Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_M14
(524 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z25749-1|CAA81022.1| 194|Homo sapiens ribosomal protein S7 prot... 256 5e-68
M77233-1|AAB00969.1| 192|Homo sapiens ribosomal protein protein. 256 5e-68
BC071919-1|AAH71919.1| 194|Homo sapiens ribosomal protein S7 pr... 256 5e-68
BC061901-1|AAH61901.1| 194|Homo sapiens ribosomal protein S7 pr... 256 5e-68
BC002866-1|AAH02866.1| 194|Homo sapiens ribosomal protein S7 pr... 256 5e-68
AC108488-2|AAX82027.1| 194|Homo sapiens unknown protein. 256 5e-68
AB209386-1|BAD92623.1| 78|Homo sapiens ribosomal protein S7 va... 90 5e-18
BC073744-1|AAH73744.1| 648|Homo sapiens ITSN1 protein protein. 32 1.1
X13482-1|CAA31838.1| 255|Homo sapiens protein ( Human mRNA for ... 31 1.9
BC071717-1|AAH71717.1| 255|Homo sapiens small nuclear ribonucle... 31 1.9
BC022816-1|AAH22816.1| 255|Homo sapiens small nuclear ribonucle... 31 1.9
AK223070-1|BAD96790.1| 255|Homo sapiens small nuclear ribonucle... 31 1.9
AL359204-2|CAI39538.1| 3174|Homo sapiens vacuolar protein sortin... 31 2.5
AL359204-1|CAI39537.1| 3095|Homo sapiens vacuolar protein sortin... 31 2.5
AL353710-2|CAH74106.1| 3174|Homo sapiens vacuolar protein sortin... 31 2.5
AL353710-1|CAH74105.1| 3095|Homo sapiens vacuolar protein sortin... 31 2.5
AL158159-2|CAI40936.1| 3174|Homo sapiens vacuolar protein sortin... 31 2.5
AL158159-1|CAI40935.1| 3095|Homo sapiens vacuolar protein sortin... 31 2.5
AJ626859-1|CAF25186.1| 3069|Homo sapiens chorein 1D protein. 31 2.5
AJ608769-1|CAE75581.1| 3135|Homo sapiens chorein 2A protein. 31 2.5
AF337532-1|AAK61861.1| 3174|Homo sapiens chorea-acanthocytosis p... 31 2.5
AB054005-1|BAB59128.1| 3095|Homo sapiens chorein protein. 31 2.5
DQ679757-1|ABG74698.1| 1215|Homo sapiens intersectin 1 short for... 31 3.3
DQ679756-1|ABG74697.1| 1178|Homo sapiens intersectin 1 short for... 31 3.3
DQ679755-1|ABG74696.1| 1149|Homo sapiens intersectin 1 short for... 31 3.3
DQ679754-1|ABG74695.1| 1144|Homo sapiens intersectin 1 short for... 31 3.3
DQ386455-1|ABD72328.1| 1020|Homo sapiens intersectin 1 short for... 31 3.3
DQ340865-1|ABC69037.1| 1076|Homo sapiens intersectin 1 short for... 31 3.3
BX538175-1|CAD98050.1| 627|Homo sapiens hypothetical protein pr... 31 3.3
BC117560-1|AAI17561.1| 1144|Homo sapiens ITSN1 protein protein. 31 3.3
BC116186-1|AAI16187.1| 1721|Homo sapiens intersectin 1 (SH3 doma... 31 3.3
BC116185-1|AAI16186.1| 1716|Homo sapiens ITSN1 protein protein. 31 3.3
AL078621-9|CAB81646.1| 255|Homo sapiens protein ( G islands. ).). 31 3.3
AF114488-1|AAD29953.1| 1220|Homo sapiens intersectin short isofo... 31 3.3
AF114487-1|AAD29952.1| 1721|Homo sapiens intersectin long isofor... 31 3.3
AF064244-1|AAC78611.1| 1721|Homo sapiens intersectin long form p... 31 3.3
AF064243-1|AAC78610.1| 1220|Homo sapiens intersectin short form ... 31 3.3
AL121586-7|CAB89415.1| 2442|Homo sapiens centrosomal protein 250... 30 4.3
AK223110-1|BAD96830.1| 255|Homo sapiens small nuclear ribonucle... 30 4.3
AF049105-1|AAC07988.1| 2442|Homo sapiens centrosomal Nek2-associ... 30 4.3
U85962-1|AAC51331.2| 2442|Homo sapiens CREB-binding protein prot... 29 10.0
U47741-1|AAC51770.1| 2442|Homo sapiens CREB-binding protein prot... 29 10.0
CR456791-1|CAG33072.1| 612|Homo sapiens OS-9 protein. 29 10.0
BC044808-1|AAH44808.1| 440|Homo sapiens C14orf45 protein protein. 29 10.0
BC023513-1|AAH23513.2| 612|Homo sapiens amplified in osteosarco... 29 10.0
BC007254-1|AAH07254.1| 612|Homo sapiens amplified in osteosarco... 29 10.0
BC000532-1|AAH00532.1| 612|Homo sapiens amplified in osteosarco... 29 10.0
AK128780-1|BAC87609.1| 259|Homo sapiens protein ( Homo sapiens ... 29 10.0
AC004509-1|AAC08447.1| 555|Homo sapiens CBP protein. 29 10.0
AB210043-1|BAE06125.1| 2472|Homo sapiens CREBBP variant protein ... 29 10.0
>Z25749-1|CAA81022.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 256 bits (626), Expect = 5e-68
Identities = 126/172 (73%), Positives = 148/172 (86%), Gaps = 1/172 (0%)
Frame = +3
Query: 12 STKILKAGAIEPDTFETSISQALVELETNSDLKAQLRELYITKAKEIELHN-KKSIIIYV 188
S KI+K +PD FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+V
Sbjct: 5 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFV 64
Query: 189 PMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTS 368
P+P+LK+FQKIQ+RLVRELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+
Sbjct: 65 PVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTA 124
Query: 369 VYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLD*NQQTTIEHKVDTFQSV 524
V+DAILEDLVFP+EIVGKRIRVKLDGS+LIKVHLD QQ +EHKV+TF V
Sbjct: 125 VHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGV 176
>M77233-1|AAB00969.1| 192|Homo sapiens ribosomal protein protein.
