Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_M23
(514 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 270 4e-73
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 269 1e-72
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 269 1e-72
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 242 1e-64
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 155 2e-38
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 155 2e-38
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 155 2e-38
03_01_0034 + 318432-318825,318902-319851 154 5e-38
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 153 6e-38
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 153 6e-38
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 137 4e-33
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 133 9e-32
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 111 3e-25
06_02_0189 - 12816751-12817088,12817272-12817330,12817745-128177... 30 0.95
06_03_0276 + 19087075-19087910,19089117-19089607,19089737-19091124 30 1.3
12_01_0468 + 3661177-3661626 29 1.7
04_04_0165 + 23247265-23247472,23248115-23248407,23249182-232492... 29 2.2
07_01_1049 - 9184559-9184888,9186534-9187003,9187279-9187342 29 2.9
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 28 3.8
01_06_0638 - 30768546-30768779,30768908-30769017,30769301-307694... 28 5.1
12_01_0269 + 1965126-1965169,1965398-1966064,1966181-1966693 27 8.8
07_03_0923 - 22617627-22617860,22618486-22618542,22618612-226187... 27 8.8
05_01_0162 - 1095020-1095202,1096114-1096188,1096939-1097039,109... 27 8.8
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 270 bits (662), Expect = 4e-73
Identities = 126/168 (75%), Positives = 144/168 (85%)
Frame = +3
Query: 9 IGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEF 188
+GKEIVDL LDR+RKLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL F
Sbjct: 110 VGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGF 169
Query: 189 AIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNR 368
IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNR
Sbjct: 170 TIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNR 229
Query: 369 LIGQIVSSITASLRFDGALNVDLTEFQTNLVP*PRIHFPLVTYAPVIS 512
LI QI+SS+T SLRFDGA+NVD+TEFQTNLVP PRIHF L +YAPVIS
Sbjct: 230 LISQIISSLTTSLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVIS 277
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 269 bits (659), Expect = 1e-72
Identities = 125/168 (74%), Positives = 144/168 (85%)
Frame = +3
Query: 9 IGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEF 188
IGKEIVDL LDRIRKLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL F
Sbjct: 110 IGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGF 169
Query: 189 AIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNR 368
+YP+PQVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNR
Sbjct: 170 TVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNR 229
Query: 369 LIGQIVSSITASLRFDGALNVDLTEFQTNLVP*PRIHFPLVTYAPVIS 512
L+ Q++SS+TASLRFDGALNVD+ EFQTNLVP PRIHF L +YAPVIS
Sbjct: 230 LVSQVISSLTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVIS 277
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 269 bits (659), Expect = 1e-72
Identities = 125/168 (74%), Positives = 144/168 (85%)
Frame = +3
Query: 9 IGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEF 188
IGKEIVDL LDRIRKLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL F
Sbjct: 110 IGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGF 169
Query: 189 AIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNR 368
+YP+PQVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNR
Sbjct: 170 TVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNR 229
Query: 369 LIGQIVSSITASLRFDGALNVDLTEFQTNLVP*PRIHFPLVTYAPVIS 512
L+ Q++SS+TASLRFDGALNVD+ EFQTNLVP PRIHF L +YAPVIS
Sbjct: 230 LVSQVISSLTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVIS 277
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 242 bits (592), Expect = 1e-64
