Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_M19
(274 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC011750-1|AAH11750.1| 351|Homo sapiens eukaryotic translation ... 44 9e-05
AF035280-1|AAB88176.1| 351|Homo sapiens protein ( Homo sapiens ... 44 9e-05
AC006530-5|AAD30183.1| 351|Homo sapiens EIF-2B protein. 44 9e-05
BC003165-1|AAH03165.1| 351|Homo sapiens eukaryotic translation ... 44 1e-04
BC000494-1|AAH00494.1| 351|Homo sapiens eukaryotic translation ... 44 1e-04
L40395-1|AAC42002.1| 346|Homo sapiens protein ( Homo sapiens (c... 39 0.003
X52075-1|CAA36294.1| 400|Homo sapiens sialophorin protein. 31 0.50
M61827-1|AAA51949.1| 400|Homo sapiens leukosialin protein. 31 0.50
J04536-1|AAB59540.1| 400|Homo sapiens SPN protein. 31 0.50
J04168-1|AAA59510.1| 400|Homo sapiens SPN protein. 31 0.50
BC012350-1|AAH12350.1| 400|Homo sapiens sialophorin (leukosiali... 31 0.50
AK130389-1|BAC85340.1| 144|Homo sapiens protein ( Homo sapiens ... 31 0.66
BC111015-1|AAI11016.1| 403|Homo sapiens SLC22A17 protein protein. 31 0.87
BC090870-1|AAH90870.1| 449|Homo sapiens SLC22A17 protein protein. 31 0.87
BC020565-1|AAH20565.1| 538|Homo sapiens solute carrier family 2... 31 0.87
AJ243653-1|CAC01119.1| 366|Homo sapiens organic cation transpor... 31 0.87
AJ243122-1|CAC17762.1| 366|Homo sapiens organic cation transpor... 31 0.87
BX928748-1|CAH74051.1| 5635|Homo sapiens protein ( Human DNA seq... 29 2.6
AL391824-1|CAI17865.1| 5635|Homo sapiens protein ( Human DNA seq... 29 2.6
AL135797-1|CAI17871.1| 5635|Homo sapiens protein ( Human DNA seq... 29 2.6
AL135796-1|CAI17854.1| 5635|Homo sapiens protein ( Human DNA seq... 29 2.6
AL133553-2|CAI17858.1| 5635|Homo sapiens protein ( Human DNA seq... 29 2.6
AL133515-1|CAI17853.1| 5635|Homo sapiens protein ( Human DNA seq... 29 2.6
AL121996-1|CAI17844.1| 5635|Homo sapiens protein ( Human DNA seq... 29 2.6
AL118512-1|CAI17864.1| 5635|Homo sapiens protein ( Human DNA seq... 29 2.6
AK027344-1|BAB55049.1| 741|Homo sapiens protein ( Homo sapiens ... 29 2.6
AJ306906-1|CAC37630.1| 2673|Homo sapiens fibulin-6 protein. 29 2.6
AF156100-1|AAK68690.1| 5636|Homo sapiens hemicentin protein. 29 2.6
AK128822-1|BAC87623.1| 555|Homo sapiens protein ( Homo sapiens ... 28 4.6
AF448439-1|AAN76730.1| 704|Homo sapiens chloride channel form B... 28 4.6
AF448438-1|AAN76729.1| 686|Homo sapiens chloride channel form A... 28 4.6
X82850-1|CAA58053.1| 371|Homo sapiens thyroid transcription fac... 28 6.1
U43203-1|AAA89066.1| 401|Homo sapiens thyroid transcription fac... 28 6.1
U33749-1|AAB52381.1| 371|Homo sapiens thyroid transcription fac... 28 6.1
U19816-1|AAC50125.1| 371|Homo sapiens thyroid transcription fac... 28 6.1
U19756-1|AAA86099.1| 371|Homo sapiens thyroid transcription fac... 28 6.1
D50740-1|BAA23529.1| 371|Homo sapiens thyroid transcriptional f... 28 6.1
D50739-1|BAA23527.1| 358|Homo sapiens thyroid transcription fac... 28 6.1
BT009773-1|AAP88775.1| 401|Homo sapiens thyroid transcription f... 28 6.1
BC060773-1|AAH60773.1| 642|Homo sapiens SOX5 protein protein. 28 6.1
BC009410-1|AAH09410.1| 546|Homo sapiens chromatin licensing and... 28 6.1
BC008860-1|AAH08860.2| 528|Homo sapiens CDT1 protein protein. 28 6.1
BC006221-1|AAH06221.2| 371|Homo sapiens TITF1 protein protein. 28 6.1
BC000137-1|AAH00137.2| 546|Homo sapiens chromatin licensing and... 28 6.1
AL162586-8|CAI39767.1| 194|Homo sapiens cyclin-dependent kinase... 28 6.1
AK074317-1|BAB85048.1| 763|Homo sapiens protein ( Homo sapiens ... 28 6.1
AK074126-1|BAB84952.1| 677|Homo sapiens FLJ00198 protein protein. 28 6.1
AF321125-1|AAG45181.1| 546|Homo sapiens DNA replication factor ... 28 6.1
AB081589-1|BAC16234.1| 763|Homo sapiens L-SOX5 transcript A pro... 28 6.1
AB081588-1|BAC16233.1| 750|Homo sapiens L-SOX5 transcript B pro... 28 6.1
AB053172-1|BAB61878.1| 546|Homo sapiens Cdt1 protein. 28 6.1
BX248507-1|CAI18567.1| 940|Homo sapiens protein phosphatase 1, ... 27 8.1
BX119957-5|CAM25909.1| 940|Homo sapiens protein phosphatase 1 r... 27 8.1
BA000025-74|BAB63324.1| 940|Homo sapiens FB19 protein. 27 8.1
AL662825-9|CAI17838.1| 940|Homo sapiens protein phosphatase 1, ... 27 8.1
AL662800-9|CAI18160.1| 940|Homo sapiens protein phosphatase 1, ... 27 8.1
AJ544537-1|CAD67521.1| 940|Homo sapiens protein phospahatase nu... 27 8.1
AB202094-1|BAE78613.1| 940|Homo sapiens protein phosphatase 1, ... 27 8.1
AB103603-1|BAF31264.1| 940|Homo sapiens FB19 protein protein. 27 8.1
AB088097-1|BAC54929.1| 940|Homo sapiens protein phosphatase 1, ... 27 8.1
>BC011750-1|AAH11750.1| 351|Homo sapiens eukaryotic translation
initiation factor 2B, subunit 2 beta, 39kDa protein.
