Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_M13
(432 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 276 4e-75
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 274 1e-74
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 274 1e-74
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 274 1e-74
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 274 1e-74
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 274 1e-74
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 274 1e-74
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 274 1e-74
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 264 2e-71
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 235 8e-63
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 186 8e-48
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 184 2e-47
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 184 2e-47
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 181 2e-46
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 180 4e-46
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 149 6e-37
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 122 1e-28
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 100 9e-22
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 69 1e-12
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 46 2e-05
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 46 2e-05
Z48045-2|CAA88100.2| 967|Caenorhabditis elegans Hypothetical pr... 31 0.27
AF435952-1|AAL30828.1| 967|Caenorhabditis elegans Ser/Thr prote... 31 0.27
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 31 0.27
AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical... 31 0.36
AF067616-11|AAC19194.2| 627|Caenorhabditis elegans Collagen pro... 30 0.62
U39745-4|AAA80446.1| 325|Caenorhabditis elegans Collagen protei... 29 1.4
AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical ... 29 1.4
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 29 1.9
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 28 2.5
Z70681-1|CAA94580.1| 307|Caenorhabditis elegans Hypothetical pr... 28 2.5
U70849-7|AAF99925.2| 332|Caenorhabditis elegans Collagen protei... 28 2.5
U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protei... 28 2.5
AC024214-13|AAM97984.1| 296|Caenorhabditis elegans Collagen pro... 28 2.5
AL023837-1|CAA19499.1| 718|Caenorhabditis elegans Hypothetical ... 28 3.3
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 3.3
Z82265-5|CAB05175.1| 334|Caenorhabditis elegans Hypothetical pr... 27 4.4
Z71262-8|CAA95812.1| 302|Caenorhabditis elegans Hypothetical pr... 27 5.8
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 27 5.8
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 27 5.8
U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protei... 27 5.8
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 27 5.8
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 27 5.8
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 27 5.8
M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein. 27 5.8
AC024778-1|AAF60567.1| 393|Caenorhabditis elegans Collagen prot... 27 5.8
AC006701-1|AAM97962.1| 327|Caenorhabditis elegans Hypothetical ... 27 5.8
Z78415-7|CAH60759.1| 844|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z78415-5|CAB01670.1| 925|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical p... 27 7.7
Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z71178-2|CAA94875.1| 297|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z66522-2|CAA91407.1| 408|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical pr... 27 7.7
U21318-2|AAC46668.1| 285|Caenorhabditis elegans Collagen protei... 27 7.7
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 276 bits (677), Expect = 4e-75
Identities = 125/127 (98%), Positives = 126/127 (99%)
Frame = +3
Query: 51 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 230
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 231 SKRGILTLKYPIEHGIITTWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 410
SKRGILTLKYPIEHGI+T WDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 411 TQIMFET 431
TQIMFET
Sbjct: 121 TQIMFET 127
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 274 bits (673), Expect = 1e-74
Identities = 124/127 (97%), Positives = 126/127 (99%)
Frame = +3
Query: 51 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 230
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 231 SKRGILTLKYPIEHGIITTWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 410
SKRGILTLKYPIEHGI+T WDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 411 TQIMFET 431
TQIMFET
Sbjct: 121 TQIMFET 127
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 274 bits (673), Expect = 1e-74
Identities = 124/127 (97%), Positives = 126/127 (99%)
Frame = +3
Query: 51 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 230
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 231 SKRGILTLKYPIEHGIITTWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 410
SKRGILTLKYPIEHGI+T WDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 411 TQIMFET 431
TQIMFET
Sbjct: 121 TQIMFET 127
