Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_M09
(335 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1788 + 29523216-29524867,29525048-29525075 31 0.23
05_07_0357 - 29533496-29533556,29533638-29533770,29533857-295339... 31 0.23
01_06_1311 - 36181961-36182519,36182547-36182605 31 0.23
03_05_1100 - 30404224-30405018,30405100-30405435 30 0.40
10_02_0137 - 5730778-5730873,5732137-5732334,5732413-5732625,573... 30 0.53
11_06_0710 - 26492093-26493460 29 0.71
02_02_0095 + 6716327-6716335,6717302-6717451,6717523-6717583,671... 29 1.2
11_03_0072 + 9605273-9606814,9616982-9617016,9617271-9617348,961... 28 2.2
08_02_0743 - 20647440-20647927,20647997-20648426,20650127-206505... 28 2.2
01_01_1188 - 9446764-9446943,9447030-9447232,9447307-9447438,944... 28 2.2
07_03_1643 + 28329090-28329125,28329260-28329335,28329413-28330305 27 2.9
05_04_0131 + 18290201-18290650,18291474-18291626,18291950-182920... 27 2.9
05_01_0318 - 2488529-2489196,2489773-2490372,2490620-2490773,249... 27 2.9
04_03_0540 + 16929782-16929834,16929937-16930032,16930111-169301... 27 2.9
10_08_0452 - 18038182-18038253,18038338-18038415,18038502-180385... 27 3.8
06_02_0086 - 11567390-11567634,11568316-11568341,11571082-115712... 27 3.8
05_01_0129 - 872127-872681,872762-873070,873180-873347 27 3.8
04_04_1188 + 31579833-31579914,31580001-31580176,31580822-315809... 27 3.8
09_04_0434 - 17533633-17534637 27 5.0
08_02_1085 + 24237804-24238403 27 5.0
06_03_0995 + 26704029-26704107,26704543-26704595,26704907-267051... 27 5.0
05_02_0064 + 6267129-6267803 27 5.0
05_02_0048 - 6066921-6067541 27 5.0
05_01_0136 + 915140-915487,915781-916392 27 5.0
02_05_0261 + 27243898-27243938,27244068-27244157,27244293-272443... 27 5.0
09_06_0356 - 22498300-22498350,22499251-22499425,22499543-22500786 26 6.6
05_07_0359 - 29539294-29540832,29542366-29542518 26 6.6
05_05_0045 + 21830291-21830343,21830446-21830541,21830620-218306... 26 6.6
03_02_0770 + 11038971-11039392,11040071-11040353,11040697-11040798 26 6.6
03_01_0180 + 1456182-1456359,1456444-1456520,1456570-1456692,145... 26 6.6
02_05_1312 + 35642687-35642923,35643712-35643831,35644468-356445... 26 6.6
01_06_1350 + 36505926-36505978,36506081-36506176,36506255-365063... 26 6.6
01_06_0223 + 27669759-27670286 26 6.6
10_08_0544 - 18655186-18655567,18656835-18657151 26 8.7
09_03_0196 + 13374054-13374456,13375145-13375707,13375935-133759... 26 8.7
06_03_0778 - 24523780-24526353 26 8.7
05_03_0575 - 15643819-15644295 26 8.7
04_04_1466 - 33799104-33799229,33799659-33799669,33800052-338002... 26 8.7
03_02_0692 - 10438088-10438123,10438247-10438317,10438551-104386... 26 8.7
02_04_0213 + 20974712-20975413 26 8.7
02_02_0741 + 13590883-13591582,13591955-13592250 26 8.7
01_01_0832 - 6500139-6500333,6500610-6500875,6501494-6501815,650... 26 8.7
>07_03_1788 + 29523216-29524867,29525048-29525075
Length = 559
Score = 31.1 bits (67), Expect = 0.23
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +2
Query: 62 FEFNKMSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAA 193
F+ N +D + A K+GRGRP+ N PP+ A
Sbjct: 5 FDLNSAADPQTLAPPKRGRGRPRKNPPPPPPPATDPNPHPPSGA 48
Score = 27.5 bits (58), Expect = 2.9
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +2
Query: 83 DDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQA 238
DDG T+ + +GR + + +S K++K+ P A + K +D A
Sbjct: 430 DDGDTSSDYEGRKMKRLSQNRSFNKKMKQEVAPQDEASADSPAVKQADGPAA 481
>05_07_0357 -