Length = 192
Score = 256 bits (626), Expect = 5e-68
Identities = 126/172 (73%), Positives = 148/172 (86%), Gaps = 1/172 (0%)
Frame = +3
Query: 12 STKILKAGAIEPDTFETSISQALVELETNSDLKAQLRELYITKAKEIELHN-KKSIIIYV 188
S KI+K +PD FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+V
Sbjct: 3 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFV 62
Query: 189 PMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTS 368
P+P+LK+FQKIQ+RLVRELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+
Sbjct: 63 PVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTA 122
Query: 369 VYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLD*NQQTTIEHKVDTFQSV 524
V+DAILEDLVFP+EIVGKRIRVKLDGS+LIKVHLD QQ +EHKV+TF V
Sbjct: 123 VHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGV 174
>BC071919-1|AAH71919.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 256 bits (626), Expect = 5e-68
Identities = 126/172 (73%), Positives = 148/172 (86%), Gaps = 1/172 (0%)
Frame = +3
Query: 12 STKILKAGAIEPDTFETSISQALVELETNSDLKAQLRELYITKAKEIELHN-KKSIIIYV 188
S KI+K +PD FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+V
Sbjct: 5 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFV 64
Query: 189 PMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTS 368
P+P+LK+FQKIQ+RLVRELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+
Sbjct: 65 PVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTA 124
Query: 369 VYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLD*NQQTTIEHKVDTFQSV 524
V+DAILEDLVFP+EIVGKRIRVKLDGS+LIKVHLD QQ +EHKV+TF V
Sbjct: 125 VHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGV 176
>BC061901-1|AAH61901.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 256 bits (626), Expect = 5e-68
Identities = 126/172 (73%), Positives = 148/172 (86%), Gaps = 1/172 (0%)
Frame = +3
Query: 12 STKILKAGAIEPDTFETSISQALVELETNSDLKAQLRELYITKAKEIELHN-KKSIIIYV 188
S KI+K +PD FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+V
Sbjct: 5 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFV 64
Query: 189 PMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTS 368
P+P+LK+FQKIQ+RLVRELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+
Sbjct: 65 PVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTA 124
Query: 369 VYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLD*NQQTTIEHKVDTFQSV 524
V+DAILEDLVFP+EIVGKRIRVKLDGS+LIKVHLD QQ +EHKV+TF V
Sbjct: 125 VHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGV 176
>BC002866-1|AAH02866.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 256 bits (626), Expect = 5e-68
Identities = 126/172 (73%), Positives = 148/172 (86%), Gaps = 1/172 (0%)
Frame = +3
Query: 12 STKILKAGAIEPDTFETSISQALVELETNSDLKAQLRELYITKAKEIELHN-KKSIIIYV 188
S KI+K +PD FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+V
Sbjct: 5 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFV 64
Query: 189 PMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTS 368
P+P+LK+FQKIQ+RLVRELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+
Sbjct: 65 PVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTA 124
Query: 369 VYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLD*NQQTTIEHKVDTFQSV 524
V+DAILEDLVFP+EIVGKRIRVKLDGS+LIKVHLD QQ +EHKV+TF V
Sbjct: 125 VHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGV 176
>AC108488-2|AAX82027.1| 194|Homo sapiens unknown protein.
Length = 194
Score = 256 bits (626), Expect = 5e-68
Identities = 126/172 (73%), Positives = 148/172 (86%), Gaps = 1/172 (0%)
Frame = +3
Query: 12 STKILKAGAIEPDTFETSISQALVELETNSDLKAQLRELYITKAKEIELHN-KKSIIIYV 188
S KI+K +PD FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+V
Sbjct: 5 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFV 64
Query: 189 PMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTS 368
P+P+LK+FQKIQ+RLVRELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+
Sbjct: 65 PVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTA 124
Query: 369 VYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLD*NQQTTIEHKVDTFQSV 524
V+DAILEDLVFP+EIVGKRIRVKLDGS+LIKVHLD QQ +EHKV+TF V
Sbjct: 125 VHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGV 176
>AB209386-1|BAD92623.1| 78|Homo sapiens ribosomal protein S7
variant protein.