Length = 351
Score = 44.0 bits (99), Expect = 9e-05
Identities = 27/78 (34%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = +2
Query: 8 RATMTMLEQIITDSENATAYELCXXXXXXXXXXXXXXPMELVTANIVRRVLRAVRDE-NR 184
R T+ +L QIITD + A EL P E N+VRRVL+ +R+E R
Sbjct: 36 RETLGLLRQIITDHRWSNAGELMELIRREGRRMTAAQPSETTVGNMVRRVLKIIREEYGR 95
Query: 185 AHANQSGETAGESLQGLV 238
H ESL L+
Sbjct: 96 LHGRSDESDQQESLHKLL 113
>AF035280-1|AAB88176.1| 351|Homo sapiens protein ( Homo sapiens
clone 23689 mRNA, complete cds. ).
Length = 351
Score = 44.0 bits (99), Expect = 9e-05
Identities = 27/78 (34%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = +2
Query: 8 RATMTMLEQIITDSENATAYELCXXXXXXXXXXXXXXPMELVTANIVRRVLRAVRDE-NR 184
R T+ +L QIITD + A EL P E N+VRRVL+ +R+E R
Sbjct: 36 RETLGLLRQIITDHRWSNAGELMELIRREGRRMTAAQPSETTVGNMVRRVLKIIREEYGR 95
Query: 185 AHANQSGETAGESLQGLV 238
H ESL L+
Sbjct: 96 LHGRSDESDQQESLHKLL 113
>AC006530-5|AAD30183.1| 351|Homo sapiens EIF-2B protein.
Length = 351
Score = 44.0 bits (99), Expect = 9e-05
Identities = 27/78 (34%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = +2
Query: 8 RATMTMLEQIITDSENATAYELCXXXXXXXXXXXXXXPMELVTANIVRRVLRAVRDE-NR 184
R T+ +L QIITD + A EL P E N+VRRVL+ +R+E R
Sbjct: 36 RETLGLLRQIITDHRWSNAGELMELIRREGRRMTAAQPSETTVGNMVRRVLKIIREEYGR 95
Query: 185 AHANQSGETAGESLQGLV 238
H ESL L+
Sbjct: 96 LHGRSDESDQQESLHKLL 113
>BC003165-1|AAH03165.1| 351|Homo sapiens eukaryotic translation
initiation factor 2B, subunit 2 beta, 39kDa protein.
Length = 351
Score = 43.6 bits (98), Expect = 1e-04
Identities = 27/78 (34%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = +2
Query: 8 RATMTMLEQIITDSENATAYELCXXXXXXXXXXXXXXPMELVTANIVRRVLRAVRDE-NR 184
R T+ +L QIITD + A EL P E N+VRRVL+ +R+E R
Sbjct: 36 RETLGLLRQIITDHRWSNAGELMELIRREGRRMTAAQPSETTVGNMVRRVLKIIREEYGR 95
Query: 185 AHANQSGETAGESLQGLV 238
H ESL L+
Sbjct: 96 LHGRTDESDQQESLHKLL 113
>BC000494-1|AAH00494.1| 351|Homo sapiens eukaryotic translation
initiation factor 2B, subunit 2 beta, 39kDa protein.
Length = 351
Score = 43.6 bits (98), Expect = 1e-04
Identities = 27/78 (34%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = +2
Query: 8 RATMTMLEQIITDSENATAYELCXXXXXXXXXXXXXXPMELVTANIVRRVLRAVRDE-NR 184
R T+ +L QIITD + A EL P E N+VRRVL+ +R+E R
Sbjct: 36 RETLGLLRQIITDHRWSNAGELMELIRREGRRMTAAQPSETTVGNMVRRVLKIIREEYGR 95
Query: 185 AHANQSGETAGESLQGLV 238
H ESL L+
Sbjct: 96 LHGRTDESDQQESLHKLL 113
>L40395-1|AAC42002.1| 346|Homo sapiens protein ( Homo sapiens
(clone S20iii15) mRNA, 3' end of cds. ).