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 274 bits (673), Expect = 1e-74
Identities = 124/127 (97%), Positives = 126/127 (99%)
Frame = +3
Query: 51 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 230
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 231 SKRGILTLKYPIEHGIITTWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 410
SKRGILTLKYPIEHGI+T WDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 411 TQIMFET 431
TQIMFET
Sbjct: 121 TQIMFET 127
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 274 bits (673), Expect = 1e-74
Identities = 124/127 (97%), Positives = 126/127 (99%)
Frame = +3
Query: 51 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 230
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 231 SKRGILTLKYPIEHGIITTWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 410
SKRGILTLKYPIEHGI+T WDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 411 TQIMFET 431
TQIMFET
Sbjct: 121 TQIMFET 127
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 274 bits (673), Expect = 1e-74
Identities = 123/127 (96%), Positives = 126/127 (99%)
Frame = +3
Query: 51 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 230
MCDDDVAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 231 SKRGILTLKYPIEHGIITTWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 410
SKRGILTLKYPIEHGI+T WDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 411 TQIMFET 431
TQIMFET
Sbjct: 121 TQIMFET 127
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 274 bits (673), Expect = 1e-74
Identities = 124/127 (97%), Positives = 126/127 (99%)
Frame = +3
Query: 51 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 230
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 231 SKRGILTLKYPIEHGIITTWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 410
SKRGILTLKYPIEHGI+T WDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 411 TQIMFET 431
TQIMFET
Sbjct: 121 TQIMFET 127
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 274 bits (673), Expect = 1e-74
Identities = 124/127 (97%), Positives = 126/127 (99%)
Frame = +3
Query: 51 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 230
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 231 SKRGILTLKYPIEHGIITTWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 410
SKRGILTLKYPIEHGI+T WDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 411 TQIMFET 431
TQIMFET
Sbjct: 121 TQIMFET 127
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 264 bits (646), Expect = 2e-71
Identities = 117/125 (93%), Positives = 124/125 (99%)
Frame = +3
Query: 57 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 236
++++AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 237 RGILTLKYPIEHGIITTWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 416
RGILTLKYPIEHGI+T WDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK+NREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQ 121
Query: 417 IMFET 431
IMFET
Sbjct: 122 IMFET 126
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 235 bits (576), Expect = 8e-63
Identities = 106/109 (97%), Positives = 108/109 (99%)
Frame = +3
Query: 105 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIIT 284
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+T
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 285 TWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 431
WDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET
Sbjct: 65 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 113
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 186 bits (452), Expect = 8e-48
Identities = 84/86 (97%), Positives = 85/86 (98%)
Frame = +3
Query: 51 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 230
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 231 SKRGILTLKYPIEHGIITTWDDMEKI 308
SKRGILTLKYPIEHGI+T WDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 184 bits (448), Expect = 2e-47
Identities = 83/86 (96%), Positives = 85/86 (98%)
Frame = +3
Query: 51 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 230
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 231 SKRGILTLKYPIEHGIITTWDDMEKI 308
SKRGILTLKYPIEHGI+T WDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 184 bits (448), Expect = 2e-47
Identities = 83/86 (96%), Positives = 85/86 (98%)
Frame = +3
Query: 51 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 230
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 231 SKRGILTLKYPIEHGIITTWDDMEKI 308
SKRGILTLKYPIEHGI+T WDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 181 bits (441), Expect = 2e-46
Identities = 81/83 (97%), Positives = 82/83 (98%)
Frame = +3
Query: 183 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITTWDDMEKIWHHTFYNELRVAPEEHPV 362
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+T WDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 363 LLTEAPLNPKANREKMTQIMFET 431
LLTEAPLNPKANREKMTQIMFET
Sbjct: 61 LLTEAPLNPKANREKMTQIMFET 83
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 180 bits (438), Expect = 4e-46
Identities = 81/83 (97%), Positives = 82/83 (98%)
Frame = +3
Query: 51 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 230