Length = 78
Score = 89.8 bits (213), Expect = 5e-18
Identities = 43/52 (82%), Positives = 48/52 (92%)
Frame = +3
Query: 351 SRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLD*NQQTTIEHKV 506
SRTLT+V+DAILEDLVFP+EIVGKRIRVKLDGS+LIKVHLD QQ +EHKV
Sbjct: 10 SRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKV 61
>BC073744-1|AAH73744.1| 648|Homo sapiens ITSN1 protein protein.
Length = 648
Score = 32.3 bits (70), Expect = 1.1
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +3
Query: 6 RMSTKILKAGAIEPDTFETSISQALVELETNSDLKAQLRELYITKAKEI-ELHNKKSIII 182
R S LK + + L E+E + K Q +++ + KE+ E+HNK+ +
Sbjct: 562 RDSLVTLKRALEAKELARQHLRDQLDEVEKETRSKLQEIDIFNNQLKELREIHNKQQLQK 621
Query: 183 YVPMPKLKAFQKIQIRLVRELEKK 254
M + QK Q R + ELEKK
Sbjct: 622 QKSMEAERLKQKEQERKIIELEKK 645
>X13482-1|CAA31838.1| 255|Homo sapiens protein ( Human mRNA for U2
snRNP-specific A' protein. ).
Length = 255
Score = 31.5 bits (68), Expect = 1.9
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +3
Query: 69 SQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV----PMPKLKAFQKIQIRLV 236
+ +LVEL + D A L+ L + NKK +YV P ++ FQK++++
Sbjct: 97 NNSLVELG-DLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKER 155
Query: 237 RELEKKFSGK 266
+E EK F GK
Sbjct: 156 QEAEKMFKGK 165
>BC071717-1|AAH71717.1| 255|Homo sapiens small nuclear
ribonucleoprotein polypeptide A' protein.
Length = 255
Score = 31.5 bits (68), Expect = 1.9
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +3
Query: 69 SQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV----PMPKLKAFQKIQIRLV 236
+ +LVEL + D A L+ L + NKK +YV P ++ FQK++++
Sbjct: 97 NNSLVELG-DLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKER 155
Query: 237 RELEKKFSGK 266
+E EK F GK
Sbjct: 156 QEAEKMFKGK 165
>BC022816-1|AAH22816.1| 255|Homo sapiens small nuclear
ribonucleoprotein polypeptide A' protein.
Length = 255
Score = 31.5 bits (68), Expect = 1.9
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +3
Query: 69 SQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV----PMPKLKAFQKIQIRLV 236
+ +LVEL + D A L+ L + NKK +YV P ++ FQK++++
Sbjct: 97 NNSLVELG-DLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKER 155
Query: 237 RELEKKFSGK 266
+E EK F GK
Sbjct: 156 QEAEKMFKGK 165
>AK223070-1|BAD96790.1| 255|Homo sapiens small nuclear
ribonucleoprotein polypeptide A' variant protein.
Length = 255
Score = 31.5 bits (68), Expect = 1.9
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +3
Query: 69 SQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV----PMPKLKAFQKIQIRLV 236
+ +LVEL + D A L+ L + NKK +YV P ++ FQK++++
Sbjct: 97 NNSLVELG-DLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKER 155
Query: 237 RELEKKFSGK 266
+E EK F GK
Sbjct: 156 QEAEKMFKGK 165
>AL359204-2|CAI39538.1| 3174|Homo sapiens vacuolar protein sorting 13
homolog A (S. cerevisiae) protein.
Length = 3174
Score = 31.1 bits (67), Expect = 2.5
Identities = 24/100 (24%), Positives = 46/100 (46%)
Frame = +3
Query: 105 LKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVG 284
L + + + +EL +K + + V MPK K + K+ + +R +KK G +
Sbjct: 733 LSVSTQHILVPMHFNLEL-SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI-- 789
Query: 285 DRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFP 404
+ +PKP T V+ K + +T TS+ + + + P
Sbjct: 790 --ESIPKPEPVTEVSAPVKSFQIQTSTSLGTSQISQKIIP 827
>AL359204-1|CAI39537.1| 3095|Homo sapiens vacuolar protein sorting 13
homolog A (S. cerevisiae) protein.
Length = 3095
Score = 31.1 bits (67), Expect = 2.5
Identities = 24/100 (24%), Positives = 46/100 (46%)
Frame = +3
Query: 105 LKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVG 284
L + + + +EL +K + + V MPK K + K+ + +R +KK G +
Sbjct: 733 LSVSTQHILVPMHFNLEL-SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI-- 789
Query: 285 DRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFP 404
+ +PKP T V+ K + +T TS+ + + + P
Sbjct: 790 --ESIPKPEPVTEVSAPVKSFQIQTSTSLGTSQISQKIIP 827
>AL353710-2|CAH74106.1| 3174|Homo sapiens vacuolar protein sorting 13
homolog A (S. cerevisiae) protein.
