Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_N01
(294 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X13382-1|CAA31759.1| 407|Drosophila melanogaster protein ( Dros... 153 4e-38
BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p pro... 153 4e-38
AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p pro... 153 4e-38
AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA... 153 4e-38
X06881-1|CAA29998.1| 123|Drosophila melanogaster protein ( Dros... 86 8e-18
BT010233-1|AAQ23551.1| 947|Drosophila melanogaster RE59472p pro... 32 0.14
BT003626-1|AAO39629.1| 947|Drosophila melanogaster GH01416p pro... 32 0.14
AY166752-1|AAN85714.1| 1400|Drosophila melanogaster loechrig iso... 32 0.14
AY070541-1|AAL48012.1| 1400|Drosophila melanogaster LD22662p pro... 32 0.14
AE014297-2948|AAF55864.2| 1400|Drosophila melanogaster CG17299-P... 32 0.14
AE014297-2944|AAF55860.2| 947|Drosophila melanogaster CG17299-P... 32 0.14
AE014297-2943|AAN13851.1| 947|Drosophila melanogaster CG17299-P... 32 0.14
AY071142-1|AAL48764.1| 572|Drosophila melanogaster RE17942p pro... 30 0.57
AF223064-1|AAF34687.1| 571|Drosophila melanogaster putative mic... 30 0.57
AE014297-195|AAF52059.2| 572|Drosophila melanogaster CG10229-PA... 30 0.57
AE014298-3010|AAF50913.2| 4899|Drosophila melanogaster CG11734-P... 27 5.4
AJ487522-1|CAD31790.1| 1836|Drosophila melanogaster Polehole pro... 26 7.1
AE014296-3066|AAF49225.1| 265|Drosophila melanogaster CG6865-PA... 26 7.1
U83493-1|AAC47652.1| 732|Drosophila melanogaster MCM5 homolog p... 26 9.4
AY071692-1|AAL49314.1| 493|Drosophila melanogaster RH13838p pro... 26 9.4
AY071628-1|AAL49250.1| 733|Drosophila melanogaster RE67590p pro... 26 9.4
AY071544-1|AAL49166.1| 493|Drosophila melanogaster RE57978p pro... 26 9.4
AE014297-3534|AAF56288.3| 493|Drosophila melanogaster CG18528-P... 26 9.4
AE014297-1202|AAF54557.1| 733|Drosophila melanogaster CG4082-PA... 26 9.4
>X13382-1|CAA31759.1| 407|Drosophila melanogaster protein (
Drosophila melanogastermRNA for put. ribosomal protein
L1. ).
Length = 407
Score = 153 bits (371), Expect = 4e-38
Identities = 71/94 (75%), Positives = 80/94 (85%)
Frame = +3
Query: 12 ARPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQT 191
ARPLVSVY+EK+E ++ LP VFKAPIRPD+VN+VH + +N RQ Y VS+ AGHQT
Sbjct: 6 ARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSELAGHQT 65
Query: 192 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMC 293
SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMC
Sbjct: 66 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMC 99
>BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p
protein.
Length = 233
Score = 153 bits (371), Expect = 4e-38
Identities = 71/94 (75%), Positives = 80/94 (85%)
Frame = +3
Query: 12 ARPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQT 191
ARPLVSVY+EK+E ++ LP VFKAPIRPD+VN+VH + +N RQ Y VS+ AGHQT
Sbjct: 6 ARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSELAGHQT 65
Query: 192 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMC 293
SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMC
Sbjct: 66 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMC 99
>AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p
protein.
Length = 401
Score = 153 bits (371), Expect = 4e-38
Identities = 71/94 (75%), Positives = 80/94 (85%)
Frame = +3
Query: 12 ARPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQT 191
ARPLVSVY+EK+E ++ LP VFKAPIRPD+VN+VH + +N RQ Y VS+ AGHQT
Sbjct: 6 ARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSELAGHQT 65
Query: 192 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMC 293
SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMC
Sbjct: 66 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMC 99
>AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA
protein.
Length = 401
Score = 153 bits (371), Expect = 4e-38
Identities = 71/94 (75%), Positives = 80/94 (85%)
Frame = +3
Query: 12 ARPLVSVYSEKSEVVAGASLPLPFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQT 191
ARPLVSVY+EK+E ++ LP VFKAPIRPD+VN+VH + +N RQ Y VS+ AGHQT
Sbjct: 6 ARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSELAGHQT 65
Query: 192 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMC 293
SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMC
Sbjct: 66 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMC 99
>X06881-1|CAA29998.1| 123|Drosophila melanogaster protein (
Drosophila gene forribosomal protein L1 fragment. ).