29533496-29533556,29533638-29533770,29533857-29533953,
29534073-29534141,29534221-29534378,29534483-29534527,
29534598-29534625
Length = 196
Score = 31.1 bits (67), Expect = 0.23
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +2
Query: 104 EKKGRGRPKANG-TQSETKEVKKRGRPPAAAPKTKESAKSSDDE 232
E+K P+ANG + + E KK+G+ ++A K+K + DD+
Sbjct: 14 EEKIIPAPRANGKVEGKENEQKKQGKTDSSASKSKAAVNDDDDD 57
>01_06_1311 - 36181961-36182519,36182547-36182605
Length = 205
Score = 31.1 bits (67), Expect = 0.23
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +2
Query: 56 ALFEFNKMSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDD 229
A F DDG A + P+ +GT + E+++RG AAP+ + +S DD
Sbjct: 104 AAFSPTTSEDDGDGAGRLRPEW-PQDDGTSCDVAELRRRGDAEHAAPRRVATDRSCDD 160
>03_05_1100 - 30404224-30405018,30405100-30405435
Length = 376
Score = 30.3 bits (65), Expect = 0.40
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 137 GTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQAP 241
G + K +K+R PP++ P + S+ SS +Q P
Sbjct: 132 GKKELLKTIKRRRPPPSSPPSSSSSSSSSQHQQQP 166
>10_02_0137 -
5730778-5730873,5732137-5732334,5732413-5732625,
5732748-5732870,5733726-5733841,5734530-5734897,
5735498-5735649,5736557-5736715,5737773-5737946
Length = 532
Score = 29.9 bits (64), Expect = 0.53
Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 4/62 (6%)
Frame = +2
Query: 65 EFNKMSDDGSTAVEKKGRGRPKA----NGTQSETKEVKKRGRPPAAAPKTKESAKSSDDE 232
E + D+ S + K + +PK N T RG PPA+ K K + DD
Sbjct: 361 EDDDQEDESSPVLAPKQKDQPKDEPVDNSPAKPTPSGHARGTPPASKSKQKRKSGGGDDS 420
Query: 233 QA 238
+A
Sbjct: 421 KA 422
>11_06_0710 - 26492093-26493460
Length = 455
Score = 29.5 bits (63), Expect = 0.71
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Frame = +2
Query: 71 NKMSDDGSTAVEKKGRGRPK-ANGTQSETKEVKKRGRPP--AAAPKTKESAKSSDDE 232
+K SDD EKK + + K ++ + + K+ KK+ + P K K KSSD++
Sbjct: 146 SKSSDDDDDDAEKKSKKKSKNSDDDEDDKKKSKKKPKNPDDDEDDKKKSKKKSSDED 202
>02_02_0095 +
6716327-6716335,6717302-6717451,6717523-6717583,
6717646-6717725,6717802-6717903,6717982-6718471,
6718796-6719171,6720320-6720379,6720887-6721056,
6721287-6721340,6721384-6721523,6722362-6722511,
6722582-6722642,6722705-6722784,6722933-6723034,
6723111-6723612,6724401-6724776,6725419-6725493,
6726058-6726198,6726264-6726282
Length = 1065
Score = 28.7 bits (61), Expect = 1.2
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +2
Query: 68 FNKMSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQAP 241
F K+ D A + A + + KE KK P APK K + K ++E+AP
Sbjct: 769 FKKVMGDVKQADSVPQVQKKAAAPKEQKPKEAKKEA--PKEAPKPKAAEKPEEEEEAP 824
>11_03_0072 + 9605273-9606814,9616982-9617016,9617271-9617348,
9617427-9617501,9617583-9617657,9617731-9617977,
9618070-9618313,9618852-9619309,9619388-9619675,
9619751-9619788,9619882-9620452
Length = 1216
Score = 27.9 bits (59), Expect = 2.2
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +2
Query: 101 VEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQ 235
V K+ RGRPK N +S + + R + K+K + + E+
Sbjct: 1131 VRKRSRGRPKVNRYKSSGEAASMKRRKEVRSEKSKAANEGDSVEE 1175
>08_02_0743 -
20647440-20647927,20647997-20648426,20650127-20650570,
20650639-20650692
Length = 471
Score = 27.9 bits (59), Expect = 2.2
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +2
Query: 116 RGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQAPV 244
RGRP + K RGRPP A ++ D APV
Sbjct: 115 RGRPPKSKDPISDAIPKSRGRPPKKAKTAPAPPPAAGDGSAPV 157