Length = 3174
Score = 31.1 bits (67), Expect = 2.5
Identities = 24/100 (24%), Positives = 46/100 (46%)
Frame = +3
Query: 105 LKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVG 284
L + + + +EL +K + + V MPK K + K+ + +R +KK G +
Sbjct: 733 LSVSTQHILVPMHFNLEL-SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI-- 789
Query: 285 DRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFP 404
+ +PKP T V+ K + +T TS+ + + + P
Sbjct: 790 --ESIPKPEPVTEVSAPVKSFQIQTSTSLGTSQISQKIIP 827
>AL353710-1|CAH74105.1| 3095|Homo sapiens vacuolar protein sorting 13
homolog A (S. cerevisiae) protein.
Length = 3095
Score = 31.1 bits (67), Expect = 2.5
Identities = 24/100 (24%), Positives = 46/100 (46%)
Frame = +3
Query: 105 LKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVG 284
L + + + +EL +K + + V MPK K + K+ + +R +KK G +
Sbjct: 733 LSVSTQHILVPMHFNLEL-SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI-- 789
Query: 285 DRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFP 404
+ +PKP T V+ K + +T TS+ + + + P
Sbjct: 790 --ESIPKPEPVTEVSAPVKSFQIQTSTSLGTSQISQKIIP 827
>AL158159-2|CAI40936.1| 3174|Homo sapiens vacuolar protein sorting 13
homolog A (S. cerevisiae) protein.
Length = 3174
Score = 31.1 bits (67), Expect = 2.5
Identities = 24/100 (24%), Positives = 46/100 (46%)
Frame = +3
Query: 105 LKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVG 284
L + + + +EL +K + + V MPK K + K+ + +R +KK G +
Sbjct: 733 LSVSTQHILVPMHFNLEL-SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI-- 789
Query: 285 DRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFP 404
+ +PKP T V+ K + +T TS+ + + + P
Sbjct: 790 --ESIPKPEPVTEVSAPVKSFQIQTSTSLGTSQISQKIIP 827
>AL158159-1|CAI40935.1| 3095|Homo sapiens vacuolar protein sorting 13
homolog A (S. cerevisiae) protein.
Length = 3095
Score = 31.1 bits (67), Expect = 2.5
Identities = 24/100 (24%), Positives = 46/100 (46%)
Frame = +3
Query: 105 LKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVG 284
L + + + +EL +K + + V MPK K + K+ + +R +KK G +
Sbjct: 733 LSVSTQHILVPMHFNLEL-SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI-- 789
Query: 285 DRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFP 404
+ +PKP T V+ K + +T TS+ + + + P
Sbjct: 790 --ESIPKPEPVTEVSAPVKSFQIQTSTSLGTSQISQKIIP 827
>AJ626859-1|CAF25186.1| 3069|Homo sapiens chorein 1D protein.
Length = 3069
Score = 31.1 bits (67), Expect = 2.5
Identities = 24/100 (24%), Positives = 46/100 (46%)
Frame = +3
Query: 105 LKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVG 284
L + + + +EL +K + + V MPK K + K+ + +R +KK G +
Sbjct: 733 LSVSTQHILVPMHFNLEL-SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI-- 789
Query: 285 DRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFP 404
+ +PKP T V+ K + +T TS+ + + + P
Sbjct: 790 --ESIPKPEPVTEVSAPVKSFQIQTSTSLGTSQISQKIIP 827
>AJ608769-1|CAE75581.1| 3135|Homo sapiens chorein 2A protein.
Length = 3135
Score = 31.1 bits (67), Expect = 2.5
Identities = 24/100 (24%), Positives = 46/100 (46%)
Frame = +3
Query: 105 LKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVG 284
L + + + +EL +K + + V MPK K + K+ + +R +KK G +
Sbjct: 733 LSVSTQHILVPMHFNLEL-SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI-- 789
Query: 285 DRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFP 404
+ +PKP T V+ K + +T TS+ + + + P
Sbjct: 790 --ESIPKPEPVTEVSAPVKSFQIQTSTSLGTSQISQKIIP 827
>AF337532-1|AAK61861.1| 3174|Homo sapiens chorea-acanthocytosis
protein.
Length = 3174
Score = 31.1 bits (67), Expect = 2.5
Identities = 24/100 (24%), Positives = 46/100 (46%)
Frame = +3
Query: 105 LKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVG 284
L + + + +EL +K + + V MPK K + K+ + +R +KK G +
Sbjct: 733 LSVSTQHILVPMHFNLEL-SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI-- 789
Query: 285 DRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFP 404
+ +PKP T V+ K + +T TS+ + + + P
Sbjct: 790 --ESIPKPEPVTEVSAPVKSFQIQTSTSLGTSQISQKIIP 827
>AB054005-1|BAB59128.1| 3095|Homo sapiens chorein protein.
