Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_M11
         (448 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023492-1|AAY84892.1|  405|Drosophila melanogaster RE20268p pro...    71   5e-13
AE014297-355|AAF51953.1|  405|Drosophila melanogaster CG2051-PB,...    71   5e-13
AE014297-354|AAN14322.1|  405|Drosophila melanogaster CG2051-PA,...    71   5e-13
AE014297-356|AAN14323.1|  173|Drosophila melanogaster CG2051-PC,...    64   8e-11

>BT023492-1|AAY84892.1|  405|Drosophila melanogaster RE20268p
           protein.
          Length = 405

 Score = 71.3 bits (167), Expect = 5e-13
 Identities = 28/70 (40%), Positives = 45/70 (64%)
 Frame = +2

Query: 230 VVHGNEILELKLVRSTEDLEDDDTSFSPDMCHQVCGENENILGYTDLHIKLLYSACSLQT 409
           V+   E+++ KL+R   D+ +D  +F P M HQ+ GE E I GY DLH++++Y+A  L  
Sbjct: 11  VIDALEVVDFKLIRDKADINNDALTFHPAMAHQIFGETETIFGYQDLHVRVMYTAGPLHI 70

Query: 410 YLRIDYTDKI 439
           YL +DY  ++
Sbjct: 71  YLGVDYGKRV 80


>AE014297-355|AAF51953.1|  405|Drosophila melanogaster CG2051-PB,
           isoform B protein.
          Length = 405

 Score = 71.3 bits (167), Expect = 5e-13
 Identities = 28/70 (40%), Positives = 45/70 (64%)
 Frame = +2

Query: 230 VVHGNEILELKLVRSTEDLEDDDTSFSPDMCHQVCGENENILGYTDLHIKLLYSACSLQT 409
           V+   E+++ KL+R   D+ +D  +F P M HQ+ GE E I GY DLH++++Y+A  L  
Sbjct: 11  VIDALEVVDFKLIRDKADINNDALTFHPAMAHQIFGETETIFGYQDLHVRVMYTAGPLHI 70

Query: 410 YLRIDYTDKI 439
           YL +DY  ++
Sbjct: 71  YLGVDYGKRV 80


>AE014297-354|AAN14322.1|  405|Drosophila melanogaster CG2051-PA,
           isoform A protein.
          Length = 405

 Score = 71.3 bits (167), Expect = 5e-13
 Identities = 28/70 (40%), Positives = 45/70 (64%)
 Frame = +2

Query: 230 VVHGNEILELKLVRSTEDLEDDDTSFSPDMCHQVCGENENILGYTDLHIKLLYSACSLQT 409
           V+   E+++ KL+R   D+ +D  +F P M HQ+ GE E I GY DLH++++Y+A  L  
Sbjct: 11  VIDALEVVDFKLIRDKADINNDALTFHPAMAHQIFGETETIFGYQDLHVRVMYTAGPLHI 70

Query: 410 YLRIDYTDKI 439
           YL +DY  ++
Sbjct: 71  YLGVDYGKRV 80


>AE014297-356|AAN14323.1|  173|Drosophila melanogaster CG2051-PC,
           isoform C protein.
          Length = 173

 Score = 64.1 bits (149), Expect = 8e-11
 Identities = 26/59 (44%), Positives = 38/59 (64%)
 Frame = +2

Query: 263 LVRSTEDLEDDDTSFSPDMCHQVCGENENILGYTDLHIKLLYSACSLQTYLRIDYTDKI 439
           LVR   D+ +D  +F P M HQ+ GE E I GY DLH++++Y+A  L  YL +DY  ++
Sbjct: 5   LVRDKADINNDALTFHPAMAHQIFGETETIFGYQDLHVRVMYTAGPLHIYLGVDYGKRV 63


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,292,338
Number of Sequences: 53049
Number of extensions: 382800
Number of successful extensions: 813
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 793
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 813
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1435027293
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)