>01_01_1188 -
9446764-9446943,9447030-9447232,9447307-9447438,
9447570-9447657,9447723-9447950,9449542-9449763
Length = 350
Score = 27.9 bits (59), Expect = 2.2
Identities = 13/50 (26%), Positives = 23/50 (46%)
Frame = +2
Query: 92 STAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQAP 241
S V K+ + K G + + KE++ RP K+ + K +E +P
Sbjct: 221 SPQVAKENQMASKPKGIKLKRKEIRGSARPIGGLEKSSQKRKKKKNEDSP 270
>07_03_1643 + 28329090-28329125,28329260-28329335,28329413-28330305
Length = 334
Score = 27.5 bits (58), Expect = 2.9
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +2
Query: 104 EKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDD 229
EKK + K GT+S K+ +K + A P ++AK +
Sbjct: 113 EKKAKEAAKEAGTESSEKKPEKEKKAEAKKPAKDDAAKKEGE 154
>05_04_0131 +
18290201-18290650,18291474-18291626,18291950-18292042,
18292285-18292313,18292702-18292795,18292941-18293153
Length = 343
Score = 27.5 bits (58), Expect = 2.9
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +2
Query: 92 STAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQAP 241
ST V+ P+ ++S T+E K+ +P P T + +DE P
Sbjct: 85 STEVQPADDSEPEET-SRSTTEEKKEENKPDETPPSTVTEPEEDEDEYKP 133
>05_01_0318 -
2488529-2489196,2489773-2490372,2490620-2490773,
2490996-2491085,2491926-2492061,2492159-2492418,
2493448-2493846,2494482-2494661,2494728-2494922,
2496614-2496678,2497186-2497321,2497442-2497483,
2498351-2498689
Length = 1087
Score = 27.5 bits (58), Expect = 2.9
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 50 YFALFEFNKMSDDGSTAVEKKGRGRPKANGTQSE 151
Y +++F M DGST E++GR N SE
Sbjct: 741 YLQMYQFKYMRLDGSTKTEERGRLLADFNKKDSE 774
>04_03_0540 +
16929782-16929834,16929937-16930032,16930111-16930185,
16930819-16930893,16930987-16931209,16931303-16931546,
16932111-16932568,16932647-16932928,16933032-16933733
Length = 735
Score = 27.5 bits (58), Expect = 2.9
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +2
Query: 65 EFNKMSDDGSTAVEKKGRGRPKANGTQS--ETKEVKKRGRPPAAAPKTKESAKSSDDE 232
E ++ D ++KK RGRPK N +S E +K+R T +S ++E
Sbjct: 638 EGGNLTADILPPLKKKSRGRPKVNRYKSGGEVASLKRRKEVGIEKKNTTNECESVEEE 695
>10_08_0452 -
18038182-18038253,18038338-18038415,18038502-18038579,
18039112-18039168,18039276-18039349,18039424-18039495,
18039609-18039670,18039861-18039962,18040378-18040490,
18040809-18040940,18041156-18041243,18041617-18041711,
18041793-18042023,18042567-18042680,18042765-18042866,
18043091-18043207,18043301-18044146
Length = 810
Score = 27.1 bits (57), Expect = 3.8
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Frame = +2
Query: 98 AVEKKGRGRPKANGTQSETKE----VKKRGRPPAAAPKTKESAKSSDDEQAP 241
A EK +PK G +S+TK V+K R + K K A S D + P
Sbjct: 100 AKEKPSPKKPKTLGAKSDTKSSAEGVEKEKRRSPSPTKAKALASESQDIKKP 151
>06_02_0086 -
11567390-11567634,11568316-11568341,11571082-11571224,
11571569-11571682,11571855-11572888,11574723-11575047,
11576843-11577124
Length = 722
Score = 27.1 bits (57), Expect = 3.8
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +2
Query: 56 ALFEFNKMSDDGS-TAVEKKGRGRPKANGTQSETKEVKKRG 175
AL + S GS +A KGRG+P+ GT E + +RG
Sbjct: 425 ALESSKEQSQSGSASAAVDKGRGKPQGVGTM-ENNAISERG 464
>05_01_0129 - 872127-872681,872762-873070,873180-873347
Length = 343
Score = 27.1 bits (57), Expect = 3.8
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +2
Query: 50 YFALFEFNKMSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAA 190
Y+A + K D G+ AVE A + K V++RGRPP A
Sbjct: 126 YYAPKKKKKNHDAGAVAVEDDDD--ELATVAHDKIKHVRERGRPPLA 170