Length = 346
Score = 38.7 bits (86), Expect = 0.003
Identities = 21/57 (36%), Positives = 27/57 (47%)
Frame = +2
Query: 8 RATMTMLEQIITDSENATAYELCXXXXXXXXXXXXXXPMELVTANIVRRVLRAVRDE 178
R T+ +L QIITD A EL P E N+VRRVL+ +R+E
Sbjct: 30 RETLGLLRQIITDHRWRNAGELMELIRREGRRMTAAQPSETTVGNMVRRVLKIIREE 86
>X52075-1|CAA36294.1| 400|Homo sapiens sialophorin protein.
Length = 400
Score = 31.5 bits (68), Expect = 0.50
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +1
Query: 76 WSAPCSGPEAGARTSYGAGHRQHSAAGAPRGQG*EQSPCQSEWGDRRRELAG 231
W+ P PE GA T G +G P G+G + P + + RR+ G
Sbjct: 303 WAGPAQVPEEGAVTVTVGGSGGDKGSGFPDGEGSSRRPTLTTFFGRRKSRQG 354
>M61827-1|AAA51949.1| 400|Homo sapiens leukosialin protein.
Length = 400
Score = 31.5 bits (68), Expect = 0.50
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +1
Query: 76 WSAPCSGPEAGARTSYGAGHRQHSAAGAPRGQG*EQSPCQSEWGDRRRELAG 231
W+ P PE GA T G +G P G+G + P + + RR+ G
Sbjct: 303 WAGPAQVPEEGAVTVTVGGSGGDKGSGFPDGEGSSRRPTLTTFFGRRKSRQG 354
>J04536-1|AAB59540.1| 400|Homo sapiens SPN protein.
Length = 400
Score = 31.5 bits (68), Expect = 0.50
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +1
Query: 76 WSAPCSGPEAGARTSYGAGHRQHSAAGAPRGQG*EQSPCQSEWGDRRRELAG 231
W+ P PE GA T G +G P G+G + P + + RR+ G
Sbjct: 303 WAGPAQVPEEGAVTVTVGGSGGDKGSGFPDGEGSSRRPTLTTFFGRRKSRQG 354
>J04168-1|AAA59510.1| 400|Homo sapiens SPN protein.
Length = 400
Score = 31.5 bits (68), Expect = 0.50
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +1
Query: 76 WSAPCSGPEAGARTSYGAGHRQHSAAGAPRGQG*EQSPCQSEWGDRRRELAG 231
W+ P PE GA T G +G P G+G + P + + RR+ G
Sbjct: 303 WAGPAQVPEEGAVTVTVGGSGGDKGSGFPDGEGSSRRPTLTTFFGRRKSRQG 354
>BC012350-1|AAH12350.1| 400|Homo sapiens sialophorin (leukosialin,
CD43) protein.
Length = 400
Score = 31.5 bits (68), Expect = 0.50
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +1
Query: 76 WSAPCSGPEAGARTSYGAGHRQHSAAGAPRGQG*EQSPCQSEWGDRRRELAG 231
W+ P PE GA T G +G P G+G + P + + RR+ G
Sbjct: 303 WAGPAQVPEEGAVTVTVGGSGGDKGSGFPDGEGSSRRPTLTTFFGRRKSRQG 354
>AK130389-1|BAC85340.1| 144|Homo sapiens protein ( Homo sapiens
cDNA FLJ26879 fis, clone PRS09162. ).
Length = 144
Score = 31.1 bits (67), Expect = 0.66
Identities = 29/84 (34%), Positives = 37/84 (44%), Gaps = 8/84 (9%)
Frame = -3
Query: 242 RAPGPASSRLRSPHSDWHGLCSHP*PRGAPAALC-WXXXXXXXXXXXASGPL------HG 84
R PG A+ LR+PH D G CS + LC + +S PL HG
Sbjct: 9 RLPGAAALALRAPHPDSPGACST--VGQSLGKLCRYQGEKSQRDEPASSSPLTQVSTDHG 66
Query: 83 ALHITHRL*HSQNL-L*SAQAWSS 15
A+ RL H L L + QAWS+
Sbjct: 67 AVVCISRLSHQNYLGLVAPQAWSA 90
>BC111015-1|AAI11016.1| 403|Homo sapiens SLC22A17 protein protein.
Length = 403
Score = 30.7 bits (66), Expect = 0.87
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +2
Query: 155 VLRAVRDENRAHANQSGETAGESLQGLVLGTPLRRTT 265
VLR + + NR H GE A E+LQ L PL T+
Sbjct: 138 VLRILAERNRPHGQMLGEEAQEALQDLENTCPLPATS 174
>BC090870-1|AAH90870.1| 449|Homo sapiens SLC22A17 protein protein.