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 231 SKRGILTLKYPIEHGIITTWDDM 299
SKRGILTLKYPIEHGI+T WDDM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDM 83
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 149 bits (362), Expect = 6e-37
Identities = 67/129 (51%), Positives = 93/129 (72%), Gaps = 4/129 (3%)
Frame = +3
Query: 57 DDDVAA---LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 227
D DV A +V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A
Sbjct: 2 DYDVIANQPVVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKA 61
Query: 228 QSKRGILTLKYPIEHGIITTWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANRE 404
+S RG+ +++YP+EHGI+ W DMEKIW + F ++L++ PEEHPVLLT+APLNP NRE
Sbjct: 62 ESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRE 121
Query: 405 KMTQIMFET 431
+ +I FET
Sbjct: 122 RSAEIFFET 130
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 122 bits (294), Expect = 1e-28
Identities = 60/121 (49%), Positives = 81/121 (66%), Gaps = 3/121 (2%)
Frame = +3
Query: 75 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM-VGMGQ-KDSYVGDEAQSKRGIL 248
+VVDNG+G K G+AG + P +FPS+VGRP + VG + KD VG+E R +L
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 249 TLKYPIEHGIITTWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMF 425
+ YP+++GI+ WDDM +W HTF E L + P+E +LLTE PLNP +NREKM Q+MF
Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMF 128
Query: 426 E 428
E
Sbjct: 129 E 129
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 99.5 bits (237), Expect = 9e-22
Identities = 56/140 (40%), Positives = 73/140 (52%), Gaps = 13/140 (9%)
Frame = +3
Query: 51 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSI------VGRPRHQG------VMVGM 194
M + A V+DNG+G K G+AG+ P+ + PS V Q V G+
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGI 60
Query: 195 GQKDSYVGDEAQSKRGI-LTLKYPIEHGIITTWDDMEKIWHHTFYNELRVAPEEHPVLLT 371
D ++GDEA S T+KYPI HGI+ WD ME+ W + LR PE+H LLT
Sbjct: 61 DDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLT 120
Query: 372 EAPLNPKANREKMTQIMFET 431
E PLN NRE +IMFE+
Sbjct: 121 EPPLNTPENREYTAEIMFES 140
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 69.3 bits (162), Expect = 1e-12
Identities = 48/140 (34%), Positives = 70/140 (50%), Gaps = 17/140 (12%)
Frame = +3
Query: 60 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA--QS 233
D+V+ LV D GS + GFAG++ P+ PS + Q+ GD + Q+
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSKVQT 68
Query: 234 KR------GILTLKYP---------IEHGIITTWDDMEKIWHHTFYNELRVAPEEHPVLL 368
KR G + P ++ G+I W+ EKI H++ N L P EHPVL
Sbjct: 69 KREKNFFIGTTKIIVPRARTNMESFMKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLF 128
Query: 369 TEAPLNPKANREKMTQIMFE 428
+E+ N +A REK+T+IMFE
Sbjct: 129 SESSWNDRARREKLTEIMFE 148
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 45.6 bits (103), Expect = 2e-05
Identities = 31/121 (25%), Positives = 56/121 (46%)
Frame = +3
Query: 66 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 245
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 246 LTLKYPIEHGIITTWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 425
++ PIE G + WD ++IW TF + V + LT+ A + ++I+F
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILF 115
Query: 426 E 428
+
Sbjct: 116 D 116
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 45.6 bits (103), Expect = 2e-05
Identities = 31/121 (25%), Positives = 56/121 (46%)
Frame = +3
Query: 66 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 245
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 246 LTLKYPIEHGIITTWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 425
++ PIE G + WD ++IW TF + V + LT+ A + ++I+F
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILF 115
Query: 426 E 428
+
Sbjct: 116 D 116
>Z48045-2|CAA88100.2| 967|Caenorhabditis elegans Hypothetical
protein C41C4.4 protein.
Length = 967
Score = 31.5 bits (68), Expect = 0.27
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = -2
Query: 179 TLVARATHDGREDGARRVVTGETRFAHAGA 90
T+V R T DGRE +RVV+ +FAH A
Sbjct: 531 TVVYRGTFDGREVAVKRVVSEFVKFAHREA 560
>AF435952-1|AAL30828.1| 967|Caenorhabditis elegans Ser/Thr protein
kinase protein.
Length = 967
Score = 31.5 bits (68), Expect = 0.27
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = -2
Query: 179 TLVARATHDGREDGARRVVTGETRFAHAGA 90
T+V R T DGRE +RVV+ +FAH A
Sbjct: 531 TVVYRGTFDGREVAVKRVVSEFVKFAHREA 560
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 31.5 bits (68), Expect = 0.27
Identities = 16/45 (35%), Positives = 18/45 (40%)
Frame = +2
Query: 152 HRGSPSPPGCHGRHGTEGLLRR**GPEQERYPHPEVPHRTRYHHH 286
H G PP C GRHG GP + P R +HHH
Sbjct: 381 HGGRHGPPHCPGRHGHH-------GPPHHHHHDGRSPSRHGHHHH 418
Score = 27.9 bits (59), Expect = 3.3
Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Frame = +2
Query: 158 GSPSPPGCHGRHGTEGLLRR**GPEQERYPHPEVPHRTRYH---HH 286
G P PG HGRHG+ R G R+ P P R +H HH
Sbjct: 358 GPPHCPGRHGRHGSRSHSPRGHG-HGGRHGPPHCPGRHGHHGPPHH 402
Score = 27.5 bits (58), Expect = 4.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 152 HRGSPSPPGCHGRHGTEG 205
H G PP C GRHG G
Sbjct: 353 HGGRHGPPHCPGRHGRHG 370
>AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical
protein F59E12.1 protein.
