Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_M17
         (587 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    25   0.55 
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   2.2  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    22   3.9  
DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex det...    22   5.1  
DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex det...    22   5.1  
DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex det...    22   5.1  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   6.8  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   9.0  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   9.0  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 25.0 bits (52), Expect = 0.55
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +3

Query: 357 NFIVEYCGNFTANCELKS 410
           NF  +YCGN T N E  S
Sbjct: 105 NFANKYCGNITLNIESTS 122


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 10/25 (40%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
 Frame = +2

Query: 272 PKSP-VTFFCTKYLKKNQNFIFKYM 343
           P  P +  F TK +K+N+   F YM
Sbjct: 598 PNLPKLALFATKDIKQNEEITFDYM 622


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -3

Query: 189 VEYFKIQLILGDNDT 145
           +EY  + ++LGD+DT
Sbjct: 323 MEYCLVNIVLGDSDT 337


>DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +3

Query: 318 IKILSLNICMYNNNFIVEYCGNF 386
           I  LS N    NNN+   YC N+
Sbjct: 82  ISSLSNNYNYNNNNYKKLYCNNY 104


>DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +3

Query: 318 IKILSLNICMYNNNFIVEYCGNF 386
           I  LS N    NNN+   YC N+
Sbjct: 82  ISSLSNNYNYNNNNYKKLYCNNY 104


>DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +3

Query: 318 IKILSLNICMYNNNFIVEYCGNF 386
           I  LS N    NNN+   YC N+
Sbjct: 82  ISSLSNNYNYNNNNYKKLYCNNY 104


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = +3

Query: 342 CMYNNNFIVEYCGNFTANCELKSR 413
           C Y N  +  Y  N+T  C  + R
Sbjct: 436 CRYPNASVTPYNKNYTKFCSTEKR 459


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -3

Query: 471 TNRACSELSSFVERTK 424
           T  + S LSSF +RTK
Sbjct: 69  TEESVSALSSFYDRTK 84


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -3

Query: 471 TNRACSELSSFVERTK 424
           T  + S LSSF +RTK
Sbjct: 84  TEESVSALSSFYDRTK 99


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,034
Number of Sequences: 438
Number of extensions: 2553
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17115420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)