Identities = 117/189 (61%), Positives = 143/189 (75%), Gaps = 21/189 (11%)
Frame = +3
Query: 9 IGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEF 188
+G+E+VDL LDR+RKLAD CTGLQGFL+F+ LL+ERLSVDYG+KSKL F
Sbjct: 170 VGREVVDLCLDRLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGRKSKLGF 229
Query: 189 AIYPAPQ---------------------VSTAVVEPYNSILTTHTTLEHSDCAFMVDNEA 305
IYP+PQ +STAVVEPYNS+L+TH+ +EH+D ++DNEA
Sbjct: 230 TIYPSPQYFFMSSSCMHIMSDTQISQCKISTAVVEPYNSVLSTHSLIEHTDVVVLLDNEA 289
Query: 306 IYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVP*PRIHFP 485
IYDIC+R+LDIERPTYTNLNRLI Q++SS+T SLRFDGA+NVD+TEFQTNLVP PRIHF
Sbjct: 290 IYDICKRSLDIERPTYTNLNRLISQVISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFM 349
Query: 486 LVTYAPVIS 512
L +YAP+IS
Sbjct: 350 LSSYAPIIS 358
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 155 bits (376), Expect = 2e-38
Identities = 71/167 (42%), Positives = 105/167 (62%)
Frame = +3
Query: 12 GKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFA 191
G E++D VLD +RK A+ C LQGF + H LL+ ++ +Y + L F+
Sbjct: 109 GAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFS 168
Query: 192 IYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRL 371
++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + PT+ +LN L
Sbjct: 169 VFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHL 228
Query: 372 IGQIVSSITASLRFDGALNVDLTEFQTNLVP*PRIHFPLVTYAPVIS 512
I +S +T LRF G LN DL + NL+P PR+HF +V +AP+ S
Sbjct: 229 ISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTS 275
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 155 bits (376), Expect = 2e-38
Identities = 71/167 (42%), Positives = 105/167 (62%)
Frame = +3
Query: 12 GKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFA 191
G E++D VLD +RK A+ C LQGF + H LL+ ++ +Y + L F+
Sbjct: 109 GAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFS 168
Query: 192 IYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRL 371
++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + PT+ +LN L
Sbjct: 169 VFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHL 228
Query: 372 IGQIVSSITASLRFDGALNVDLTEFQTNLVP*PRIHFPLVTYAPVIS 512
I +S +T LRF G LN DL + NL+P PR+HF +V +AP+ S
Sbjct: 229 ISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTS 275
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 155 bits (376), Expect = 2e-38
Identities = 71/167 (42%), Positives = 105/167 (62%)
Frame = +3
Query: 12 GKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFA 191
G E++D VLD +RK A+ C LQGF + H LL+ ++ +Y + L F+
Sbjct: 109 GAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFS 168
Query: 192 IYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRL 371
++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + PT+ +LN L
Sbjct: 169 VFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHL 228
Query: 372 IGQIVSSITASLRFDGALNVDLTEFQTNLVP*PRIHFPLVTYAPVIS 512
I +S +T LRF G LN DL + NL+P PR+HF +V +AP+ S
Sbjct: 229 ISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTS 275
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 154 bits (373), Expect = 5e-38
Identities = 70/167 (41%), Positives = 105/167 (62%)
Frame = +3
Query: 12 GKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFA 191
G E++D VLD +RK A+ C LQGF + H LL+ ++ +Y + L F+
Sbjct: 109 GAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFS 168
Query: 192 IYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRL 371
++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P++ +LN L
Sbjct: 169 VFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHL 228
Query: 372 IGQIVSSITASLRFDGALNVDLTEFQTNLVP*PRIHFPLVTYAPVIS 512
I +S +T LRF G LN DL + NL+P PR+HF +V +AP+ S
Sbjct: 229 ISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTS 275
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 153 bits (372), Expect = 6e-38
Identities = 70/167 (41%), Positives = 105/167 (62%)
Frame = +3
Query: 12 GKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFA 191