Length = 811
Score = 31.1 bits (67), Expect = 0.36
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -3
Query: 196 PMPTMTPWWRGRPTMDGKTARGASSPAKPALHMPEPL 86
P T TP RGRP + ++ P P P+PL
Sbjct: 336 PPATQTPRSRGRPRIHSSASKKTEKPETPRAESPDPL 372
>AF067616-11|AAC19194.2| 627|Caenorhabditis elegans Collagen
protein 99 protein.
Length = 627
Score = 30.3 bits (65), Expect = 0.62
Identities = 17/36 (47%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +2
Query: 158 GSPSPPGCHGRHGTEGLLRR**GPEQER-YPHPEVP 262
G P P G G HGTEG + GPE + YP P P
Sbjct: 510 GPPGPMGLRGPHGTEGETGK-QGPEGSKGYPGPMGP 544
Score = 26.6 bits (56), Expect = 7.7
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +2
Query: 143 LPVHRGSPSPPGCHGRHGTEGL 208
LP G P PPG GR G GL
Sbjct: 176 LPGPPGPPGPPGPAGRDGRHGL 197
>U39745-4|AAA80446.1| 325|Caenorhabditis elegans Collagen protein
173 protein.
Length = 325
Score = 29.1 bits (62), Expect = 1.4
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = +2
Query: 143 LPVHRGSPSPPGCHGRHGTEGLLRR**GPEQERYPHPEVP 262
LP G P PPG G G G GP ++ P P P
Sbjct: 182 LPAPTGPPGPPGLKGMPGIPGNQGEDAGPGRQGMPGPTGP 221
>AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical
protein Y53H1A.1 protein.
Length = 613
Score = 29.1 bits (62), Expect = 1.4
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = +2
Query: 146 PVHRGSPSPPGCHGRHGTEGLLRR**GPEQERYPHPEVPHRTRYHH 283
P H G PPG H + + GP + +P P PHR H+
Sbjct: 116 PAHHGHFGPPGHHFQGPPQHFPP---GPPRPHFPGPPGPHRPPEHY 158
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 28.7 bits (61), Expect = 1.9
Identities = 19/57 (33%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Frame = +2
Query: 152 HRGSPSPPGCHGRHGT-EGLLRR**GPEQERYPHPEVPHRTRYHHHLG*HGEDLAPH 319
H +P+ G HG HGT G P + H E H +H H G HG H
Sbjct: 474 HHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGH-HGEHHHAPAHHGHHGEHGTHHGHH 529
Score = 28.7 bits (61), Expect = 1.9
Identities = 19/57 (33%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Frame = +2
Query: 152 HRGSPSPPGCHGRHGT-EGLLRR**GPEQERYPHPEVPHRTRYHHHLG*HGEDLAPH 319
H +P+ G HG HGT G P + H E H +H H G HG H
Sbjct: 532 HHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGH-HGEHHHAPAHHGHHGHHGSHGVHH 587
Score = 27.9 bits (59), Expect = 3.3
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = +2
Query: 152 HRGSPSPPGCHGRHGTEGLLRR**GPEQERYPHPEVPHRTRYHHHLG*HG 301
H +P+ G HG HG+ G+ E + H H +H H G HG
Sbjct: 567 HHHAPAHHGHHGHHGSHGVHH----GHHESHGHGH--HAPAHHGHHGEHG 610
Score = 23.4 bits (48), Expect(2) = 8.3
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +2
Query: 152 HRGSPSPPGCHGRHGT 199
H G+ P HG HGT
Sbjct: 409 HHGTHHSPAHHGEHGT 424
Score = 21.4 bits (43), Expect(2) = 8.3
Identities = 15/49 (30%), Positives = 17/49 (34%)
Frame = +2
Query: 173 PGCHGRHGTEGLLRR**GPEQERYPHPEVPHRTRYHHHLG*HGEDLAPH 319
P HG HG P + H E H +H H G HG H
Sbjct: 452 PAHHGHHGEHHH-----APAHHGH-HGEHHHAPAHHGHHGEHGTHHGHH 494
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 28.3 bits (60), Expect = 2.5
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +1
Query: 85 TMAPACAKRVSPVTTRLAPSSRP 153
T AP R P TTR AP+S+P
Sbjct: 318 TRAPPATTRAPPATTRPAPASQP 340
>Z70681-1|CAA94580.1| 307|Caenorhabditis elegans Hypothetical
protein C30F2.1 protein.
Length = 307
Score = 28.3 bits (60), Expect = 2.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2
Query: 158 GSPSPPGCHGRHGTEGL 208
G P PPGC G G GL
Sbjct: 112 GPPGPPGCRGEPGPSGL 128
>U70849-7|AAF99925.2| 332|Caenorhabditis elegans Collagen protein
111 protein.