Length = 449
Score = 30.7 bits (66), Expect = 0.87
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +2
Query: 155 VLRAVRDENRAHANQSGETAGESLQGLVLGTPLRRTT 265
VLR + + NR H GE A E+LQ L PL T+
Sbjct: 184 VLRILAERNRPHGQMLGEEAQEALQDLENTCPLPATS 220
>BC020565-1|AAH20565.1| 538|Homo sapiens solute carrier family 22
(organic cation transporter), member 17 protein.
Length = 538
Score = 30.7 bits (66), Expect = 0.87
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +2
Query: 155 VLRAVRDENRAHANQSGETAGESLQGLVLGTPLRRTT 265
VLR + + NR H GE A E+LQ L PL T+
Sbjct: 255 VLRILAERNRPHGQMLGEEAQEALQDLENTCPLPATS 291
>AJ243653-1|CAC01119.1| 366|Homo sapiens organic cation transporter
protein.
Length = 366
Score = 30.7 bits (66), Expect = 0.87
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +2
Query: 155 VLRAVRDENRAHANQSGETAGESLQGLVLGTPLRRTT 265
VLR + + NR H GE A E+LQ L PL T+
Sbjct: 101 VLRILAERNRPHGQMLGEEAQEALQDLENTCPLPATS 137
>AJ243122-1|CAC17762.1| 366|Homo sapiens organic cation transporter
protein.
Length = 366
Score = 30.7 bits (66), Expect = 0.87
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +2
Query: 155 VLRAVRDENRAHANQSGETAGESLQGLVLGTPLRRTT 265
VLR + + NR H GE A E+LQ L PL T+
Sbjct: 101 VLRILAERNRPHGQMLGEEAQEALQDLENTCPLPATS 137
>BX928748-1|CAH74051.1| 5635|Homo sapiens protein ( Human DNA sequence
from clone RP11-465I11 on chromosome 1 Contains part of
the gene for hemicentin (FIBL-6). ).
Length = 5635
Score = 29.1 bits (62), Expect = 2.6
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +3
Query: 99 GGWRSHFLWSWSPPT*CGGCSARSGMRTEPMPIRVGRP 212
G W S WS + GG R + P+P++ GRP
Sbjct: 4815 GSWGSWHSWSQCSASCGGGEKTRKRLCDHPVPVKGGRP 4852
>AL391824-1|CAI17865.1| 5635|Homo sapiens protein ( Human DNA sequence
from clone GS1-268N14 on chromosome 1 Contains part of
the gene for hemicentin. ).
Length = 5635
Score = 29.1 bits (62), Expect = 2.6
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +3
Query: 99 GGWRSHFLWSWSPPT*CGGCSARSGMRTEPMPIRVGRP 212
G W S WS + GG R + P+P++ GRP
Sbjct: 4815 GSWGSWHSWSQCSASCGGGEKTRKRLCDHPVPVKGGRP 4852
>AL135797-1|CAI17871.1| 5635|Homo sapiens protein ( Human DNA sequence
from clone GS1-77J13 on chromosome 1 Contains part of
the gene for hemicentin. ).
Length = 5635
Score = 29.1 bits (62), Expect = 2.6
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +3
Query: 99 GGWRSHFLWSWSPPT*CGGCSARSGMRTEPMPIRVGRP 212
G W S WS + GG R + P+P++ GRP
Sbjct: 4815 GSWGSWHSWSQCSASCGGGEKTRKRLCDHPVPVKGGRP 4852
>AL135796-1|CAI17854.1| 5635|Homo sapiens protein ( Human DNA sequence
from clone GS1-164L12 on chromosome 1 Contains part of
the gene for hemicentin. ).
Length = 5635
Score = 29.1 bits (62), Expect = 2.6
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +3
Query: 99 GGWRSHFLWSWSPPT*CGGCSARSGMRTEPMPIRVGRP 212
G W S WS + GG R + P+P++ GRP
Sbjct: 4815 GSWGSWHSWSQCSASCGGGEKTRKRLCDHPVPVKGGRP 4852
>AL133553-2|CAI17858.1| 5635|Homo sapiens protein ( Human DNA sequence
from clone GS1-174L6 on chromosome 1 Contains the3' end
of the gene for hemicentin, the PRG4 gene for
proteoglycan 4 ).
Length = 5635
Score = 29.1 bits (62), Expect = 2.6
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +3
Query: 99 GGWRSHFLWSWSPPT*CGGCSARSGMRTEPMPIRVGRP 212
G W S WS + GG R + P+P++ GRP
Sbjct: 4815 GSWGSWHSWSQCSASCGGGEKTRKRLCDHPVPVKGGRP 4852
>AL133515-1|CAI17853.1| 5635|Homo sapiens protein ( Human DNA sequence
from clone GS1-153O3 on chromosome 1 Contains part of
the gene for hemicentin. ).
Length = 5635
Score = 29.1 bits (62), Expect = 2.6
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +3
Query: 99 GGWRSHFLWSWSPPT*CGGCSARSGMRTEPMPIRVGRP 212
G W S WS + GG R + P+P++ GRP
Sbjct: 4815 GSWGSWHSWSQCSASCGGGEKTRKRLCDHPVPVKGGRP 4852
>AL121996-1|CAI17844.1| 5635|Homo sapiens protein ( Human DNA sequence
from clone GS1-118G19 on chromosome 1q25.1-31.1 Contains
the 5' end of the gene for hemicentin. ).
Length = 5635
Score = 29.1 bits (62), Expect = 2.6
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +3
Query: 99 GGWRSHFLWSWSPPT*CGGCSARSGMRTEPMPIRVGRP 212
G W S WS + GG R + P+P++ GRP
Sbjct: 4815 GSWGSWHSWSQCSASCGGGEKTRKRLCDHPVPVKGGRP 4852
>AL118512-1|CAI17864.1| 5635|Homo sapiens protein ( Human DNA sequence
from clone GS1-248A21 on chromosome 1q31.1-31.3 Contains
part of the gene for hemicentin (FIBL-6). ).
Length = 5635
Score = 29.1 bits (62), Expect = 2.6
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +3
Query: 99 GGWRSHFLWSWSPPT*CGGCSARSGMRTEPMPIRVGRP 212
G W S WS + GG R + P+P++ GRP
Sbjct: 4815 GSWGSWHSWSQCSASCGGGEKTRKRLCDHPVPVKGGRP 4852
>AK027344-1|BAB55049.1| 741|Homo sapiens protein ( Homo sapiens
cDNA FLJ14438 fis, clone HEMBB1000317, weakly similar to
FIBULIN-1, ISOFORM D PRECURSOR. ).
Length = 741
Score = 29.1 bits (62), Expect = 2.6
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +3
Query: 99 GGWRSHFLWSWSPPT*CGGCSARSGMRTEPMPIRVGRP 212
G W S WS + GG R + P+P++ GRP
Sbjct: 38 GSWGSWHSWSQCSASCGGGEKTRKRLCDHPVPVKGGRP 75
>AJ306906-1|CAC37630.1| 2673|Homo sapiens fibulin-6 protein.
Length = 2673
Score = 29.1 bits (62), Expect = 2.6
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +3
Query: 99 GGWRSHFLWSWSPPT*CGGCSARSGMRTEPMPIRVGRP 212
G W S WS + GG R + P+P++ GRP
Sbjct: 1853 GSWGSWHSWSQCSASCGGGEKTRKRLCDHPVPVKGGRP 1890
>AF156100-1|AAK68690.1| 5636|Homo sapiens hemicentin protein.
Length = 5636
Score = 29.1 bits (62), Expect = 2.6
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +3
Query: 99 GGWRSHFLWSWSPPT*CGGCSARSGMRTEPMPIRVGRP 212
G W S WS + GG R + P+P++ GRP
Sbjct: 4816 GSWGSWHSWSQCSASCGGGEKTRKRLCDHPVPVKGGRP 4853
>AK128822-1|BAC87623.1| 555|Homo sapiens protein ( Homo sapiens
cDNA FLJ46108 fis, clone TESTI2030519. ).
Length = 555
Score = 28.3 bits (60), Expect = 4.6
Identities = 20/55 (36%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Frame = +1
Query: 94 GPEAGA-RTSYGAGHRQHSAAGAPRGQG*EQSPCQSEWGDRRRELAGPGARHAAA 255
G AGA GAG A G G G E + E RE AG G +A A
Sbjct: 91 GEAAGAGEADVGAGGEDAEAGGEDAGSGAEDVGPEGEDVGAGREAAGEGGENAGA 145
>AF448439-1|AAN76730.1| 704|Homo sapiens chloride channel form B
protein.
Length = 704
Score = 28.3 bits (60), Expect = 4.6
Identities = 19/51 (37%), Positives = 25/51 (49%)
Frame = +1
Query: 85 PCSGPEAGARTSYGAGHRQHSAAGAPRGQG*EQSPCQSEWGDRRRELAGPG 237
P GPEA AR + GA + GAP G Q ++ G ++ E A PG
Sbjct: 65 PDRGPEAEARGTRGAHGETEAEEGAPEGAEVPQGGEETS-GAQQVEGASPG 114
>AF448438-1|AAN76729.1| 686|Homo sapiens chloride channel form A
protein.
Length = 686
Score = 28.3 bits (60), Expect = 4.6
Identities = 19/51 (37%), Positives = 25/51 (49%)
Frame = +1
Query: 85 PCSGPEAGARTSYGAGHRQHSAAGAPRGQG*EQSPCQSEWGDRRRELAGPG 237
P GPEA AR + GA + GAP G Q ++ G ++ E A PG
Sbjct: 65 PDRGPEAEARGTRGAHGETEAEEGAPEGAEVPQGGEETS-GAQQVEGASPG 114
>X82850-1|CAA58053.1| 371|Homo sapiens thyroid transcription factor
1 protein.
Length = 371
Score = 27.9 bits (59), Expect = 6.1
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = -1
Query: 271 SERGTAQRRAEHQALQALACGLPTLIGMGSVLIPDRAEHPPHYVG 137
S +G AQ++A+HQA A A +G G + H P G
Sbjct: 281 SLQGHAQQQAQHQAQAAQAAAAAISVGSGGAGLGAHPGHQPGSAG 325
>U43203-1|AAA89066.1| 401|Homo sapiens thyroid transcription factor
1 protein.