Length = 3095
Score = 31.1 bits (67), Expect = 2.5
Identities = 24/100 (24%), Positives = 46/100 (46%)
Frame = +3
Query: 105 LKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVG 284
L + + + +EL +K + + V MPK K + K+ + +R +KK G +
Sbjct: 733 LSVSTQHILVPMHFNLEL-SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI-- 789
Query: 285 DRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFP 404
+ +PKP T V+ K + +T TS+ + + + P
Sbjct: 790 --ESIPKPEPVTEVSAPVKSFQIQTSTSLGTSQISQKIIP 827
>DQ679757-1|ABG74698.1| 1215|Homo sapiens intersectin 1 short form
variant 5 protein.
Length = 1215
Score = 30.7 bits (66), Expect = 3.3
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +3
Query: 6 RMSTKILKAGAIEPDTFETSISQALVELETNSDLKAQLRELYITKAKEI-ELHNKKSIII 182
R S LK + + L E+E + K Q +++ + KE+ E+HNK+ +
Sbjct: 562 RDSLVTLKRALEAKELARQHLRDQLDEVEKETRSKLQEIDIFNNQLKELREIHNKQQLQK 621
Query: 183 YVPMPKLKAFQKIQIRLVRELEKK 254
M + QK Q R + ELEK+
Sbjct: 622 QKSMEAERLKQKEQERKIIELEKQ 645
>DQ679756-1|ABG74697.1| 1178|Homo sapiens intersectin 1 short form
variant 2 protein.
Length = 1178
Score = 30.7 bits (66), Expect = 3.3
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +3
Query: 6 RMSTKILKAGAIEPDTFETSISQALVELETNSDLKAQLRELYITKAKEI-ELHNKKSIII 182
R S LK + + L E+E + K Q +++ + KE+ E+HNK+ +
Sbjct: 525 RDSLVTLKRALEAKELARQHLRDQLDEVEKETRSKLQEIDIFNNQLKELREIHNKQQLQK 584
Query: 183 YVPMPKLKAFQKIQIRLVRELEKK 254
M + QK Q R + ELEK+
Sbjct: 585 QKSMEAERLKQKEQERKIIELEKQ 608
>DQ679755-1|ABG74696.1| 1149|Homo sapiens intersectin 1 short form
variant 7 protein.
Length = 1149
Score = 30.7 bits (66), Expect = 3.3
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +3
Query: 6 RMSTKILKAGAIEPDTFETSISQALVELETNSDLKAQLRELYITKAKEI-ELHNKKSIII 182
R S LK + + L E+E + K Q +++ + KE+ E+HNK+ +
Sbjct: 562 RDSLVTLKRALEAKELARQHLRDQLDEVEKETRSKLQEIDIFNNQLKELREIHNKQQLQK 621
Query: 183 YVPMPKLKAFQKIQIRLVRELEKK 254
M + QK Q R + ELEK+
Sbjct: 622 QKSMEAERLKQKEQERKIIELEKQ 645
>DQ679754-1|ABG74695.1| 1144|Homo sapiens intersectin 1 short form
variant 6 protein.
Length = 1144
Score = 30.7 bits (66), Expect = 3.3
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +3
Query: 6 RMSTKILKAGAIEPDTFETSISQALVELETNSDLKAQLRELYITKAKEI-ELHNKKSIII 182
R S LK + + L E+E + K Q +++ + KE+ E+HNK+ +
Sbjct: 562 RDSLVTLKRALEAKELARQHLRDQLDEVEKETRSKLQEIDIFNNQLKELREIHNKQQLQK 621
Query: 183 YVPMPKLKAFQKIQIRLVRELEKK 254
M + QK Q R + ELEK+
Sbjct: 622 QKSMEAERLKQKEQERKIIELEKQ 645
>DQ386455-1|ABD72328.1| 1020|Homo sapiens intersectin 1 short form
transcript variant 8 protein.
Length = 1020
Score = 30.7 bits (66), Expect = 3.3
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +3
Query: 6 RMSTKILKAGAIEPDTFETSISQALVELETNSDLKAQLRELYITKAKEI-ELHNKKSIII 182
R S LK + + L E+E + K Q +++ + KE+ E+HNK+ +
Sbjct: 562 RDSLVTLKRALEAKELARQHLRDQLDEVEKETRSKLQEIDIFNNQLKELREIHNKQQLQK 621
Query: 183 YVPMPKLKAFQKIQIRLVRELEKK 254
M + QK Q R + ELEK+
Sbjct: 622 QKSMEAERLKQKEQERKIIELEKQ 645
>DQ340865-1|ABC69037.1| 1076|Homo sapiens intersectin 1 short form
protein.
Length = 1076
Score = 30.7 bits (66), Expect = 3.3
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +3
Query: 6 RMSTKILKAGAIEPDTFETSISQALVELETNSDLKAQLRELYITKAKEI-ELHNKKSIII 182
R S LK + + L E+E + K Q +++ + KE+ E+HNK+ +
Sbjct: 560 RDSLVTLKRALEAKELARQHLRDQLDEVEKETRSKLQEIDIFNNQLKELREIHNKQQLQK 619
Query: 183 YVPMPKLKAFQKIQIRLVRELEKK 254
M + QK Q R + ELEK+
Sbjct: 620 QKSMEAERLKQKEQERKIIELEKQ 643
>BX538175-1|CAD98050.1| 627|Homo sapiens hypothetical protein
protein.
Length = 627
Score = 30.7 bits (66), Expect = 3.3
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +3
Query: 6 RMSTKILKAGAIEPDTFETSISQALVELETNSDLKAQLRELYITKAKEI-ELHNKKSIII 182
R S LK + + L E+E + K Q +++ + KE+ E+HNK+ +
Sbjct: 417 RDSLVTLKRALEAKELARQHLRDQLDEVEKETRSKLQEIDIFNNQLKELREIHNKQQLQK 476
Query: 183 YVPMPKLKAFQKIQIRLVRELEKK 254
M + QK Q R + ELEK+
Sbjct: 477 QKSMEAERLKQKEQERKIIELEKQ 500
>BC117560-1|AAI17561.1| 1144|Homo sapiens ITSN1 protein protein.
Length = 1144
Score = 30.7 bits (66), Expect = 3.3
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +3
Query: 6 RMSTKILKAGAIEPDTFETSISQALVELETNSDLKAQLRELYITKAKEI-ELHNKKSIII 182
R S LK + + L E+E + K Q +++ + KE+ E+HNK+ +
Sbjct: 562 RDSLVTLKRALEAKELARQHLRDQLDEVEKETRSKLQEIDIFNNQLKELREIHNKQQLQK 621
Query: 183 YVPMPKLKAFQKIQIRLVRELEKK 254
M + QK Q R + ELEK+
Sbjct: 622 QKSMEAERLKQKEQERKIIELEKQ 645
>BC116186-1|AAI16187.1| 1721|Homo sapiens intersectin 1 (SH3 domain
protein) protein.
Length = 1721
Score = 30.7 bits (66), Expect = 3.3
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +3
Query: 6 RMSTKILKAGAIEPDTFETSISQALVELETNSDLKAQLRELYITKAKEI-ELHNKKSIII 182
R S LK + + L E+E + K Q +++ + KE+ E+HNK+ +
Sbjct: 562 RDSLVTLKRALEAKELARQHLRDQLDEVEKETRSKLQEIDIFNNQLKELREIHNKQQLQK 621
Query: 183 YVPMPKLKAFQKIQIRLVRELEKK 254
M + QK Q R + ELEK+
Sbjct: 622 QKSMEAERLKQKEQERKIIELEKQ 645
>BC116185-1|AAI16186.1| 1716|Homo sapiens ITSN1 protein protein.
Length = 1716
Score = 30.7 bits (66), Expect = 3.3
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +3
Query: 6 RMSTKILKAGAIEPDTFETSISQALVELETNSDLKAQLRELYITKAKEI-ELHNKKSIII 182
R S LK + + L E+E + K Q +++ + KE+ E+HNK+ +
Sbjct: 562 RDSLVTLKRALEAKELARQHLRDQLDEVEKETRSKLQEIDIFNNQLKELREIHNKQQLQK 621
Query: 183 YVPMPKLKAFQKIQIRLVRELEKK 254
M + QK Q R + ELEK+
Sbjct: 622 QKSMEAERLKQKEQERKIIELEKQ 645
>AL078621-9|CAB81646.1| 255|Homo sapiens protein ( G islands. ).).
Length = 255
Score = 30.7 bits (66), Expect = 3.3
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Frame = +3
Query: 78 LVELETNSDLKAQLREL-YITKAKEIELHNK--KSIIIY-VPMPKLKAFQKIQIRLVREL 245
LVEL + D A L+ L Y++ + + + K + +IY VP ++ FQK++++ +E
Sbjct: 100 LVELG-DLDPLASLKSLTYLSILRNLVTNKKHYRLYVIYKVPQVRVLDFQKVKLKERQEA 158
Query: 246 EKKFSGK 266
EK F GK
Sbjct: 159 EKMFKGK 165
>AF114488-1|AAD29953.1| 1220|Homo sapiens intersectin short isoform
protein.
Length = 1220
Score = 30.7 bits (66), Expect = 3.3
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +3
Query: 6 RMSTKILKAGAIEPDTFETSISQALVELETNSDLKAQLRELYITKAKEI-ELHNKKSIII 182
R S LK + + L E+E + K Q +++ + KE+ E+HNK+ +
Sbjct: 562 RDSLVTLKRALEAKELARQHLRDQLDEVEKETRSKLQEIDIFNNQLKELREIHNKQQLQK 621
Query: 183 YVPMPKLKAFQKIQIRLVRELEKK 254
M + QK Q R + ELEK+
Sbjct: 622 QKSMEAERLKQKEQERKIIELEKQ 645
>AF114487-1|AAD29952.1| 1721|Homo sapiens intersectin long isoform
protein.