Length = 332
Score = 28.3 bits (60), Expect = 2.5
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +2
Query: 146 PVHRGSPSPPGCHGRHGTEGLLRR**GPEQERYPHP 253
P GS PG HGR G G+ + P YP P
Sbjct: 189 PGQAGSKGAPGTHGRQGMPGVRYQLGEPGPAGYPGP 224
>U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protein
140, isoform a protein.
Length = 289
Score = 28.3 bits (60), Expect = 2.5
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 146 PVHRGSPSPPGCHGRHGTEGL 208
P + G P PPG G++GT G+
Sbjct: 246 PGNAGRPGPPGAPGKNGTPGV 266
>AC024214-13|AAM97984.1| 296|Caenorhabditis elegans Collagen
protein 106 protein.
Length = 296
Score = 28.3 bits (60), Expect = 2.5
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +2
Query: 155 RGSPSPPGCHGRHGTEG 205
RG P PPG +G++G +G
Sbjct: 218 RGPPGPPGANGKNGKQG 234
>AL023837-1|CAA19499.1| 718|Caenorhabditis elegans Hypothetical
protein Y37H2C.1 protein.
Length = 718
Score = 27.9 bits (59), Expect = 3.3
Identities = 17/75 (22%), Positives = 28/75 (37%)
Frame = +3
Query: 33 TKTHAKMCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 212
+K H D L++ +C GF G A + + G HQ + + +
Sbjct: 495 SKRHGMFVVDSSLRLIIKIVFSICSIGFTGYFAYKYFYERPSGLQSHQWICTPLSSQQKV 554
Query: 213 VGDEAQSKRGILTLK 257
+ D+ KR L K
Sbjct: 555 LEDDKNVKRRPLNSK 569
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 3.3
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 105 KAGFAGDDAPRAVFPSIVGRPRHQG 179
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>Z82265-5|CAB05175.1| 334|Caenorhabditis elegans Hypothetical
protein F02H6.7 protein.
Length = 334
Score = 27.5 bits (58), Expect = 4.4
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -2
Query: 128 VVTGETRFAHAGAIVNYERSNIVVAHFGVCFCVG 27
V T TR+AH GA V + RS ++ C C+G
Sbjct: 163 VWTEWTRWAHNGANVEWSRSRDCISGGYNCACIG 196
>Z71262-8|CAA95812.1| 302|Caenorhabditis elegans Hypothetical
protein F22D6.10 protein.
Length = 302
Score = 27.1 bits (57), Expect = 5.8
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +2
Query: 155 RGSPSPPGCHGRHGTEG 205
RG P PPG G +GT+G
Sbjct: 97 RGPPGPPGEPGENGTDG 113
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 27.1 bits (57), Expect = 5.8
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 146 PVHRGSPSPPGCHGRHGTEGL 208
P RG+P P G GR G GL
Sbjct: 501 PGQRGAPGPNGYDGRDGVNGL 521
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 27.1 bits (57), Expect = 5.8
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 146 PVHRGSPSPPGCHGRHGTEGL 208
P RG+P P G GR G GL
Sbjct: 500 PGQRGAPGPNGYDGRDGVNGL 520
>U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protein
14 protein.
Length = 345
Score = 27.1 bits (57), Expect = 5.8
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 152 HRGSPSPPGCHGRHGTEGL 208
HRG P P G GR G +G+
Sbjct: 154 HRGPPGPAGDGGRDGADGV 172
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 27.1 bits (57), Expect = 5.8
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 146 PVHRGSPSPPGCHGRHGTEGL 208
P RG+P P G GR G GL
Sbjct: 500 PGQRGAPGPNGYDGRDGVNGL 520
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 27.1 bits (57), Expect = 5.8
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 146 PVHRGSPSPPGCHGRHGTEGL 208
P RG+P P G GR G GL
Sbjct: 501 PGQRGAPGPNGYDGRDGVNGL 521
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV)
collagen protein.
Length = 1795
Score = 27.1 bits (57), Expect = 5.8
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 146 PVHRGSPSPPGCHGRHGTEGL 208
P RG+P P G GR G GL
Sbjct: 537 PGQRGAPGPNGYDGRDGVNGL 557
>M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein.
Length = 326
Score = 27.1 bits (57), Expect = 5.8
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 152 HRGSPSPPGCHGRHGTEGL 208
HRG P P G GR G +G+
Sbjct: 135 HRGPPGPAGDGGRDGADGV 153
>AC024778-1|AAF60567.1| 393|Caenorhabditis elegans Collagen protein
115 protein.