G E++D VLD +RK A+ C LQGF + H LL+ ++ +Y + L F+
Sbjct: 289 GAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFS 348
Query: 192 IYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRL 371
++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P++ +LN L
Sbjct: 349 VFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHL 408
Query: 372 IGQIVSSITASLRFDGALNVDLTEFQTNLVP*PRIHFPLVTYAPVIS 512
I +S +T LRF G LN DL + NL+P PR+HF +V +AP+ S
Sbjct: 409 ISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTS 455
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 153 bits (372), Expect = 6e-38
Identities = 70/167 (41%), Positives = 105/167 (62%)
Frame = +3
Query: 12 GKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFA 191
G E++D VLD +RK A+ C LQGF + H LL+ ++ +Y + L F+
Sbjct: 109 GAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFS 168
Query: 192 IYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRL 371
++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P++ +LN L
Sbjct: 169 VFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHL 228
Query: 372 IGQIVSSITASLRFDGALNVDLTEFQTNLVP*PRIHFPLVTYAPVIS 512
I +S +T LRF G LN DL + NL+P PR+HF +V +AP+ S
Sbjct: 229 ISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTS 275
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 137 bits (332), Expect = 4e-33
Identities = 70/183 (38%), Positives = 105/183 (57%), Gaps = 16/183 (8%)
Frame = +3
Query: 12 GKEIVDLVLDRIRKLADQCTGLQ----------------GFLIFHXXXXXXXXXXXXLLM 143
G E++D VLD +RK A+ C LQ GF + H LL+
Sbjct: 109 GAELIDSVLDVVRKEAENCDCLQDNRVIRQLGSIDNEQSGFQVCHSLGGGTGSGMGTLLI 168
Query: 144 ERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICR 323
++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC
Sbjct: 169 SKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICF 228
Query: 324 RNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVP*PRIHFPLVTYAP 503
R L + P++ +LN LI +S +T LRF G LN DL + NL+P PR+HF +V +AP
Sbjct: 229 RTLKLTNPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAP 288
Query: 504 VIS 512
+ S
Sbjct: 289 LTS 291
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 133 bits (321), Expect = 9e-32
Identities = 70/188 (37%), Positives = 105/188 (55%), Gaps = 21/188 (11%)
Frame = +3
Query: 12 GKEIVDLVLDRIRKLADQCTGLQG---------------------FLIFHXXXXXXXXXX 128
G E++D VLD +RK A+ C LQG F + H
Sbjct: 109 GAELIDSVLDVVRKEAENCDCLQGCRRLLEVHPLTCCESRNMMHGFQVCHSLGGGTGSGM 168
Query: 129 XXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAI 308
LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+
Sbjct: 169 GTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEAL 228
Query: 309 YDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVP*PRIHFPL 488
YDIC R L + P++ +LN LI +S +T LRF G LN DL + NL+P PR+HF +
Sbjct: 229 YDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFM 288
Query: 489 VTYAPVIS 512
V +AP+ S
Sbjct: 289 VGFAPLTS 296
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 111 bits (267), Expect = 3e-25
Identities = 54/166 (32%), Positives = 90/166 (54%), Gaps = 1/166 (0%)
Frame = +3
Query: 12 GKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFA 191
G+++VD ++D I + AD L+GF++ H L+E L+ Y KK ++
Sbjct: 111 GEQVVDDIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYS 170
Query: 192 IYPAP-QVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNR 368
++P + S VV+PYNS+LT ++DC ++DN A+ I L + PT+ N
Sbjct: 171 VFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLANPTFAQTNS 230
Query: 369 LIGQIVSSITASLRFDGALNVDLTEFQTNLVP*PRIHFPLVTYAPV 506
L+ ++S+ T +LR+ G +N DL +L+P PR HF + Y P+
Sbjct: 231 LVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPL 276
>06_02_0189 -
12816751-12817088,12817272-12817330,12817745-12817773,
12817808-12818013,12818245-12818329
Length = 238
Score = 30.3 bits (65), Expect = 0.95
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 285 FMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASL 407
F+ DN I D +R +E P + +L L QI+SS + L
Sbjct: 130 FLTDNSTIADTAKRRNFLEEPGHWSLRPLWTQIISSTSIDL 170
>06_03_0276 + 19087075-19087910,19089117-19089607,19089737-19091124
Length = 904
Score = 29.9 bits (64), Expect = 1.3
Identities = 22/109 (20%), Positives = 55/109 (50%), Gaps = 1/109 (0%)
Frame = -3
Query: 497 VRDQWEMDTWLGHQVG-LELR*IDIEGAVETQRGGNR*YDLADKTIEVGVGRAFNIQVTA 321
+++++++ T + ++ L+ D+ A+ ++ G+ DL D+ + + + +
Sbjct: 19 LKEEYKLQTGVREKINFLKSELEDMHAAL--RKVGSMHPDLLDEQVRIWASKVRELSYDM 76
Query: 320 ADVIDGFIVDHESTIGVFQGGVGCKDRVVGLYNSSGHLGCGIDSELQFR 174
DVID F+V + ++ GC +R+V H+ CG+ ++++ R
Sbjct: 77 EDVIDAFLVRVDGSV---PANPGCLERLV-------HMMCGLFTKIKVR 115
>12_01_0468 + 3661177-3661626
Length = 149
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -3
Query: 152 ESLHEERSETRTGATTERVEDEESLEACALVSEFADAVEDQ 30
E LH + E E VE+EE +E +V E + +E++
Sbjct: 56 EQLHSDEEEEEEEEEEEEVEEEEDIEEEEVVEEEEEEIEEE 96
>04_04_0165 +
23247265-23247472,23248115-23248407,23249182-23249239,
23249302-23250014
Length = 423
Score = 29.1 bits (62), Expect = 2.2
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -1
Query: 451 VWNSVRSTLRAPSKRREAVIDDTIWPIRRLRL 356
+WN+ S R R EA+ID T W IR ++
Sbjct: 313 LWNTGGSCNRTEPLREEAMIDQTEWAIRNAQV 344
>07_01_1049 - 9184559-9184888,9186534-9187003,9187279-9187342
Length = 287
Score = 28.7 bits (61), Expect = 2.9
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 322 AVTWILNARPTPTSIVLSARSYHRLPPLCVSTAP 423
+V W+ + P P+ + +A +HR PP AP
Sbjct: 98 SVAWLFDDYPPPSPVAAAAGMHHRQPPYDGVVAP 131
>11_06_0767 + 27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 28.3 bits (60), Expect = 3.8
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = -1
Query: 487 SGKWIRG*GTKLVWNSVRSTLRAPSKRREAVIDDTIWPIRRLR 359
S W R W+ RS R+PS+ R D P RR R
Sbjct: 1245 SRSWSRSRSRSRSWSRSRSRSRSPSRSRSRSYDQGAGPARRPR 1287
>01_06_0638 -
30768546-30768779,30768908-30769017,30769301-30769490,
30769842-30769914,30770007-30770063,30770147-30770211,
30770278-30770488,30770568-30770650,30771123-30771158,
30771611-30771713,30771813-30771899,30772210-30772403
Length = 480
Score = 27.9 bits (59), Expect = 5.1
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -3
Query: 80 LEACALVSEFADAVEDQVYDFLS 12
+ A AL+ E D VED + DFLS
Sbjct: 103 IHALALLDEIPDDVEDDIVDFLS 125
>12_01_0269 + 1965126-1965169,1965398-1966064,1966181-1966693
Length = 407
Score = 27.1 bits (57), Expect = 8.8
Identities = 17/41 (41%), Positives = 18/41 (43%)
Frame = +2
Query: 35 PRPHPQTR*PMHRPPGIPHLPLVRWWHRFWFHFSPHGATLR 157
P P P P PP P P R HR W F+PHG R
Sbjct: 330 PSPSPPFPSPPSPPPP-PTSPSPRQ-HRGWAIFAPHGGHAR 368
>07_03_0923 -
22617627-22617860,22618486-22618542,22618612-22618768,
22618875-22619014,22619642-22619777,22619874-22620142,
22620272-22620492,22620648-22620707,22620859-22620915,
22621008-22621405,22621929-22622000,22622098-22622169,
22622246-22622317,22622574-22622645,22622738-22622867,
22623065-22623170
Length = 750
Score = 27.1 bits (57), Expect = 8.8
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +1
Query: 298 MKPSMTS-AAVTWILNARPTPTSIVLSARSYHRLPPLCVSTAPSMSI*RSSRPTWCPSHV 474
+ PSM + A+T + + P TSI SA LPP + PS+S PT PS+
Sbjct: 162 LPPSMGNLTALTSLKDGNPFNTSIAPSA-----LPPAAPTPLPSVSPPAGHVPTKEPSNS 216
Query: 475 SIS 483
SI+
Sbjct: 217 SIA 219
>05_01_0162 -
1095020-1095202,1096114-1096188,1096939-1097039,
1097467-1097577,1097704-1097807,1098260-1098493,
1098583-1099304
Length = 509
Score = 27.1 bits (57), Expect = 8.8
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 35 PRPHPQTR*PMHRPPGIPHLP 97
PRPHP R H PP P P
Sbjct: 129 PRPHPDIRILAHAPPPAPPPP 149
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,762,099
Number of Sequences: 37544
Number of extensions: 350359
Number of successful extensions: 1075
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1039
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1073
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1106928780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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