Length = 1721
Score = 30.7 bits (66), Expect = 3.3
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +3
Query: 6 RMSTKILKAGAIEPDTFETSISQALVELETNSDLKAQLRELYITKAKEI-ELHNKKSIII 182
R S LK + + L E+E + K Q +++ + KE+ E+HNK+ +
Sbjct: 562 RDSLVTLKRALEAKELARQHLRDQLDEVEKETRSKLQEIDIFNNQLKELREIHNKQQLQK 621
Query: 183 YVPMPKLKAFQKIQIRLVRELEKK 254
M + QK Q R + ELEK+
Sbjct: 622 QKSMEAERLKQKEQERKIIELEKQ 645
>AF064244-1|AAC78611.1| 1721|Homo sapiens intersectin long form
protein.
Length = 1721
Score = 30.7 bits (66), Expect = 3.3
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +3
Query: 6 RMSTKILKAGAIEPDTFETSISQALVELETNSDLKAQLRELYITKAKEI-ELHNKKSIII 182
R S LK + + L E+E + K Q +++ + KE+ E+HNK+ +
Sbjct: 562 RDSLVTLKRALEAKELARQHLRDQLDEVEKETRSKLQEIDIFNNQLKELREIHNKQQLQK 621
Query: 183 YVPMPKLKAFQKIQIRLVRELEKK 254
M + QK Q R + ELEK+
Sbjct: 622 QKSMEAERLKQKEQERKIIELEKQ 645
>AF064243-1|AAC78610.1| 1220|Homo sapiens intersectin short form
protein.
Length = 1220
Score = 30.7 bits (66), Expect = 3.3
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +3
Query: 6 RMSTKILKAGAIEPDTFETSISQALVELETNSDLKAQLRELYITKAKEI-ELHNKKSIII 182
R S LK + + L E+E + K Q +++ + KE+ E+HNK+ +
Sbjct: 562 RDSLVTLKRALEAKELARQHLRDQLDEVEKETRSKLQEIDIFNNQLKELREIHNKQQLQK 621
Query: 183 YVPMPKLKAFQKIQIRLVRELEKK 254
M + QK Q R + ELEK+
Sbjct: 622 QKSMEAERLKQKEQERKIIELEKQ 645
>AL121586-7|CAB89415.1| 2442|Homo sapiens centrosomal protein 250kDa
protein.
Length = 2442
Score = 30.3 bits (65), Expect = 4.3
Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Frame = +3
Query: 33 GAIEPDTFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAF 212
G I+ + + +A +EL + DLK + +E+ + + + EL +S++ ++PM +
Sbjct: 1442 GQIQELEKQREMQKAALEL-LSLDLKKRNQEVDLQQEQIQELEKCRSVLEHLPMAVQERE 1500
Query: 213 QK--IQIRLVRELEK 251
QK +Q +RELEK
Sbjct: 1501 QKLTVQREQIRELEK 1515
>AK223110-1|BAD96830.1| 255|Homo sapiens small nuclear
ribonucleoprotein polypeptide A' variant protein.
Length = 255
Score = 30.3 bits (65), Expect = 4.3
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +3
Query: 69 SQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV----PMPKLKAFQKIQIRLV 236
+ +LVEL + D A L+ L + NKK +YV P ++ FQ+++++
Sbjct: 97 NNSLVELG-DLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQRVKLKER 155
Query: 237 RELEKKFSGK 266
+E EK F GK
Sbjct: 156 QEAEKMFKGK 165
>AF049105-1|AAC07988.1| 2442|Homo sapiens centrosomal Nek2-associated
protein 1 protein.
Length = 2442
Score = 30.3 bits (65), Expect = 4.3
Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Frame = +3
Query: 33 GAIEPDTFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAF 212
G I+ + + +A +EL + DLK + +E+ + + + EL +S++ ++PM +
Sbjct: 1442 GQIQELEKQREMQKAALEL-LSLDLKKRNQEVDLQQEQIQELEKCRSVLEHLPMAVQERE 1500
Query: 213 QK--IQIRLVRELEK 251
QK +Q +RELEK
Sbjct: 1501 QKLTVQREQIRELEK 1515
>U85962-1|AAC51331.2| 2442|Homo sapiens CREB-binding protein
protein.
Length = 2442
Score = 29.1 bits (62), Expect = 10.0
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -1
Query: 155 FNFLGLGNVQFPQLSLQVRVSLKFNKSLRDRSLEGV 48
FN + LGNVQ PQ + R + N S++ S+ V
Sbjct: 724 FNPMSLGNVQLPQAPMGPRAASPMNHSVQMNSMGSV 759
>U47741-1|AAC51770.1| 2442|Homo sapiens CREB-binding protein
protein.
Length = 2442
Score = 29.1 bits (62), Expect = 10.0
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -1
Query: 155 FNFLGLGNVQFPQLSLQVRVSLKFNKSLRDRSLEGV 48
FN + LGNVQ PQ + R + N S++ S+ V
Sbjct: 724 FNPMSLGNVQLPQAPMGPRAASPMNHSVQMNSMGSV 759
>CR456791-1|CAG33072.1| 612|Homo sapiens OS-9 protein.