Length = 393
Score = 27.1 bits (57), Expect = 5.8
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 143 LPVHRGSPSPPGCHGRHGTEG 205
LP G P PPG HG G+ G
Sbjct: 277 LPGPPGPPGPPGLHGSPGSYG 297
>AC006701-1|AAM97962.1| 327|Caenorhabditis elegans Hypothetical
protein Y104H12D.2 protein.
Length = 327
Score = 27.1 bits (57), Expect = 5.8
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +1
Query: 43 TPKCATTMLLRS*LTMAPACAKRVSPVTTRLAPSSRP 153
TP C T++ R L P R S + +L PS+ P
Sbjct: 280 TPACLVTIMFRKLLQNHPEDMDRYSSILDQLPPSALP 316
>Z78415-7|CAH60759.1| 844|Caenorhabditis elegans Hypothetical
protein C17G1.4b protein.
Length = 844
Score = 26.6 bits (56), Expect = 7.7
Identities = 13/48 (27%), Positives = 21/48 (43%)
Frame = +2
Query: 146 PVHRGSPSPPGCHGRHGTEGLLRR**GPEQERYPHPEVPHRTRYHHHL 289
P +P PG HG G+ L +Q++ H +PH ++L
Sbjct: 365 PGQPSTPGTPGSHGTVGSNAPLSHQKPSQQQQSMHNHLPHHQYNQNNL 412
>Z78415-5|CAB01670.1| 925|Caenorhabditis elegans Hypothetical
protein C17G1.4a protein.
Length = 925
Score = 26.6 bits (56), Expect = 7.7
Identities = 13/48 (27%), Positives = 21/48 (43%)
Frame = +2
Query: 146 PVHRGSPSPPGCHGRHGTEGLLRR**GPEQERYPHPEVPHRTRYHHHL 289
P +P PG HG G+ L +Q++ H +PH ++L
Sbjct: 365 PGQPSTPGTPGSHGTVGSNAPLSHQKPSQQQQSMHNHLPHHQYNQNNL 412
>Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical
protein D2030.9b protein.
Length = 530
Score = 26.6 bits (56), Expect = 7.7
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 258 YPIEHGIITT-WDDMEKIWHHTFYNELRVAPEEHP 359
+P E+ I+++ WD + +W E +AP +HP
Sbjct: 452 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 486
>Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical
protein D2030.9a protein.
Length = 571
Score = 26.6 bits (56), Expect = 7.7
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 258 YPIEHGIITT-WDDMEKIWHHTFYNELRVAPEEHP 359
+P E+ I+++ WD + +W E +AP +HP
Sbjct: 493 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 527
>Z71178-2|CAA94875.1| 297|Caenorhabditis elegans Hypothetical
protein B0024.2 protein.
Length = 297
Score = 26.6 bits (56), Expect = 7.7
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +2
Query: 155 RGSPSPPGCHGRHGTEG 205
RG P PPG G+ GT G
Sbjct: 105 RGPPGPPGRPGQRGTSG 121
>Z66522-2|CAA91407.1| 408|Caenorhabditis elegans Hypothetical
protein F14E5.4 protein.
Length = 408
Score = 26.6 bits (56), Expect = 7.7
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = +3
Query: 255 KYPIEHGIIT--TWDDMEKIWHHTFYNELRVAPEEHPVL-LTEAPLNPKANR 401
KYP + +I TW D K + FY + + E+H ++ +T+ N K R
Sbjct: 304 KYPEYNSMIIFETWKDNGKYFVKVFYKKEEITAEDHELIDVTKFVRNCKRER 355
>Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical
protein C09G5.6 protein.
Length = 948
Score = 26.6 bits (56), Expect = 7.7
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 146 PVHRGSPSPPGCHGRHGTEGL 208
P RG P PPG G+ G GL
Sbjct: 379 PGPRGRPGPPGFPGQDGPRGL 399
>U21318-2|AAC46668.1| 285|Caenorhabditis elegans Collagen protein
75 protein.
Length = 285
Score = 26.6 bits (56), Expect = 7.7
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +2
Query: 155 RGSPSPPGCHGRHGTEGL 208
RG P PPG GR G GL
Sbjct: 243 RGEPGPPGPIGRRGGPGL 260
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,156,258
Number of Sequences: 27780
Number of extensions: 228269
Number of successful extensions: 1668
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1634
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 724655464
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -