Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_M21
(396 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical... 194 1e-50
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 194 1e-50
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 130 3e-31
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 120 5e-28
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 120 5e-28
Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical p... 118 2e-27
U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein. 118 2e-27
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 113 3e-26
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 113 3e-26
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 113 3e-26
Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical p... 108 2e-24
U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein. 108 2e-24
AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical ... 108 2e-24
AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical ... 92 2e-19
U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin cont... 84 4e-17
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 84 4e-17
AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock pr... 59 1e-09
L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein. 56 9e-09
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 30 0.52
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 28 2.1
Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical pr... 28 2.8
Z66520-2|CAA91387.1| 168|Caenorhabditis elegans Hypothetical pr... 28 2.8
Z82259-6|CAB97264.1| 339|Caenorhabditis elegans Hypothetical pr... 27 3.7
Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical pr... 27 6.4
Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical pr... 27 6.4
Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical pr... 27 6.4
U40942-8|AAC47073.2| 684|Caenorhabditis elegans Hypothetical pr... 27 6.4
AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical ... 27 6.4
AC006620-1|AAF39780.1| 754|Caenorhabditis elegans Hypothetical ... 27 6.4
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p... 26 8.5
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 26 8.5
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 26 8.5
>AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical
protein T10B5.5b protein.
Length = 455
Score = 194 bits (474), Expect = 1e-50
Identities = 86/124 (69%), Positives = 111/124 (89%)
Frame = +3
Query: 21 MQPQILLLREGTDQTQGKPQLISNINACQLVVDAVRTTLGPRGMDKLIVDHSGKAVISND 200
M+P I+LL++GT+ QGK Q+ISNINACQ+V D++RTTLGPRG+DKLIVD G ISND
Sbjct: 2 MRPPIILLKDGTENKQGKGQIISNINACQVVADSIRTTLGPRGLDKLIVDSKGATTISND 61
Query: 201 GATIMKLLDIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAGELLKRLRPFVEEGVHPRVI 380
GATI+KLLDIV PAA T+VDIA+SQDAEVGDGTTSVV+LA E+LK+++PF+E+GVHP+++
Sbjct: 62 GATILKLLDIVFPAASTMVDIARSQDAEVGDGTTSVVVLAAEILKQMKPFIEDGVHPQLL 121
Query: 381 VRAV 392
+RA+
Sbjct: 122 IRAI 125
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 194 bits (474), Expect = 1e-50
Identities = 86/124 (69%), Positives = 111/124 (89%)
Frame = +3
Query: 21 MQPQILLLREGTDQTQGKPQLISNINACQLVVDAVRTTLGPRGMDKLIVDHSGKAVISND 200
M+P I+LL++GT+ QGK Q+ISNINACQ+V D++RTTLGPRG+DKLIVD G ISND
Sbjct: 2 MRPPIILLKDGTENKQGKGQIISNINACQVVADSIRTTLGPRGLDKLIVDSKGATTISND 61
Query: 201 GATIMKLLDIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAGELLKRLRPFVEEGVHPRVI 380
GATI+KLLDIV PAA T+VDIA+SQDAEVGDGTTSVV+LA E+LK+++PF+E+GVHP+++
Sbjct: 62 GATILKLLDIVFPAASTMVDIARSQDAEVGDGTTSVVVLAAEILKQMKPFIEDGVHPQLL 121
Query: 381 VRAV 392
+RA+
Sbjct: 122 IRAI 125
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 130 bits (315), Expect = 3e-31
Identities = 56/124 (45%), Positives = 89/124 (71%)
Frame = +3
Query: 24 QPQILLLREGTDQTQGKPQLISNINACQLVVDAVRTTLGPRGMDKLIVDHSGKAVISNDG 203
Q I++L +GT + G I NINAC+ + D +RT+LGPR M K+++D G V++NDG
Sbjct: 6 QQPIIVLSQGTKRESGHQVQIGNINACKTIADVIRTSLGPRAMLKMLMDPMGGIVMTNDG 65
Query: 204 ATIMKLLDIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAGELLKRLRPFVEEGVHPRVIV 383
I++ + + HPAAK++++IA++QD E GDGTTSV+ILAGE++ + ++E+ HP +I+
Sbjct: 66 NAILREITVKHPAAKSMIEIARTQDEETGDGTTSVIILAGEVMAHAQTYLEQKTHPTLII 125
Query: 384 RAVR 395
+A R
Sbjct: 126 KAYR 129
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 120 bits (288), Expect = 5e-28
Identities = 56/114 (49%), Positives = 80/114 (70%), Gaps = 2/114 (1%)
Frame = +3
Query: 45 REGTDQTQGKPQLI--SNINACQLVVDAVRTTLGPRGMDKLIVDHSGKAVISNDGATIMK 218
RE + + KP+ + SNI A + V DAVRT+LGPRGMDK+I +G I+NDGATI+
Sbjct: 19 RERNFKDKDKPESVRNSNIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILN 78
Query: 219 LLDIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAGELLKRLRPFVEEGVHPRVI 380
+ ++HP AK LV+++K+QD E GDGTT+VV++AG LL + + +G+HP I
Sbjct: 79 QMSVIHPTAKMLVELSKAQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTI 132
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 120 bits (288), Expect = 5e-28
Identities = 56/114 (49%), Positives = 80/114 (70%), Gaps = 2/114 (1%)
Frame = +3
Query: 45 REGTDQTQGKPQLI--SNINACQLVVDAVRTTLGPRGMDKLIVDHSGKAVISNDGATIMK 218
RE + + KP+ + SNI A + V DAVRT+LGPRGMDK+I +G I+NDGATI+
Sbjct: 19 RERNFKDKDKPESVRNSNIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILN 78
Query: 219 LLDIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAGELLKRLRPFVEEGVHPRVI 380
+ ++HP AK LV+++K+QD E GDGTT+VV++AG LL + + +G+HP I
Sbjct: 79 QMSVIHPTAKMLVELSKAQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTI 132
>Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical
protein T05C12.7 protein.
Length = 549
Score = 118 bits (283), Expect = 2e-27
Identities = 54/112 (48%), Positives = 78/112 (69%)
Frame = +3
Query: 60 QTQGKPQLISNINACQLVVDAVRTTLGPRGMDKLIVDHSGKAVISNDGATIMKLLDIVHP 239
+T G+ N+ A + + V+++LGP G+DK++VD G +++NDGATI+K L++ HP
Sbjct: 15 RTTGQGIRSQNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEVEHP 74
Query: 240 AAKTLVDIAKSQDAEVGDGTTSVVILAGELLKRLRPFVEEGVHPRVIVRAVR 395
A K LV++A+ QD EVGDGTTSVVI+A ELLKR V++ VHP I+ R
Sbjct: 75 AGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYR 126
>U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein.
Length = 549
Score = 118 bits (283), Expect = 2e-27
Identities = 54/112 (48%), Positives = 78/112 (69%)
Frame = +3
Query: 60 QTQGKPQLISNINACQLVVDAVRTTLGPRGMDKLIVDHSGKAVISNDGATIMKLLDIVHP 239
+T G+ N+ A + + V+++LGP G+DK++VD G +++NDGATI+K L++ HP
Sbjct: 15 RTTGQGIRSQNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEVEHP 74
Query: 240 AAKTLVDIAKSQDAEVGDGTTSVVILAGELLKRLRPFVEEGVHPRVIVRAVR 395
A K LV++A+ QD EVGDGTTSVVI+A ELLKR V++ VHP I+ R
Sbjct: 75 AGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYR 126
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 113 bits (273), Expect = 3e-26
Identities = 53/117 (45%), Positives = 80/117 (68%), Gaps = 1/117 (0%)
Frame = +3
Query: 24 QPQILLL-REGTDQTQGKPQLISNINACQLVVDAVRTTLGPRGMDKLIVDHSGKAVISND 200
QP I++ +E + G + S+I A + V + +RT+LGPRG+DK++V G I+ND
Sbjct: 15 QPFIVMREQENQKRITGVEAVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITND 74
Query: 201 GATIMKLLDIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAGELLKRLRPFVEEGVHP 371
GATIM+ +D+ H AK +V+++KSQD E+GDGTT VV+LAG LL+ ++ G+HP
Sbjct: 75 GATIMEKMDVQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHP 131
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 113 bits (273), Expect = 3e-26
Identities = 53/117 (45%), Positives = 80/117 (68%), Gaps = 1/117 (0%)
Frame = +3
Query: 24 QPQILLL-REGTDQTQGKPQLISNINACQLVVDAVRTTLGPRGMDKLIVDHSGKAVISND 200
QP I++ +E + G + S+I A + V + +RT+LGPRG+DK++V G I+ND
Sbjct: 15 QPFIVMREQENQKRITGVEAVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITND 74
Query: 201 GATIMKLLDIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAGELLKRLRPFVEEGVHP 371
GATIM+ +D+ H AK +V+++KSQD E+GDGTT VV+LAG LL+ ++ G+HP
Sbjct: 75 GATIMEKMDVQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHP 131
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 113 bits (273), Expect = 3e-26
Identities = 53/117 (45%), Positives = 80/117 (68%), Gaps = 1/117 (0%)
Frame = +3
Query: 24 QPQILLL-REGTDQTQGKPQLISNINACQLVVDAVRTTLGPRGMDKLIVDHSGKAVISND 200
QP I++ +E + G + S+I A + V + +RT+LGPRG+DK++V G I+ND
Sbjct: 15 QPFIVMREQENQKRITGVEAVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITND 74
Query: 201 GATIMKLLDIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAGELLKRLRPFVEEGVHP 371
GATIM+ +D+ H AK +V+++KSQD E+GDGTT VV+LAG LL+ ++ G+HP
Sbjct: 75 GATIMEKMDVQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHP 131
>Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 108 bits (259), Expect = 2e-24
Identities = 50/125 (40%), Positives = 82/125 (65%), Gaps = 4/125 (3%)
Frame = +3
Query: 33 ILLLREGTDQTQGKPQLISNINACQLVVDAVRTTLGPRGMDKLIV----DHSGKAVISND 200
+ +L++ + +G+ +S+ + D V++TLGP+GMDK+++ + +G ++ND
Sbjct: 4 VQILKDNAQEERGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTND 63
Query: 201 GATIMKLLDIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAGELLKRLRPFVEEGVHPRVI 380
GATI+K + + +PAAK LVD++ +QD EVGDGTTSV +LA ELLK V + +HP+ I
Sbjct: 64 GATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTI 123
Query: 381 VRAVR 395
+ R
Sbjct: 124 ISGYR 128
>U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein.
Length = 529
Score = 108 bits (259), Expect = 2e-24
Identities = 50/125 (40%), Positives = 82/125 (65%), Gaps = 4/125 (3%)
Frame = +3
Query: 33 ILLLREGTDQTQGKPQLISNINACQLVVDAVRTTLGPRGMDKLIV----DHSGKAVISND 200
+ +L++ + +G+ +S+ + D V++TLGP+GMDK+++ + +G ++ND
Sbjct: 4 VQILKDNAQEERGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTND 63
Query: 201 GATIMKLLDIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAGELLKRLRPFVEEGVHPRVI 380
GATI+K + + +PAAK LVD++ +QD EVGDGTTSV +LA ELLK V + +HP+ I
Sbjct: 64 GATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTI 123
Query: 381 VRAVR 395
+ R
Sbjct: 124 ISGYR 128
>AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 108 bits (259), Expect = 2e-24
Identities = 50/125 (40%), Positives = 82/125 (65%), Gaps = 4/125 (3%)
Frame = +3
Query: 33 ILLLREGTDQTQGKPQLISNINACQLVVDAVRTTLGPRGMDKLIV----DHSGKAVISND 200
+ +L++ + +G+ +S+ + D V++TLGP+GMDK+++ + +G ++ND
Sbjct: 4 VQILKDNAQEERGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTND 63
Query: 201 GATIMKLLDIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAGELLKRLRPFVEEGVHPRVI 380
GATI+K + + +PAAK LVD++ +QD EVGDGTTSV +LA ELLK V + +HP+ I
Sbjct: 64 GATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTI 123
Query: 381 VRAVR 395
+ R
Sbjct: 124 ISGYR 128
>AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical
protein Y55F3AR.3 protein.
Length = 581
Score = 91.9 bits (218), Expect = 2e-19
Identities = 40/114 (35%), Positives = 70/114 (61%), Gaps = 1/114 (0%)
Frame = +3
Query: 42 LREGTDQTQGKPQLIS-NINACQLVVDAVRTTLGPRGMDKLIVDHSGKAVISNDGATIMK 218
++EG +G + + NI AC + +R+ GP GM+K++++H K ++ND ATI+K
Sbjct: 14 MKEGAQHFKGTDEAVQRNIEACTELASQIRSAYGPNGMNKMVINHIEKLFVTNDAATILK 73
Query: 219 LLDIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAGELLKRLRPFVEEGVHPRVI 380
L+I HPAA+ ++ + Q+ ++GD T +VVILA LL+ + G+ P+ +
Sbjct: 74 ELEIQHPAARIIIMATEMQEKQIGDNTNTVVILAAALLEHAANLIHMGMTPQEV 127
>U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform b protein.
Length = 429
Score = 83.8 bits (198), Expect = 4e-17
Identities = 38/97 (39%), Positives = 60/97 (61%)
Frame = +3
Query: 90 NINACQLVVDAVRTTLGPRGMDKLIVDHSGKAVISNDGATIMKLLDIVHPAAKTLVDIAK 269
NI+ + + D +R+ LGP+G K++V +G ++ DG ++ + I HP A + +
Sbjct: 23 NISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDGNVLLHEMAIQHPTASMIAKAST 82
Query: 270 SQDAEVGDGTTSVVILAGELLKRLRPFVEEGVHPRVI 380
+QD GDGTTS V+L GELLK+ V EG+HPR++
Sbjct: 83 AQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIV 119
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 83.8 bits (198), Expect = 4e-17
Identities = 38/97 (39%), Positives = 60/97 (61%)
Frame = +3
Query: 90 NINACQLVVDAVRTTLGPRGMDKLIVDHSGKAVISNDGATIMKLLDIVHPAAKTLVDIAK 269
NI+ + + D +R+ LGP+G K++V +G ++ DG ++ + I HP A + +
Sbjct: 23 NISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDGNVLLHEMAIQHPTASMIAKAST 82
Query: 270 SQDAEVGDGTTSVVILAGELLKRLRPFVEEGVHPRVI 380
+QD GDGTTS V+L GELLK+ V EG+HPR++
Sbjct: 83 AQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIV 119
>AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock
protein protein 60 protein.
Length = 568
Score = 58.8 bits (136), Expect = 1e-09
Identities = 35/113 (30%), Positives = 58/113 (51%), Gaps = 4/113 (3%)
Frame = +3
Query: 66 QGKPQLISNINACQLVVDAVRTTLGPRGMDKLIVDHSGKAVISNDGATIMKLLDI----V 233
+G+ ++ +N L+ DAV T+GP+G + +I G I+ DG T+ K +D+
Sbjct: 26 EGRQAMLVGVN---LLADAVSVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIDLKDKYQ 82
Query: 234 HPAAKTLVDIAKSQDAEVGDGTTSVVILAGELLKRLRPFVEEGVHPRVIVRAV 392
+ AK + D+A + E GDGTT +LA + K + +G + I R V
Sbjct: 83 NLGAKLIQDVANKANEEAGDGTTCATVLARAIAKEGFESIRQGGNAVEIRRGV 135
>L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein.
Length = 568
Score = 56.0 bits (129), Expect = 9e-09
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Frame = +3
Query: 66 QGKPQLISNINACQLVVDAVRTTLGPRGMDKLIVDHSGKAVISNDGATIMKLLDI----V 233
+G+ ++ +N L+ DAV T+GP+G + +I G I+ DG T+ K +D+
Sbjct: 26 EGRQAMLVGVN---LLADAVSVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIDLKDKYQ 82
Query: 234 HPAAKTLVDIAKSQDAEVGDGTTSVVILAGELLK 335
+ AK + D+A + E GDGTT +L + K
Sbjct: 83 NLGAKLIQDVANKANEEAGDGTTCATVLTRAIAK 116
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 30.3 bits (65), Expect = 0.52
Identities = 15/36 (41%), Positives = 26/36 (72%)
Frame = -3
Query: 382 TITLGWTPSSTNGLNLFRSSPAKITTDVVPSPTSAS 275
T+T+G T +ST+G ++ SSPA +T P+P+++S
Sbjct: 827 TVTVGSTEASTSGSSVASSSPAP-STSQNPNPSTSS 861
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 28.3 bits (60), Expect = 2.1
Identities = 25/94 (26%), Positives = 40/94 (42%)
Frame = -3
Query: 388 ARTITLGWTPSSTNGLNLFRSSPAKITTDVVPSPTSAS*DLAMSTKVFAAGCTISNSFMM 209
A + TLG + S+ + S+P T + SPT S L +S+ + T+ S +
Sbjct: 425 APSSTLGSSSSTIVSTTITPSTPKVSTLTLSQSPTPTSTPLVVSSSSSGSSSTVVTSTIT 484
Query: 208 VAPSFEITALPL*STISLSMPLGPSVVRTASTTS 107
+ T+ T S S P P TAS ++
Sbjct: 485 PSTQGVPTSTSNQPTPSTSNPTTPKSTVTASPST 518
>Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical
protein F53F1.3 protein.
Length = 283
Score = 27.9 bits (59), Expect = 2.8
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = +3
Query: 201 GATIMKLLDIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAGELLKRLRPFVEEGVHPRVI 380
G ++ +LD A L D AK + E G ++L LKR F+ +HP +
Sbjct: 23 GDQVLPVLDAALTAGYRLFDTAKVYNNEKEIGDALEILLPKHNLKREDIFITTKMHPNTV 82
>Z66520-2|CAA91387.1| 168|Caenorhabditis elegans Hypothetical
protein F49E12.2 protein.
Length = 168
Score = 27.9 bits (59), Expect = 2.8
Identities = 14/53 (26%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +3
Query: 228 IVHPAAKTLVDIAKSQDAEVGDGTT-SVVILAGELLKRLRPFVEEGVHPRVIV 383
I+H A +++ K + +G+ +I G L +RP++ +PRVI+
Sbjct: 33 IIHRDADEMIEFPKRSNDRLGETMIHGQIICHGTPLDYVRPYLSSKKYPRVII 85
>Z82259-6|CAB97264.1| 339|Caenorhabditis elegans Hypothetical
protein C28D4.7 protein.
Length = 339
Score = 27.5 bits (58), Expect = 3.7
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +2
Query: 95 QCLPTGC*CCPHNTWPKGHGQADSGS*RQSSDFK 196
QC+PT N W K HGQ D+G + S +K
Sbjct: 155 QCMPTSM-----NLWKKMHGQNDAGHIQNVSYYK 183
>Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical protein
C03D6.4 protein.
Length = 1390
Score = 26.6 bits (56), Expect = 6.4
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3
Query: 364 TPSSTNGLNLFRSSPAKITTDVVPSPTS 281
TPSS+N N+F A+ TT P+P S
Sbjct: 1081 TPSSSNSTNIF---GARTTTTATPTPAS 1105
>Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical protein
C46C2.1b protein.
Length = 1677
Score = 26.6 bits (56), Expect = 6.4
Identities = 19/71 (26%), Positives = 34/71 (47%)
Frame = -3
Query: 325 SPAKITTDVVPSPTSAS*DLAMSTKVFAAGCTISNSFMMVAPSFEITALPL*STISLSMP 146
SPA T+ + +PT A + + A+G I+ + +PS +A + ST + P
Sbjct: 854 SPAPFKTEDIQTPTLAQNTVPRTISTDASGLVINTPASIASPSPAPSATDVAST---TAP 910
Query: 145 LGPSVVRTAST 113
+ P+ T +T
Sbjct: 911 VTPAPTPTTTT 921
>Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical protein
C46C2.1a protein.
Length = 1838
Score = 26.6 bits (56), Expect = 6.4
Identities = 19/71 (26%), Positives = 34/71 (47%)
Frame = -3
Query: 325 SPAKITTDVVPSPTSAS*DLAMSTKVFAAGCTISNSFMMVAPSFEITALPL*STISLSMP 146
SPA T+ + +PT A + + A+G I+ + +PS +A + ST + P
Sbjct: 854 SPAPFKTEDIQTPTLAQNTVPRTISTDASGLVINTPASIASPSPAPSATDVAST---TAP 910
Query: 145 LGPSVVRTAST 113
+ P+ T +T
Sbjct: 911 VTPAPTPTTTT 921
>U40942-8|AAC47073.2| 684|Caenorhabditis elegans Hypothetical
protein K02E10.7 protein.
Length = 684
Score = 26.6 bits (56), Expect = 6.4
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = +3
Query: 171 HSGKAVISNDGATIMKLLDIVHPAAKTLVDIAKSQD 278
H ++G+T+ K++ I HPA ++ QD
Sbjct: 86 HDAVLTAHDEGSTLQKIISIEHPAIVQTFSVSHFQD 121
>AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical
protein Y79H2A.3a protein.
Length = 2129
Score = 26.6 bits (56), Expect = 6.4
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = -1
Query: 363 PLLQQTASISSEVHQLRLQPM*YHHRPQRPEIWQCRPKFLQPDALY 226
P+ QQ V Q + Q +++PQ+ + Q +P+F P + Y
Sbjct: 2070 PVYQQPTYQQPPVQQFQPQQQQQYYQPQQQALPQVQPQFQTPASSY 2115
>AC006620-1|AAF39780.1| 754|Caenorhabditis elegans Hypothetical
protein C51G7.3 protein.
Length = 754
Score = 26.6 bits (56), Expect = 6.4
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = -1
Query: 363 PLLQQTASISSEVHQLRLQPM*YHHRPQRPEIWQCRPKFLQPDALY 226
P+ QQ V Q + Q +++PQ+ + Q +P+F P + Y
Sbjct: 695 PVYQQPTYQQPPVQQFQPQQQQQYYQPQQQALPQVQPQFQTPASSY 740
>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
protein K07E12.1b protein.
Length = 12268
Score = 26.2 bits (55), Expect = 8.5
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +3
Query: 54 TDQTQGKPQLISNINACQLVVDAVRTTLGPRGMDKLIVDHSGKAVISNDGATI 212
TD+++ P + + L DA +GP G + + D SGK +S DG+ +
Sbjct: 6328 TDESEKTPYPVHGPDGTPLPTDASGAVIGPDG-EPIPTDASGKP-LSADGSPL 6378
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical
protein K07E12.1a protein.
Length = 13100
Score = 26.2 bits (55), Expect = 8.5
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +3
Query: 54 TDQTQGKPQLISNINACQLVVDAVRTTLGPRGMDKLIVDHSGKAVISNDGATI 212
TD+++ P + + L DA +GP G + + D SGK +S DG+ +
Sbjct: 6373 TDESEKTPYPVHGPDGTPLPTDASGAVIGPDG-EPIPTDASGKP-LSADGSPL 6423
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin
protein.
Length = 13100
Score = 26.2 bits (55), Expect = 8.5
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +3
Query: 54 TDQTQGKPQLISNINACQLVVDAVRTTLGPRGMDKLIVDHSGKAVISNDGATI 212
TD+++ P + + L DA +GP G + + D SGK +S DG+ +
Sbjct: 6373 TDESEKTPYPVHGPDGTPLPTDASGAVIGPDG-EPIPTDASGKP-LSADGSPL 6423
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,236,325
Number of Sequences: 27780
Number of extensions: 186455
Number of successful extensions: 456
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 451
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 609015246
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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