Length = 612
Score = 29.1 bits (62), Expect = 10.0
Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +3
Query: 39 IEPDTFETSISQALVELETNSDLKAQLRELYITKAKE-IELHNKKSIIIYVPMPKLKAFQ 215
++PD + + L S L ++ L ++ E ++ H KK ++ P P +
Sbjct: 475 LDPDGLKKESERDRAMLALTSTLNKLIKRLEEKQSPELVKKHKKKRVVPKKPPPSPQPTG 534
Query: 216 KIQIRLVR 239
KI+I++VR
Sbjct: 535 KIEIKIVR 542
>BC044808-1|AAH44808.1| 440|Homo sapiens C14orf45 protein protein.
Length = 440
Score = 29.1 bits (62), Expect = 10.0
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Frame = +3
Query: 24 LKAGAIEPDTFETSISQALVEL-ETNSDLKAQLRELYITKAKEIE--LHNK-KSI-IIYV 188
LK E D + Q L E E + K +L + Y + E+E H K K I +I+
Sbjct: 85 LKKQDQEKDNMIEKLKQQLNETKEKAQEEKDKLEQKYTRQINELEGQFHQKAKEIGMIHT 144
Query: 189 PMPKLKAFQKIQIRLVRELE 248
+ ++ FQK +I++ REL+
Sbjct: 145 ELKAVRQFQKRKIQVERELD 164
>BC023513-1|AAH23513.2| 612|Homo sapiens amplified in osteosarcoma
protein.
Length = 612
Score = 29.1 bits (62), Expect = 10.0
Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +3
Query: 39 IEPDTFETSISQALVELETNSDLKAQLRELYITKAKE-IELHNKKSIIIYVPMPKLKAFQ 215
++PD + + L S L ++ L ++ E ++ H KK ++ P P +
Sbjct: 475 LDPDGLKKESERDRAMLALTSTLNKLIKRLEEKQSPELVKKHKKKRVVPKKPPPSPQPTG 534
Query: 216 KIQIRLVR 239
KI+I++VR
Sbjct: 535 KIEIKIVR 542
>BC007254-1|AAH07254.1| 612|Homo sapiens amplified in osteosarcoma
protein.
Length = 612
Score = 29.1 bits (62), Expect = 10.0
Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +3
Query: 39 IEPDTFETSISQALVELETNSDLKAQLRELYITKAKE-IELHNKKSIIIYVPMPKLKAFQ 215
++PD + + L S L ++ L ++ E ++ H KK ++ P P +
Sbjct: 475 LDPDGLKKESERDRAMLALTSTLNKLIKRLEEKQSPELVKKHKKKRVVPKKPPPSPQPTG 534
Query: 216 KIQIRLVR 239
KI+I++VR
Sbjct: 535 KIEIKIVR 542
>BC000532-1|AAH00532.1| 612|Homo sapiens amplified in osteosarcoma
protein.
Length = 612
Score = 29.1 bits (62), Expect = 10.0
Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +3
Query: 39 IEPDTFETSISQALVELETNSDLKAQLRELYITKAKE-IELHNKKSIIIYVPMPKLKAFQ 215
++PD + + L S L ++ L ++ E ++ H KK ++ P P +
Sbjct: 475 LDPDGLKKESERDRAMLALTSTLNKLIKRLEEKQSPELVKKHKKKRVVPKKPPPSPQPTG 534
Query: 216 KIQIRLVR 239
KI+I++VR
Sbjct: 535 KIEIKIVR 542
>AK128780-1|BAC87609.1| 259|Homo sapiens protein ( Homo sapiens
cDNA FLJ45445 fis, clone BRSSN2013696. ).
Length = 259
Score = 29.1 bits (62), Expect = 10.0
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = -3
Query: 420 CQQSRPGIPDLPIWRHIQKSVSWSGAFSVCWLHVSCGWAWAGSYGHQR 277
C + RPG+ L H+Q + SG S LH+ G W S QR
Sbjct: 200 CGRQRPGLLKLASQTHLQPPGAPSGPSSSSRLHLQAG-LWPDSRSQQR 246
>AC004509-1|AAC08447.1| 555|Homo sapiens CBP protein.
Length = 555
Score = 29.1 bits (62), Expect = 10.0
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -1
Query: 155 FNFLGLGNVQFPQLSLQVRVSLKFNKSLRDRSLEGV 48
FN + LGNVQ PQ + R + N S++ S+ V
Sbjct: 458 FNPMSLGNVQLPQAPMGPRAASPMNHSVQMNSMGSV 493
>AB210043-1|BAE06125.1| 2472|Homo sapiens CREBBP variant protein
protein.
Length = 2472
Score = 29.1 bits (62), Expect = 10.0
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -1
Query: 155 FNFLGLGNVQFPQLSLQVRVSLKFNKSLRDRSLEGV 48
FN + LGNVQ PQ + R + N S++ S+ V
Sbjct: 754 FNPMSLGNVQLPQAPMGPRAASPMNHSVQMNSMGSV 789
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,792,790
Number of Sequences: 237096
Number of extensions: 1730540
Number of successful extensions: 3639
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 3443
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3631
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5046825278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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