Length = 401
Score = 27.9 bits (59), Expect = 6.1
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = -1
Query: 271 SERGTAQRRAEHQALQALACGLPTLIGMGSVLIPDRAEHPPHYVG 137
S +G AQ++A+HQA A A +G G + H P G
Sbjct: 311 SLQGHAQQQAQHQAQAAQAAAAAISVGSGGAGLGAHPGHQPGSAG 355
>U33749-1|AAB52381.1| 371|Homo sapiens thyroid transcription
factor-1 protein.
Length = 371
Score = 27.9 bits (59), Expect = 6.1
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = -1
Query: 271 SERGTAQRRAEHQALQALACGLPTLIGMGSVLIPDRAEHPPHYVG 137
S +G AQ++A+HQA A A +G G + H P G
Sbjct: 281 SLQGHAQQQAQHQAQAAQAAAAAISVGSGGAGLGAHPGHQPGSAG 325
>U19816-1|AAC50125.1| 371|Homo sapiens thyroid transcription
factor-1 protein.
Length = 371
Score = 27.9 bits (59), Expect = 6.1
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = -1
Query: 271 SERGTAQRRAEHQALQALACGLPTLIGMGSVLIPDRAEHPPHYVG 137
S +G AQ++A+HQA A A +G G + H P G
Sbjct: 281 SLQGHAQQQAQHQAQAAQAAAAAISVGSGGAGLGAHPGHQPGSAG 325
>U19756-1|AAA86099.1| 371|Homo sapiens thyroid transcription factor
1 protein.
Length = 371
Score = 27.9 bits (59), Expect = 6.1
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = -1
Query: 271 SERGTAQRRAEHQALQALACGLPTLIGMGSVLIPDRAEHPPHYVG 137
S +G AQ++A+HQA A A +G G + H P G
Sbjct: 281 SLQGHAQQQAQHQAQAAQAAAAAISVGSGGAGLGAHPGHQPGSAG 325
>D50740-1|BAA23529.1| 371|Homo sapiens thyroid transcriptional
factor-1 protein.
Length = 371
Score = 27.9 bits (59), Expect = 6.1
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = -1
Query: 271 SERGTAQRRAEHQALQALACGLPTLIGMGSVLIPDRAEHPPHYVG 137
S +G AQ++A+HQA A A +G G + H P G
Sbjct: 281 SLQGHAQQQAQHQAQAAQAAAAAISVGSGGAGLGAHPGHQPGSAG 325
>D50739-1|BAA23527.1| 358|Homo sapiens thyroid transcription
factor-1 protein.
Length = 358
Score = 27.9 bits (59), Expect = 6.1
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = -1
Query: 271 SERGTAQRRAEHQALQALACGLPTLIGMGSVLIPDRAEHPPHYVG 137
S +G AQ++A+HQA A A +G G + H P G
Sbjct: 268 SLQGHAQQQAQHQAQAAQAAAAAISVGSGGAGLGAHPGHQPGSAG 312
>BT009773-1|AAP88775.1| 401|Homo sapiens thyroid transcription
factor 1 protein.
Length = 401
Score = 27.9 bits (59), Expect = 6.1
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = -1
Query: 271 SERGTAQRRAEHQALQALACGLPTLIGMGSVLIPDRAEHPPHYVG 137
S +G AQ++A+HQA A A +G G + H P G
Sbjct: 311 SLQGHAQQQAQHQAQAAQAAAAAISVGSGGAGLGAHPGHQPGSAG 355
>BC060773-1|AAH60773.1| 642|Homo sapiens SOX5 protein protein.
Length = 642
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +2
Query: 191 ANQSGETAGESLQGLVLGTPLRR 259
A + G +GESL LGTP RR
Sbjct: 100 AEEGGRQSGESLSSTALGTPERR 122
>BC009410-1|AAH09410.1| 546|Homo sapiens chromatin licensing and
DNA replication factor 1 protein.
Length = 546
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -3
Query: 248 ACRAPGPASSRLRSPHSDWHGLCSHP*PRGAP 153
ACR P PA LR+P S G P AP
Sbjct: 26 ACRTPSPARPALRAPASATSGSRKRARPPAAP 57
>BC008860-1|AAH08860.2| 528|Homo sapiens CDT1 protein protein.
Length = 528
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -3
Query: 248 ACRAPGPASSRLRSPHSDWHGLCSHP*PRGAP 153
ACR P PA LR+P S G P AP
Sbjct: 8 ACRTPSPARPALRAPASATSGSRKRARPPAAP 39
>BC006221-1|AAH06221.2| 371|Homo sapiens TITF1 protein protein.
Length = 371
Score = 27.9 bits (59), Expect = 6.1
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = -1
Query: 271 SERGTAQRRAEHQALQALACGLPTLIGMGSVLIPDRAEHPPHYVG 137
S +G AQ++A+HQA A A +G G + H P G
Sbjct: 281 SLQGHAQQQAQHQAQAAQAAAAAISVGSGGAGLGAHPGHQPGSAG 325
>BC000137-1|AAH00137.2| 546|Homo sapiens chromatin licensing and
DNA replication factor 1 protein.
