Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_M10
         (441 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    42   4e-06
AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    24   0.85 
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       23   2.0  
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              22   2.6  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    22   3.4  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    21   4.5  
DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.               21   4.5  
DQ069332-1|AAZ32217.1|  296|Apis mellifera RNA polymerase II lar...    21   4.5  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    21   4.5  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    21   4.5  
DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2 pr...    21   6.0  
AF441189-1|AAL73401.1|  134|Apis mellifera ribosomal protein 49 ...    21   7.9  

>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 41.5 bits (93), Expect = 4e-06
 Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 8/108 (7%)
 Frame = +2

Query: 140 CLVSSAQKAVPLLAAGIPSLGIQVLDPMFV--VQVNTSQAGLDM--DFRNTMVKGL-RNC 304
           C+  + + AV  LA G+ S  I  ++P+ V  V++  SQ  + +  +++N  + GL +N 
Sbjct: 43  CIAEAVRDAVVSLAGGLKSFKILPIEPLAVDSVKIGESQGSVTLRQEYKNIKLYGLTKNL 102

Query: 305 VVMGLKRQHLKTF---KDLKCSVTMVGEYTLCGKLLVLPIEGNGKYKI 439
            +        K     +     V  V +Y + GK+L+LP+ G GK  I
Sbjct: 103 EIKNYNIDWDKCILSSESYNPQVDFVADYKIEGKVLLLPVRGAGKSNI 150


>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 23.8 bits (49), Expect = 0.85
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -1

Query: 360 EHFRSLNVFRCCRFRPITTQFRRPLTMVFLKSMSRP 253
           E   S+++F C R +P   +FR+ +T   L+ M RP
Sbjct: 83  EREASVSLF-CPRAKPGEKKFRKVITKAPLECMCRP 117


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = +2

Query: 230 VQVNTSQAGLDMDFRNTMVKGLRNCVVMGLKRQHLK 337
           +QVN S   +     +    GLRN V+  +K+   K
Sbjct: 182 IQVNVSGDNVPQPIESFEAAGLRNIVLDNIKKSGYK 217


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +2

Query: 200 GIQVLDPMFVVQVNTSQAGLD 262
           GIQ L P+ V +  TSQ  +D
Sbjct: 25  GIQTLQPICVGETGTSQKIID 45


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +3

Query: 282 WSKVFGTVLLWV*NGNI*KRLRI 350
           WS +  T+LLW  N  I  R+ I
Sbjct: 396 WSFIVSTILLWFINKIIPIRMSI 418


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +1

Query: 100 SSLHHCMSCLRYLMFGIISAESSSFVSCWNSIP 198
           S++   M  +R  M GI+S      V  WN IP
Sbjct: 90  SAISAHMKKVREQMAGILSRIPEQGVVNWNKIP 122


>DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.
          Length = 152

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +2

Query: 236 VNTSQAGLDMDFRNTMVKGLRNCV 307
           V  +   +DMD ++++ K +R CV
Sbjct: 79  VYLNDTDMDMDLKDSIRKIIRQCV 102


>DQ069332-1|AAZ32217.1|  296|Apis mellifera RNA polymerase II large
           subunit protein.
          Length = 296

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
 Frame = +1

Query: 100 SSLHHCMSCLRYLMFGIISAESSSFVSCWNSIPGHS-GLG 216
           S LH CM  L + + G       +  + W  + GHS G+G
Sbjct: 112 SLLHICMLELGHEVCGRFYGNIQTVXNNWLLLEGHSIGIG 151


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +1

Query: 100 SSLHHCMSCLRYLMFGIISAESSSFVSCWNSIP 198
           S++   M  +R  M GI+S      V  WN IP
Sbjct: 90  SAISAHMKKVREQMAGILSRIPEQGVVNWNKIP 122


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +1

Query: 100 SSLHHCMSCLRYLMFGIISAESSSFVSCWNSIP 198
           S++   M  +R  M GI+S      V  WN IP
Sbjct: 90  SAISAHMKKVREQMAGILSRIPEQGVVNWNKIP 122


>DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2
           precursor protein.
          Length = 175

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = +1

Query: 118 MSCLRYLMFGIISAESSSFVSCWNSIP 198
           M  +R  M GI+S      V  WN IP
Sbjct: 48  MKKVREQMAGILSRIPEQGVVNWNKIP 74


>AF441189-1|AAL73401.1|  134|Apis mellifera ribosomal protein 49
           protein.
          Length = 134

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = -1

Query: 384 VYSPTIVTEHFRSLNVFRCCRFRPITTQFRRP 289
           VY PTIV +  +     +  R+  +   +R+P
Sbjct: 6   VYRPTIVKKRTKKFIRHQSDRYSKLKRNWRKP 37


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,340
Number of Sequences: 438
Number of extensions: 2809
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11450997
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)