + K K K K HK+ KPF KG++ + P D EK + + +K+
Sbjct: 159 FIYGLENFVYKDIKPGRKRKKHKKHFKKPF-KGLDRSKDKPKEAKKDTFVEKLATQVIKN 217
>AF077517-1|AAC70866.1| 100|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 100
Score = 28.3 bits (60), Expect = 8.9
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = -1
Query: 224 NYNHLMPTRY--SVDFSFEKFSAKDLKDPAKRKKLRFNTRVRFEERYKSGKNKW 69
NYN + +R SVD S +FS K A + + R R + Y SG N W
Sbjct: 46 NYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARGRGRDGYNSGSNYW 99
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,809,712
Number of Sequences: 237096
Number of extensions: 995901
Number of successful extensions: 2163
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2148
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2583773550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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