Length = 123
Score = 85.8 bits (203), Expect = 8e-18
Identities = 37/37 (100%), Positives = 37/37 (100%)
Frame = +3
Query: 183 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMC 293
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMC
Sbjct: 1 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMC 37
>BT010233-1|AAQ23551.1| 947|Drosophila melanogaster RE59472p
protein.
Length = 947
Score = 31.9 bits (69), Expect = 0.14
Identities = 21/69 (30%), Positives = 27/69 (39%)
Frame = +3
Query: 78 PFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGT 257
P +F RP +D K+ P A T + S GTG A + GG
Sbjct: 228 PTIFDV-FRPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPATSSAAGGAGGAA 286
Query: 258 HRSGQGAFG 284
+GQGA G
Sbjct: 287 AAAGQGAAG 295
>BT003626-1|AAO39629.1| 947|Drosophila melanogaster GH01416p
protein.
Length = 947
Score = 31.9 bits (69), Expect = 0.14
Identities = 21/69 (30%), Positives = 27/69 (39%)
Frame = +3
Query: 78 PFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGT 257
P +F RP +D K+ P A T + S GTG A + GG
Sbjct: 228 PTIFDV-FRPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPATSSAAGGAGGAA 286
Query: 258 HRSGQGAFG 284
+GQGA G
Sbjct: 287 AAAGQGAAG 295
>AY166752-1|AAN85714.1| 1400|Drosophila melanogaster loechrig
isoform I protein.
Length = 1400
Score = 31.9 bits (69), Expect = 0.14
Identities = 21/69 (30%), Positives = 27/69 (39%)
Frame = +3
Query: 78 PFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGT 257
P +F RP +D K+ P A T + S GTG A + GG
Sbjct: 681 PTIFDV-FRPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPATSSAAGGAGGAA 739
Query: 258 HRSGQGAFG 284
+GQGA G
Sbjct: 740 AAAGQGAAG 748
>AY070541-1|AAL48012.1| 1400|Drosophila melanogaster LD22662p
protein.
Length = 1400
Score = 31.9 bits (69), Expect = 0.14
Identities = 21/69 (30%), Positives = 27/69 (39%)
Frame = +3
Query: 78 PFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGT 257
P +F RP +D K+ P A T + S GTG A + GG
Sbjct: 681 PTIFDV-FRPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPATSSAAGGAGGAA 739
Query: 258 HRSGQGAFG 284
+GQGA G
Sbjct: 740 AAAGQGAAG 748
>AE014297-2948|AAF55864.2| 1400|Drosophila melanogaster CG17299-PF,
isoform F protein.
Length = 1400
Score = 31.9 bits (69), Expect = 0.14
Identities = 21/69 (30%), Positives = 27/69 (39%)
Frame = +3
Query: 78 PFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGT 257
P +F RP +D K+ P A T + S GTG A + GG
Sbjct: 681 PTIFDV-FRPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPATSSAAGGAGGAA 739
Query: 258 HRSGQGAFG 284
+GQGA G
Sbjct: 740 AAAGQGAAG 748
>AE014297-2944|AAF55860.2| 947|Drosophila melanogaster CG17299-PB,
isoform B protein.
Length = 947
Score = 31.9 bits (69), Expect = 0.14
Identities = 21/69 (30%), Positives = 27/69 (39%)
Frame = +3
Query: 78 PFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGT 257
P +F RP +D K+ P A T + S GTG A + GG
Sbjct: 228 PTIFDV-FRPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPATSSAAGGAGGAA 286
Query: 258 HRSGQGAFG 284
+GQGA G
Sbjct: 287 AAAGQGAAG 295
>AE014297-2943|AAN13851.1| 947|Drosophila melanogaster CG17299-PA,
isoform A protein.
Length = 947
Score = 31.9 bits (69), Expect = 0.14
Identities = 21/69 (30%), Positives = 27/69 (39%)
Frame = +3
Query: 78 PFVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGT 257
P +F RP +D K+ P A T + S GTG A + GG
Sbjct: 228 PTIFDV-FRPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPATSSAAGGAGGAA 286
Query: 258 HRSGQGAFG 284
+GQGA G
Sbjct: 287 AAAGQGAAG 295
>AY071142-1|AAL48764.1| 572|Drosophila melanogaster RE17942p
protein.
Length = 572
Score = 29.9 bits (64), Expect = 0.57
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -3
Query: 274 PCPDLWVPPPRTRGIRATARPVPQDSAL 191
P PD+W PPP+ + +P P A+
Sbjct: 133 PDPDIWTPPPKDPDVWGPPKPPPTTQAV 160
>AF223064-1|AAF34687.1| 571|Drosophila melanogaster putative
microtubule severingprotein katanin p60 subunit protein.