Length = 546
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -3
Query: 248 ACRAPGPASSRLRSPHSDWHGLCSHP*PRGAP 153
ACR P PA LR+P S G P AP
Sbjct: 26 ACRTPSPARPALRAPASATSGSRKRARPPAAP 57
>AL162586-8|CAI39767.1| 194|Homo sapiens cyclin-dependent kinase 9
(CDC2-related kinase) protein.
Length = 194
Score = 27.9 bits (59), Expect = 6.1
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
Frame = +1
Query: 124 GAGHRQHSAAGAPRGQG*EQSPCQSEWGDR----RRELAGPGARHAAA 255
G G R A APRG+ + P + +W R AGPGA AAA
Sbjct: 61 GGGRRAEEAGSAPRGR---KWPWRRKWRGRGGAWSAAAAGPGAGAAAA 105
>AK074317-1|BAB85048.1| 763|Homo sapiens protein ( Homo sapiens
cDNA FLJ23737 fis, clone HEP14950, highly similar to Mus
musculus mSox5L mRNA. ).
Length = 763
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +2
Query: 191 ANQSGETAGESLQGLVLGTPLRR 259
A + G +GESL LGTP RR
Sbjct: 113 AEEGGRQSGESLSSTALGTPERR 135
>AK074126-1|BAB84952.1| 677|Homo sapiens FLJ00198 protein protein.
Length = 677
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = +1
Query: 79 SAPCSGPEAGARTSYGAGHRQHSAAG-APRGQG 174
+ P SGP+ + AG R AG APR QG
Sbjct: 608 AGPASGPQGPGTAAAAAGGRARGTAGAAPRPQG 640
>AF321125-1|AAG45181.1| 546|Homo sapiens DNA replication factor
protein.
Length = 546
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -3
Query: 248 ACRAPGPASSRLRSPHSDWHGLCSHP*PRGAP 153
ACR P PA LR+P S G P AP
Sbjct: 26 ACRTPSPARPALRAPASATSGSRKRARPPAAP 57
>AB081589-1|BAC16234.1| 763|Homo sapiens L-SOX5 transcript A
protein.
Length = 763
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +2
Query: 191 ANQSGETAGESLQGLVLGTPLRR 259
A + G +GESL LGTP RR
Sbjct: 113 AEEGGRQSGESLSSTALGTPERR 135
>AB081588-1|BAC16233.1| 750|Homo sapiens L-SOX5 transcript B
protein.
Length = 750
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +2
Query: 191 ANQSGETAGESLQGLVLGTPLRR 259
A + G +GESL LGTP RR
Sbjct: 100 AEEGGRQSGESLSSTALGTPERR 122
>AB053172-1|BAB61878.1| 546|Homo sapiens Cdt1 protein.
Length = 546
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -3
Query: 248 ACRAPGPASSRLRSPHSDWHGLCSHP*PRGAP 153
ACR P PA LR+P S G P AP
Sbjct: 26 ACRTPSPARPALRAPASATSGSRKRARPPAAP 57
>BX248507-1|CAI18567.1| 940|Homo sapiens protein phosphatase 1,
regulatory subunit 10 protein.
Length = 940
Score = 27.5 bits (58), Expect = 8.1
Identities = 21/66 (31%), Positives = 24/66 (36%), Gaps = 7/66 (10%)
Frame = +1
Query: 85 PCSGPEAGARTSYGAGHRQHSAAGAPRGQG*EQSPCQ-------SEWGDRRRELAGPGAR 243
P GP G S G+GHR H G G G P + G R E G G
Sbjct: 799 PHEGPGGGI--SGGSGHRPHEGPGGGMGAGGGHRPHEGPGGSMGGSGGHRPHEGPGHGGP 856
Query: 244 HAAAPY 261
H P+
Sbjct: 857 HGHRPH 862
>BX119957-5|CAM25909.1| 940|Homo sapiens protein phosphatase 1
regulatory subunit 10 protein.
Length = 940
Score = 27.5 bits (58), Expect = 8.1
Identities = 21/66 (31%), Positives = 24/66 (36%), Gaps = 7/66 (10%)
Frame = +1
Query: 85 PCSGPEAGARTSYGAGHRQHSAAGAPRGQG*EQSPCQ-------SEWGDRRRELAGPGAR 243
P GP G S G+GHR H G G G P + G R E G G
Sbjct: 799 PHEGPGGGI--SGGSGHRPHEGPGGGMGAGGGHRPHEGPGGSMGGSGGHRPHEGPGHGGP 856
Query: 244 HAAAPY 261
H P+
Sbjct: 857 HGHRPH 862
>BA000025-74|BAB63324.1| 940|Homo sapiens FB19 protein.
Length = 940
Score = 27.5 bits (58), Expect = 8.1
Identities = 21/66 (31%), Positives = 24/66 (36%), Gaps = 7/66 (10%)
Frame = +1
Query: 85 PCSGPEAGARTSYGAGHRQHSAAGAPRGQG*EQSPCQ-------SEWGDRRRELAGPGAR 243
P GP G S G+GHR H G G G P + G R E G G
Sbjct: 799 PHEGPGGGI--SGGSGHRPHEGPGGGMGAGGGHRPHEGPGGSMGGSGGHRPHEGPGHGGP 856
Query: 244 HAAAPY 261
H P+
Sbjct: 857 HGHRPH 862
>AL662825-9|CAI17838.1| 940|Homo sapiens protein phosphatase 1,
regulatory subunit 10 protein.