>04_04_1188 +
31579833-31579914,31580001-31580176,31580822-31580923,
31581015-31581245,31581821-31581922,31582092-31582184,
31582275-31582379,31582455-31582514,31582621-31582698,
31582778-31582924,31583011-31583109,31583178-31583267,
31583360-31583451,31583529-31583646,31583783-31583871,
31583998-31584088,31584203-31584294,31584442-31584749,
31584866-31584897
Length = 728
Score = 27.1 bits (57), Expect = 3.8
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +2
Query: 98 AVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDE 232
A++KK + ++ + + PA A K +ES++SSD E
Sbjct: 210 AIQKKTQESDSSDSDSDSESDEDVPTKAPAVAKKKEESSESSDSE 254
>09_04_0434 - 17533633-17534637
Length = 334
Score = 26.6 bits (56), Expect = 5.0
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +2
Query: 83 DDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAA 193
D S V KK RGRP + + + V R PAAA
Sbjct: 74 DGASIEVAKKRRGRPPGSKNKPKPPVVITREAEPAAA 110
>08_02_1085 + 24237804-24238403
Length = 199
Score = 26.6 bits (56), Expect = 5.0
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +2
Query: 125 PKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDE 232
P A + ++ G+ PA+APK S+ S ++E
Sbjct: 89 PDAESGAESPEAGEESGKSPASAPKDSSSSSSEEEE 124
>06_03_0995 +
26704029-26704107,26704543-26704595,26704907-26705122,
26705328-26705411,26705498-26705572,26705711-26705794,
26706179-26706268,26707463-26707558,26707655-26707726,
26708500-26708604,26708804-26708845
Length = 331
Score = 26.6 bits (56), Expect = 5.0
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = -3
Query: 246 ATGACSSSDDLADSFVLGAAAGGLPLFFTSLVSDCVPFAFGL 121
ATG S A SF LG A G PLF +S + A+ +
Sbjct: 185 ATGVALVSAFAAMSFGLGWAVGSQPLFLALFISFILGTAYSI 226
>05_02_0064 + 6267129-6267803
Length = 224
Score = 26.6 bits (56), Expect = 5.0
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +2
Query: 176 RPPAAAPKTKESAKSSDDEQAP 241
RPP P+ K+ DD+Q P
Sbjct: 79 RPPPPPPRAKDGGDDDDDDQQP 100
>05_02_0048 - 6066921-6067541
Length = 206
Score = 26.6 bits (56), Expect = 5.0
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = +2
Query: 77 MSDDGSTAVEKKGRG----RPKANGTQSETKEVKKRGRPPAAAPKTKESA 214
M D+ A ++K RG RPKA S+ K K AAA +E+A
Sbjct: 1 MEDEAGAARKRKRRGEGKPRPKATKGGSKAKPKGKAAAAAAAAAAAEEAA 50
>05_01_0136 + 915140-915487,915781-916392
Length = 319
Score = 26.6 bits (56), Expect = 5.0
Identities = 11/40 (27%), Positives = 23/40 (57%)
Frame = +2
Query: 80 SDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPK 199
+D+GS+ + G+ RP+ + + S+ ++ K + R A K
Sbjct: 194 ADNGSSGTSRAGKKRPRGSKSPSKKQQPKPKNRFTDATEK 233
>02_05_0261 +
27243898-27243938,27244068-27244157,27244293-27244350,
27244441-27244485,27244778-27244855,27244940-27245041,
27245150-27245173
Length = 145
Score = 26.6 bits (56), Expect = 5.0
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +2
Query: 89 GSTAVEKKGRGRPKANGTQSETKEVKKRGRP 181
G KKG GR KA G + K+ G+P
Sbjct: 3 GKADASKKGEGRLKAAGGAGKRKKAAASGKP 33
>09_06_0356 - 22498300-22498350,22499251-22499425,22499543-22500786
Length = 489
Score = 26.2 bits (55), Expect = 6.6
Identities = 16/70 (22%), Positives = 27/70 (38%), Gaps = 2/70 (2%)
Frame = +2
Query: 35 CCERCYFALFEFNKMSDDGSTAVEKKGRGRPKANGTQS--ETKEVKKRGRPPAAAPKTKE 208
C C + S S++ G N ++ + K+V R PAAA
Sbjct: 192 CTSSCRTQPHSSSSSSSSSSSSASSSGSSSSHNNNSKEKEDEKQVVGEARRPAAAVVVAS 251
Query: 209 SAKSSDDEQA 238
+A +DD+ +
Sbjct: 252 AATQTDDDSS 261