Length = 571
Score = 29.9 bits (64), Expect = 0.57
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -3
Query: 274 PCPDLWVPPPRTRGIRATARPVPQDSAL 191
P PD+W PPP+ + +P P A+
Sbjct: 133 PDPDIWTPPPKDPDVWGPPKPPPTTQAV 160
>AE014297-195|AAF52059.2| 572|Drosophila melanogaster CG10229-PA
protein.
Length = 572
Score = 29.9 bits (64), Expect = 0.57
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -3
Query: 274 PCPDLWVPPPRTRGIRATARPVPQDSAL 191
P PD+W PPP+ + +P P A+
Sbjct: 133 PDPDIWTPPPKDPDVWGPPKPPPTTQAV 160
>AE014298-3010|AAF50913.2| 4899|Drosophila melanogaster CG11734-PB
protein.
Length = 4899
Score = 26.6 bits (56), Expect = 5.4
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -1
Query: 87 IQTGGGAKPLRRPHSSPNTPTLKVGLP 7
+ GGG P R SSP PT+ G+P
Sbjct: 2460 LSEGGGVPPNGRALSSPPQPTMVHGVP 2486
>AJ487522-1|CAD31790.1| 1836|Drosophila melanogaster Polehole
protein.
Length = 1836
Score = 26.2 bits (55), Expect = 7.1
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = -2
Query: 125 DIIDEVRSDGRLEYKREGERSPCDDLTLLRIHRH 24
D+I V+ G E + +P +DL+++++HRH
Sbjct: 390 DLIRTVQLGGVEEISNQVGAAPDEDLSVVQLHRH 423
>AE014296-3066|AAF49225.1| 265|Drosophila melanogaster CG6865-PA
protein.
Length = 265
Score = 26.2 bits (55), Expect = 7.1
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 153 QPYCVSKEAGHQTSAESWGT 212
QP CV E GH++ + +GT
Sbjct: 131 QPSCVGSEEGHRSLEQEYGT 150
>U83493-1|AAC47652.1| 732|Drosophila melanogaster MCM5 homolog
protein.
Length = 732
Score = 25.8 bits (54), Expect = 9.4
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 121 SLTRSGLMGALNTNGRGSEAPATTSLFSEYTDTKGRATL 5
S+ ++G+ LN+ R S A S+F + DTKG +
Sbjct: 464 SIAKAGITTTLNS--RCSVLAAANSIFGRWDDTKGEENI 500
>AY071692-1|AAL49314.1| 493|Drosophila melanogaster RH13838p
protein.
Length = 493
Score = 25.8 bits (54), Expect = 9.4
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +3
Query: 84 VFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGH 185
+F RPD+ D+ ++ SK C+ + GH
Sbjct: 442 IFLRDYRPDVYPDMAIAASKLRNSVRCIERITGH 475
>AY071628-1|AAL49250.1| 733|Drosophila melanogaster RE67590p
protein.
Length = 733
Score = 25.8 bits (54), Expect = 9.4
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 121 SLTRSGLMGALNTNGRGSEAPATTSLFSEYTDTKGRATL 5
S+ ++G+ LN+ R S A S+F + DTKG +
Sbjct: 465 SIAKAGITTTLNS--RCSVLAAANSIFGRWDDTKGEENI 501
>AY071544-1|AAL49166.1| 493|Drosophila melanogaster RE57978p
protein.
Length = 493
Score = 25.8 bits (54), Expect = 9.4
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +3
Query: 84 VFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGH 185
+F RPD+ D+ ++ SK C+ + GH
Sbjct: 442 IFLRDYRPDVYPDMAIAASKLRNSVRCIERITGH 475
>AE014297-3534|AAF56288.3| 493|Drosophila melanogaster CG18528-PA
protein.
Length = 493
Score = 25.8 bits (54), Expect = 9.4
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +3
Query: 84 VFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGH 185
+F RPD+ D+ ++ SK C+ + GH
Sbjct: 442 IFLRDYRPDVYPDMAIAASKLRNSVRCIERITGH 475
>AE014297-1202|AAF54557.1| 733|Drosophila melanogaster CG4082-PA
protein.
Length = 733
Score = 25.8 bits (54), Expect = 9.4
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 121 SLTRSGLMGALNTNGRGSEAPATTSLFSEYTDTKGRATL 5
S+ ++G+ LN+ R S A S+F + DTKG +
Sbjct: 465 SIAKAGITTTLNS--RCSVLAAANSIFGRWDDTKGEENI 501
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,913,758
Number of Sequences: 53049
Number of extensions: 248156
Number of successful extensions: 1066
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1066
length of database: 24,988,368
effective HSP length: 73
effective length of database: 21,115,791
effective search space used: 506778984
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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