Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_M20
(501 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces po... 196 2e-51
SPAC8E11.02c |rad24||14-3-3 protein Rad24|Schizosaccharomyces po... 196 2e-51
SPAC2G11.14 |taf111|taf1, taf1, taf130|transcription factor TFII... 29 0.39
SPBC21.01 |mis17|SPBC776.19|kinetochore protein Mis17|Schizosacc... 28 0.69
SPCC364.02c |bis1||stress response protein Bis1|Schizosaccharomy... 28 0.91
SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5 |Schizo... 27 2.1
SPBC16C6.12c |||Las1-like protein|Schizosaccharomyces pombe|chr ... 26 2.8
SPCP1E11.03 |mug170||arrestin|Schizosaccharomyces pombe|chr 3|||... 26 3.7
SPBC530.13 |||cyclin Ctk2|Schizosaccharomyces pombe|chr 2|||Manual 25 4.8
SPACUNK4.14 |mdb1||BRCT domain protein|Schizosaccharomyces pombe... 25 4.8
SPAC1687.10 |mcp1||sequence orphan|Schizosaccharomyces pombe|chr... 25 4.8
SPAC1610.04 |mug99||meiotically upregulated gene Mug99|Schizosac... 25 4.8
SPBC16A3.17c |||membrane transporter|Schizosaccharomyces pombe|c... 25 6.4
SPAC1D4.10 |||tRNA endonuclease|Schizosaccharomyces pombe|chr 1|... 25 6.4
SPAC56F8.15 |||dubious|Schizosaccharomyces pombe|chr 1|||Manual 25 8.4
SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces... 25 8.4
SPBC1861.04c |||RNA-binding protein Prp24|Schizosaccharomyces po... 25 8.4
SPCC1672.07 |||U3 snoRNP-associated protein Utp21 |Schizosacchar... 25 8.4
>SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 196 bits (478), Expect = 2e-51
Identities = 95/135 (70%), Positives = 115/135 (85%)
Frame = +3
Query: 96 SEREDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARRA 275
+ RE++VY AKLAEQAERY+EMVE MK VA N ++L+VEERNLLSVAYKN+IGARRA
Sbjct: 3 NSRENSVYLAKLAEQAERYEEMVENMKKVACSN---DKLSVEERNLLSVAYKNIIGARRA 59
Query: 276 SWRIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILSVLDKHLIPSSQTGESK 455
SWRIISSIEQKEE++G + +I+ YR ++E EL DIC D+LSVL+KHLIP++ TGESK
Sbjct: 60 SWRIISSIEQKEESRGNTRQAALIKEYRKKIEDELSDICHDVLSVLEKHLIPAATTGESK 119
Query: 456 VFYYKMKGDYHRYLA 500
VFYYKMKGDY+RYLA
Sbjct: 120 VFYYKMKGDYYRYLA 134
>SPAC8E11.02c |rad24||14-3-3 protein Rad24|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 196 bits (478), Expect = 2e-51
Identities = 96/135 (71%), Positives = 115/135 (85%)
Frame = +3
Query: 96 SEREDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARRA 275
+ RED VY AKLAEQAERY+ MVE MK+VAS +D ELTVEERNLLSVAYKNVIGARRA
Sbjct: 4 TSREDAVYLAKLAEQAERYEGMVENMKSVAS---TDQELTVEERNLLSVAYKNVIGARRA 60
Query: 276 SWRIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILSVLDKHLIPSSQTGESK 455
SWRI+SSIEQKEE+KG ++ +I+ YR ++E+EL IC DIL+VL+KHLIP++ + ESK
Sbjct: 61 SWRIVSSIEQKEESKGNTAQVELIKEYRQKIEQELDTICQDILTVLEKHLIPNAASAESK 120
Query: 456 VFYYKMKGDYHRYLA 500
VFYYKMKGDY+RYLA
Sbjct: 121 VFYYKMKGDYYRYLA 135
>SPAC2G11.14 |taf111|taf1, taf1, taf130|transcription factor TFIID
complex subunit Taf111|Schizosaccharomyces pombe|chr
1|||Manual
Length = 979
Score = 29.1 bits (62), Expect = 0.39
Identities = 21/85 (24%), Positives = 38/85 (44%)
Frame = +3
Query: 111 NVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARRASWRII 290