Length = 940
Score = 27.5 bits (58), Expect = 8.1
Identities = 21/66 (31%), Positives = 24/66 (36%), Gaps = 7/66 (10%)
Frame = +1
Query: 85 PCSGPEAGARTSYGAGHRQHSAAGAPRGQG*EQSPCQ-------SEWGDRRRELAGPGAR 243
P GP G S G+GHR H G G G P + G R E G G
Sbjct: 799 PHEGPGGGI--SGGSGHRPHEGPGGGMGAGGGHRPHEGPGGSMGGSGGHRPHEGPGHGGP 856
Query: 244 HAAAPY 261
H P+
Sbjct: 857 HGHRPH 862
>AL662800-9|CAI18160.1| 940|Homo sapiens protein phosphatase 1,
regulatory subunit 10 protein.
Length = 940
Score = 27.5 bits (58), Expect = 8.1
Identities = 21/66 (31%), Positives = 24/66 (36%), Gaps = 7/66 (10%)
Frame = +1
Query: 85 PCSGPEAGARTSYGAGHRQHSAAGAPRGQG*EQSPCQ-------SEWGDRRRELAGPGAR 243
P GP G S G+GHR H G G G P + G R E G G
Sbjct: 799 PHEGPGGGI--SGGSGHRPHEGPGGGMGAGGGHRPHEGPGGSMGGSGGHRPHEGPGHGGP 856
Query: 244 HAAAPY 261
H P+
Sbjct: 857 HGHRPH 862
>AJ544537-1|CAD67521.1| 940|Homo sapiens protein phospahatase
nuclear targeting subunit protein.
Length = 940
Score = 27.5 bits (58), Expect = 8.1
Identities = 21/66 (31%), Positives = 24/66 (36%), Gaps = 7/66 (10%)
Frame = +1
Query: 85 PCSGPEAGARTSYGAGHRQHSAAGAPRGQG*EQSPCQ-------SEWGDRRRELAGPGAR 243
P GP G S G+GHR H G G G P + G R E G G
Sbjct: 799 PHEGPGGGI--SGGSGHRPHEGPGGGMGAGGGHRPHEGPGGSMGGSGGHRPHEGPGHGGP 856
Query: 244 HAAAPY 261
H P+
Sbjct: 857 HGHRPH 862
>AB202094-1|BAE78613.1| 940|Homo sapiens protein phosphatase 1,
regulatory subunit 10 protein.
Length = 940
Score = 27.5 bits (58), Expect = 8.1
Identities = 21/66 (31%), Positives = 24/66 (36%), Gaps = 7/66 (10%)
Frame = +1
Query: 85 PCSGPEAGARTSYGAGHRQHSAAGAPRGQG*EQSPCQ-------SEWGDRRRELAGPGAR 243
P GP G S G+GHR H G G G P + G R E G G
Sbjct: 799 PHEGPGGGI--SGGSGHRPHEGPGGGMGAGGGHRPHEGPGGSMGGSGGHRPHEGPGHGGP 856
Query: 244 HAAAPY 261
H P+
Sbjct: 857 HGHRPH 862
>AB103603-1|BAF31264.1| 940|Homo sapiens FB19 protein protein.
Length = 940
Score = 27.5 bits (58), Expect = 8.1
Identities = 21/66 (31%), Positives = 24/66 (36%), Gaps = 7/66 (10%)
Frame = +1
Query: 85 PCSGPEAGARTSYGAGHRQHSAAGAPRGQG*EQSPCQ-------SEWGDRRRELAGPGAR 243
P GP G S G+GHR H G G G P + G R E G G
Sbjct: 799 PHEGPGGGI--SGGSGHRPHEGPGGGMGAGGGHRPHEGPGGSMGGSGGHRPHEGPGHGGP 856
Query: 244 HAAAPY 261
H P+
Sbjct: 857 HGHRPH 862
>AB088097-1|BAC54929.1| 940|Homo sapiens protein phosphatase 1,
regulatory subunit 10 protein.
Length = 940
Score = 27.5 bits (58), Expect = 8.1
Identities = 21/66 (31%), Positives = 24/66 (36%), Gaps = 7/66 (10%)
Frame = +1
Query: 85 PCSGPEAGARTSYGAGHRQHSAAGAPRGQG*EQSPCQ-------SEWGDRRRELAGPGAR 243
P GP G S G+GHR H G G G P + G R E G G
Sbjct: 799 PHEGPGGGI--SGGSGHRPHEGPGGGMGAGGGHRPHEGPGGSMGGSGGHRPHEGPGHGGP 856
Query: 244 HAAAPY 261
H P+
Sbjct: 857 HGHRPH 862
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,594,341
Number of Sequences: 237096
Number of extensions: 1083513
Number of successful extensions: 4030
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 3842
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4019
length of database: 76,859,062
effective HSP length: 68
effective length of database: 60,736,534
effective search space used: 1336203748
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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