>05_07_0359 - 29539294-29540832,29542366-29542518
Length = 563
Score = 26.2 bits (55), Expect = 6.6
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 92 STAVEKKGRGRPKANGTQSETKEVKKRGRP 181
+TA +GRGRP + S + + GRP
Sbjct: 116 ATAARGRGRGRPPKKASSSAPPQKRGPGRP 145
>05_05_0045 +
21830291-21830343,21830446-21830541,21830620-21830694,
21831329-21831403,21831497-21831719,21831813-21832056,
21832621-21832769,21832913-21832944,21832991-21833078,
21833157-21833438,21833542-21834243
Length = 672
Score = 26.2 bits (55), Expect = 6.6
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +2
Query: 65 EFNKMSDDGSTAVEKKGRGRPKANGTQS--ETKEVKKRGRPPAAAPKTKESAKSSDDE 232
E ++ D ++K+ RGRPK N +S E +K+R T +S ++E
Sbjct: 575 EGGNLTADILPPLKKRSRGRPKVNRYKSGGEVASLKRRKEVGIEKKNTTNECESVEEE 632
>03_02_0770 + 11038971-11039392,11040071-11040353,11040697-11040798
Length = 268
Score = 26.2 bits (55), Expect = 6.6
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Frame = +2
Query: 80 SDDGSTAVEKKGRGRPKANGTQSETKEVKKRG--RPPAAAP 196
+DDG AV GRGR +G E +G + PAA P
Sbjct: 54 ADDGVAAVVLAGRGRAFCSGVDLTAAEEVFKGDVKDPAADP 94
>03_01_0180 +
1456182-1456359,1456444-1456520,1456570-1456692,
1456783-1456896,1457580-1457666,1458040-1458179,
1458253-1458340,1459125-1459198,1461147-1461340,
1461430-1461632,1461955-1462001,1462084-1462336,
1462551-1462568
Length = 531
Score = 26.2 bits (55), Expect = 6.6
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = -3
Query: 213 ADSFVLGAAAGGLPLFFTSLV 151
AD FV A A LP+F SLV
Sbjct: 88 ADGFVAAACAQALPIFLDSLV 108
>02_05_1312 +
35642687-35642923,35643712-35643831,35644468-35644534,
35644673-35644694,35645053-35645152,35645282-35645414,
35645483-35645517,35645708-35646409,35646789-35647121,
35647337-35647601,35647665-35647999,35648105-35648177,
35648271-35648356,35648479-35648598,35648674-35648741,
35648825-35648882
Length = 917
Score = 26.2 bits (55), Expect = 6.6
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +2
Query: 86 DGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPK 199
DGS K+ G+ + +G + + + RPPA P+
Sbjct: 12 DGSGEEAKRKSGKQRGSGAKGRRRNGDRAFRPPAMRPE 49
>01_06_1350 +
36505926-36505978,36506081-36506176,36506255-36506329,
36506964-36507038,36507132-36507348,36507442-36507685,
36508250-36508707,36508786-36509067,36509171-36509872
Length = 733
Score = 26.2 bits (55), Expect = 6.6
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +2
Query: 65 EFNKMSDDGSTAVEKKGRGRPKANGTQS--ETKEVKKRGRPPAAAPKTKESAKSSDDE 232
E ++ D ++K+ RGRPK N +S E +K+R T +S ++E
Sbjct: 636 EGGNLTADILPPLKKRSRGRPKVNRYKSGGEVASLKRRKEVGIEKKNTTNECESVEEE 693
>01_06_0223 + 27669759-27670286
Length = 175
Score = 26.2 bits (55), Expect = 6.6
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Frame = +2
Query: 113 GRGRPKANGTQSETKEVKKRGR--PPAAAPKTKESAKSSD 226
GR RP+ + +S PPAA P E A+S D
Sbjct: 133 GRRRPRPSAARSAAAAAASASAASPPAAVPAASEGAESVD 172
>10_08_0544 - 18655186-18655567,18656835-18657151
Length = 232
Score = 25.8 bits (54), Expect = 8.7
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +2
Query: 104 EKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQAP 241
E K G+ GT +T V+ P+ +P+T E+A +++ E+AP
Sbjct: 156 EYKFMGKYVKVGTVKKTVPVEDGA--PSTSPETTETAAAAEPEKAP 199
>09_03_0196 +
13374054-13374456,13375145-13375707,13375935-13375976,
13376059-13376087,13376309-13376534,13376970-13377008,
13377126-13377155
Length = 443
Score = 25.8 bits (54), Expect = 8.7
