Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_M23
         (514 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              26   0.26 
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    23   1.4  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    23   1.4  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    23   1.4  
AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           21   5.7  
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           21   5.7  
DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated...    21   9.9  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 25.8 bits (54), Expect = 0.26
 Identities = 10/35 (28%), Positives = 20/35 (57%)
 Frame = +2

Query: 350 LHQPQSSYRPDRIIDYRLSAFRRRPQCRSNGVPDQ 454
           LH  ++S +  +I+ Y  S  R++   + N +PD+
Sbjct: 164 LHMNRTSLKTSKIVSYPKSRSRKKGGLKDNLIPDK 198


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -3

Query: 161 VNGESLHEERSETRTGATTERVEDE 87
           V+ E+ H ERS  R+ A    ++DE
Sbjct: 254 VSSETNHNERSTPRSHAKPSLIDDE 278


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -3

Query: 161 VNGESLHEERSETRTGATTERVEDE 87
           V+ E+ H ERS  R+ A    ++DE
Sbjct: 254 VSSETNHNERSTPRSHAKPSLIDDE 278


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -3

Query: 161 VNGESLHEERSETRTGATTERVEDE 87
           V+ E+ H ERS  R+ A    ++DE
Sbjct: 254 VSSETNHNERSTPRSHAKPSLIDDE 278


>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 10/19 (52%), Positives = 11/19 (57%), Gaps = 2/19 (10%)
 Frame = +2

Query: 236 QLYPYNPHH--PGTLRLCF 286
           QL PYNP H  PG   L +
Sbjct: 61  QLKPYNPEHKPPGPKDLVY 79


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 10/19 (52%), Positives = 11/19 (57%), Gaps = 2/19 (10%)
 Frame = +2

Query: 236 QLYPYNPHH--PGTLRLCF 286
           QL PYNP H  PG   L +
Sbjct: 62  QLKPYNPEHKPPGPKDLVY 80


>DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 391

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +2

Query: 185 VRYLSRTPGVHCCCRALQLYP 247
           V+Y +R   +  C    QLYP
Sbjct: 104 VKYSARMHAIIACQMEFQLYP 124


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,546
Number of Sequences: 438
Number of extensions: 3314
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14232156
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)