N + +A+Q Y+E + + N R +S N NL +A K I + +
Sbjct: 779 NAHAYNVAKQQRAYEEEINRIWNAQKRGLSIN-------NLEELAKKYGINSIHDDYVES 831
Query: 291 SSIEQKEETKGAEDKLNMIRAYRSQ 365
+ +EET ++ L ++R YR +
Sbjct: 832 NEETTREETPSSDKVLRIVRLYRDK 856
>SPBC21.01 |mis17|SPBC776.19|kinetochore protein
Mis17|Schizosaccharomyces pombe|chr 2|||Manual
Length = 441
Score = 28.3 bits (60), Expect = 0.69
Identities = 23/100 (23%), Positives = 46/100 (46%)
Frame = +3
Query: 84 SSTMSEREDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIG 263
SST S N ++ Q+E Y ++ + + + ++SD E +E R V +N +
Sbjct: 45 SSTRSSPASNQQNLEIVSQSEAYHKISDLDDSTSIFSISDQENILERRISEEVVRENSV- 103
Query: 264 ARRASWRIISSIEQKEETKGAEDKLNMIRAYRSQVEKELR 383
+S +SS ET+ + + L + S +K+++
Sbjct: 104 ---SSIENVSSSAVARETQSSANILVKDNHFFSHKQKKIQ 140
>SPCC364.02c |bis1||stress response protein Bis1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 384
Score = 27.9 bits (59), Expect = 0.91
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -1
Query: 231 GSSPPPSAHCRKRCAKPRSSWLPPSR 154
GSSP S H R + P+ SW P R
Sbjct: 348 GSSPSASRHTALRTSIPKFSWTPTPR 373
>SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1065
Score = 26.6 bits (56), Expect = 2.1
Identities = 9/27 (33%), Positives = 19/27 (70%)
Frame = +3
Query: 339 NMIRAYRSQVEKELRDICSDILSVLDK 419
N +RA + +++K+L+D+ + +LDK
Sbjct: 243 NQLRADKKKLKKDLKDLVEEFQPILDK 269
Score = 24.6 bits (51), Expect = 8.4
Identities = 20/97 (20%), Positives = 48/97 (49%)
Frame = +3
Query: 135 EQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEE 314
+ ++R + E + A+ + DN++++EE L + NV S+ + +K+E
Sbjct: 814 QSSDRQTAITELNEEFATSSEVDNKISIEETKL---KFMNV-----NSYVMEQYDARKKE 865
Query: 315 TKGAEDKLNMIRAYRSQVEKELRDICSDILSVLDKHL 425
+ E K++ +++ E+ I D +S L++++
Sbjct: 866 IEELESKMSDFDQSVEELQDEMNSIKEDWVSKLEENV 902
>SPBC16C6.12c |||Las1-like protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 470
Score = 26.2 bits (55), Expect = 2.8
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -1
Query: 168 LPPSRHSAQPARLTWLYTHYL-PFRTLWMINDFSLTKT 58
LP R +AQ A L+WLY HY P T + + T+T
Sbjct: 128 LPVLRQAAQRA-LSWLYDHYWNPAATAESEDTYDYTET 164
>SPCP1E11.03 |mug170||arrestin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 426
Score = 25.8 bits (54), Expect = 3.7
Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 4/26 (15%)
Frame = +2
Query: 233 TLCRLQERHRR----PPRLLENHLFH 298
T+C HRR RLLE H+FH
Sbjct: 290 TICYTHNHHRRIHNIKARLLETHIFH 315
>SPBC530.13 |||cyclin Ctk2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 325
Score = 25.4 bits (53), Expect = 4.8
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -1
Query: 183 PRSSWLPPSRHSAQPARLTWLYTHYLP 103
PRS + PP+ A A + LY HY P
Sbjct: 208 PRSFFAPPALTEAVIADILDLYMHYQP 234
>SPACUNK4.14 |mdb1||BRCT domain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 520
Score = 25.4 bits (53), Expect = 4.8
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -3
Query: 451 DSPVCELGMRCLSSTLRMSEQMSRSSFSTW 362
DSP +G R +S R + RSS S+W
Sbjct: 481 DSPTKVIGKRNVSKASRTGQGRKRSSRSSW 510
>SPAC1687.10 |mcp1||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 661
Score = 25.4 bits (53), Expect = 4.8
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Frame = +3
Query: 114 VYKAKLAEQAE----RYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARR 272
+YK KL E R DE+V MKN+ +N + +EL + ++N + + R
Sbjct: 202 IYKEKLRFSLESRKSRVDEIVNEMKNMCGKNPT-SELPTNYSDKTLTLWENELSSMR 257
>SPAC1610.04 |mug99||meiotically upregulated gene
Mug99|Schizosaccharomyces pombe|chr 1|||Manual
Length = 526
Score = 25.4 bits (53), Expect = 4.8
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = -3
Query: 388 MSRSSFSTWLRYALIMFSLSSAPFVSSFCSMEEMILQE 275
M R TW R L + S+AP V ++++ +L E
Sbjct: 1 MLRFGIKTWKRSVLAIRRSSTAPHVQIISNLQKKLLNE 38
>SPBC16A3.17c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 599
Score = 25.0 bits (52), Expect = 6.4
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = -3
Query: 400 MSEQMSRSSFSTWLRYALIMFSLSSAPFVSSFCSM 296
++E + +S S+W+ A ++ S + P V FC++
Sbjct: 123 IAEDFNDTSSSSWIGSAYVLASNAVLPAVGVFCNI 157
>SPAC1D4.10 |||tRNA endonuclease|Schizosaccharomyces pombe|chr
1|||Manual
Length = 809
Score = 25.0 bits (52), Expect = 6.4
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = +3
Query: 105 EDNVYKAKLAEQAERYDEMVEAMKNVASRNV 197
ED++++ + +Q Y E +E K ++NV
Sbjct: 713 EDSMHEIAIKKQHSTYSEALEVAKKAGTKNV 743
>SPAC56F8.15 |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
Length = 176
Score = 24.6 bits (51), Expect = 8.4
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -2
Query: 185 SHVLHGFHHLVIA 147
SH LH FHH IA
Sbjct: 57 SHTLHFFHHFTIA 69
>SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3699
Score = 24.6 bits (51), Expect = 8.4
Identities = 18/79 (22%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +3
Query: 201 DNELTVEERNLLSVAYKNVIGAR-RASWRIISSIEQKEETKGAEDKLNMIRAYRSQVEKE 377
DN+L +E +LLS Y++ I A + R+ + +K + +++ + + S + +
Sbjct: 2305 DNKLYIEACDLLSTIYRDPIFAHTELTARLKQAFLLATASKDTKIRMDFMDIFDSSMSRN 2364
Query: 378 LRDICSDILSVLDKHLIPS 434
+ + IL IPS
Sbjct: 2365 VYSRLTFILDATSWDTIPS 2383
>SPBC1861.04c |||RNA-binding protein Prp24|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1014
Score = 24.6 bits (51), Expect = 8.4
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = -3
Query: 448 SPVCELGMRCLSSTLRMSEQMSRSSFSTWLRYALIMFSLSSAP 320
S VCE RCL+S L ++ FS +L+ L + S P
Sbjct: 359 SAVCEEKDRCLNSNLLVNFDEVIDFFSGFLKACLYLSSNEDKP 401
>SPCC1672.07 |||U3 snoRNP-associated protein Utp21
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 902
Score = 24.6 bits (51), Expect = 8.4
Identities = 15/75 (20%), Positives = 33/75 (44%)
Frame = +3
Query: 78 HLSSTMSEREDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNV 257
H+S+ +D V + + E+ +VEA NV S + +++ + L + +
Sbjct: 649 HVSTKALRLDDVVEVSAPSVSGEKGISVVEAALNVESNAEDEEDISYRTMDQLDPNLQTL 708
Query: 258 IGARRASWRIISSIE 302
R W+ + ++E
Sbjct: 709 SKLPRTQWQTLINLE 723
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,003,284
Number of Sequences: 5004
Number of extensions: 37344
Number of successful extensions: 170
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 168
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 198176188
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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