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 110 KGRGRPKANGTQSETKEVKKRGRPPAAAPKTK 205
KG+ R + G E V KRG+ + P++K
Sbjct: 287 KGQKRERVKGKVGELAPVPKRGKAATSMPESK 318
>06_03_0778 - 24523780-24526353
Length = 857
Score = 25.8 bits (54), Expect = 8.7
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +2
Query: 47 CYFALFEFNKMSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAA 193
C ALF+ + + S G GR +N T +V+ R PPAAA
Sbjct: 414 CVAALFDGTRCTKMASLT----GAGRQGSNVTGKALIKVRTRSTPPAAA 458
>05_03_0575 - 15643819-15644295
Length = 158
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2
Query: 98 AVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESA 214
A EKK R RP + + S+ PAA+P + SA
Sbjct: 86 AYEKKRRKRPPTSFSHSQAAAAATCPASPAASPTPERSA 124
>04_04_1466 -
33799104-33799229,33799659-33799669,33800052-33800200,
33800261-33800299,33800690-33800746,33800839-33801628,
33801705-33801980,33802051-33802117,33802211-33802285,
33802618-33802812,33802927-33803076,33803152-33803522,
33804070-33804193,33804246-33804275,33804306-33804417,
33804919-33804985,33805138-33805180,33805768-33805872
Length = 928
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +2
Query: 104 EKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKS 220
EK+ R R G+ S + +R R P+A +TK+ + S
Sbjct: 750 EKEDRSRQTTKGSSSHSS---RRSRSPSARSRTKKESSS 785
>03_02_0692 -
10438088-10438123,10438247-10438317,10438551-10438620,
10439551-10439919
Length = 181
Score = 25.8 bits (54), Expect = 8.7
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +2
Query: 74 KMSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESA 214
++ DG A+ + RP A G +S + K G+P AA T +A
Sbjct: 4 RLPADGLAAI--RAALRPSARGLRSRPSQGGKAGKPSAAPLDTPRNA 48
>02_04_0213 + 20974712-20975413
Length = 233
Score = 25.8 bits (54), Expect = 8.7
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +2
Query: 173 GRPPAAAPKTKESAKSSDDEQAP 241
G PP+ +P +A DDE+ P
Sbjct: 126 GTPPSPSPSPAAAADDDDDEETP 148
>02_02_0741 + 13590883-13591582,13591955-13592250
Length = 331
Score = 25.8 bits (54), Expect = 8.7
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +2
Query: 71 NKMSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAK--SSDDE 232
++ + + + + K+ RGR G + T+ + K G P PK ES + S+DD+
Sbjct: 165 SEFTPEDAARIPKRQRGRNTFRGARQLTRHLIKYGPP---RPKDDESGERFSADDD 217
>01_01_0832 - 6500139-6500333,6500610-6500875,6501494-6501815,
6501915-6502156,6502229-6502457,6503020-6503184,
6503279-6503605,6504150-6504191,6504333-6504400,
6504748-6504934,6506249-6506311,6506748-6506790,
6506919-6507019,6507110-6507184,6507359-6507445,
6507593-6507682,6507906-6507992,6508585-6508783,
6509113-6509177,6509502-6509606,6509726-6509871,
6510100-6510224,6510335-6510437,6510482-6510596,
6510734-6510869,6511298-6511387,6511484-6511578,
6511698-6511763,6511868-6511936,6512034-6512147,
6512241-6512448,6512545-6512600,6512818-6513552
Length = 1671
Score = 25.8 bits (54), Expect = 8.7
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = -3
Query: 204 FVLGAAAGGLPLFFTSLVSDCVPFAFGLPRPF 109
+ LG A G+P+ +T ++S F+F + R +
Sbjct: 1066 YYLGGFAVGIPIVYTRIISHITRFSFFVLRDY 1097
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,003,300
Number of Sequences: 37544
Number of extensions: 107421
Number of successful extensions: 717
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 715
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 471517020
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -