Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_M09
(335 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00063-8|AAM48535.1| 1031|Caenorhabditis elegans Hypothetical pr... 33 0.051
U00063-7|AAK18965.1| 1028|Caenorhabditis elegans Hypothetical pr... 33 0.051
AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical ... 32 0.089
AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical ... 32 0.12
U64608-2|AAB04591.1| 537|Caenorhabditis elegans Hypothetical pr... 31 0.21
AL117204-13|CAB55128.1| 286|Caenorhabditis elegans Hypothetical... 30 0.36
Z73912-8|CAA98148.1| 1016|Caenorhabditis elegans Hypothetical pr... 30 0.47
Z72517-7|CAA96698.1| 1016|Caenorhabditis elegans Hypothetical pr... 30 0.47
AF125460-1|AAD12847.3| 456|Caenorhabditis elegans Hypothetical ... 30 0.47
Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical pr... 29 0.63
AL021172-1|CAA15962.1| 315|Caenorhabditis elegans Hypothetical ... 29 0.63
AF056579-1|AAC78601.1| 315|Caenorhabditis elegans high mobility... 29 0.63
Z81038-13|CAB02755.1| 971|Caenorhabditis elegans Hypothetical p... 29 0.83
Z92773-4|CAB07130.2| 584|Caenorhabditis elegans Hypothetical pr... 28 1.9
Z81114-8|CAB97236.1| 584|Caenorhabditis elegans Hypothetical pr... 28 1.9
U12964-3|AAA91222.2| 1032|Caenorhabditis elegans Nhl (ring finge... 28 1.9
AF036702-14|AAB88378.2| 396|Caenorhabditis elegans Hypothetical... 27 2.5
AF036702-13|AAB88379.2| 648|Caenorhabditis elegans Hypothetical... 27 2.5
Z98853-7|CAB57906.1| 1675|Caenorhabditis elegans Hypothetical pr... 27 3.3
Z75530-10|CAA99796.2| 1675|Caenorhabditis elegans Hypothetical p... 27 3.3
Z70213-9|CAA94177.1| 1520|Caenorhabditis elegans Hypothetical pr... 27 3.3
Z49069-5|CAA88867.1| 1520|Caenorhabditis elegans Hypothetical pr... 27 3.3
U80441-3|AAB37653.2| 262|Caenorhabditis elegans Hypothetical pr... 27 3.3
U58757-12|AAK66021.1| 60|Caenorhabditis elegans Histone h1 lik... 27 3.3
AL132860-32|CAO82074.1| 570|Caenorhabditis elegans Hypothetical... 27 3.3
AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical... 27 3.3
AF216291-1|AAF23175.1| 60|Caenorhabditis elegans histone H1.Q ... 27 3.3
Z70036-2|CAE17914.1| 155|Caenorhabditis elegans Hypothetical pr... 27 4.4
U41510-8|AAK39385.1| 493|Caenorhabditis elegans Hypothetical pr... 27 4.4
AC006712-6|AAO21405.1| 765|Caenorhabditis elegans Temporarily a... 27 4.4
AC006712-5|AAK39326.2| 851|Caenorhabditis elegans Temporarily a... 27 4.4
Z81594-7|CAJ55256.1| 4404|Caenorhabditis elegans Hypothetical pr... 26 5.8
Z80221-3|CAB02312.2| 4404|Caenorhabditis elegans Hypothetical pr... 26 5.8
Z30215-6|CAF31477.2| 1144|Caenorhabditis elegans Hypothetical pr... 26 5.8
U23448-8|AAL27226.1| 849|Caenorhabditis elegans Dnaj domain (pr... 26 5.8
U23448-7|AAM81128.1| 868|Caenorhabditis elegans Dnaj domain (pr... 26 5.8
U23448-6|AAL27225.1| 915|Caenorhabditis elegans Dnaj domain (pr... 26 5.8
U23448-5|AAL27227.1| 912|Caenorhabditis elegans Dnaj domain (pr... 26 5.8
AL032619-1|CAJ55259.1| 4404|Caenorhabditis elegans Hypothetical ... 26 5.8
AF068714-1|AAC17808.1| 254|Caenorhabditis elegans Hypothetical ... 26 5.8
AC025722-2|AAK68508.1| 605|Caenorhabditis elegans Hypothetical ... 26 5.8
Z99772-1|CAB16921.1| 794|Caenorhabditis elegans Hypothetical pr... 26 7.7
Z77136-8|CAB00885.2| 278|Caenorhabditis elegans Hypothetical pr... 26 7.7
Z75550-14|CAA99932.1| 794|Caenorhabditis elegans Hypothetical p... 26 7.7
Z50044-7|CAA90359.1| 1415|Caenorhabditis elegans Hypothetical pr... 26 7.7
U53180-3|AAA96284.1| 727|Caenorhabditis elegans Hypothetical pr... 26 7.7
U40028-5|AAA81116.1| 137|Caenorhabditis elegans Hmg protein 11 ... 26 7.7
U23515-7|AAK93859.3| 868|Caenorhabditis elegans Larp (rna bindi... 26 7.7
U23515-6|ABC71805.1| 1065|Caenorhabditis elegans Larp (rna bindi... 26 7.7
AF056578-1|AAC78600.1| 137|Caenorhabditis elegans high mobility... 26 7.7
AF035197-1|AAC17865.1| 1415|Caenorhabditis elegans ZYG-9 protein. 26 7.7
>U00063-8|AAM48535.1| 1031|Caenorhabditis elegans Hypothetical protein
F56C9.10b protein.
Length = 1031
Score = 33.1 bits (72), Expect = 0.051
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +2
Query: 86 DGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQ 235
+ ST + G G + G K +KK+ PPA+AP S KSS ++
Sbjct: 960 ESSTPFARNGSGSSSSTGATGG-KSLKKKKTPPASAPLPTSSTKSSQKDK 1008
>U00063-7|AAK18965.1| 1028|Caenorhabditis elegans Hypothetical protein
F56C9.10a protein.
Length = 1028
Score = 33.1 bits (72), Expect = 0.051
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +2
Query: 86 DGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQ 235
+ ST + G G + G K +KK+ PPA+AP S KSS ++
Sbjct: 957 ESSTPFARNGSGSSSSTGATGG-KSLKKKKTPPASAPLPTSSTKSSQKDK 1005
>AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical
protein Y55B1BR.3 protein.
Length = 679
Score = 32.3 bits (70), Expect = 0.089
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Frame = +2
Query: 65 EFNKMSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPK----TKESAKSSDDE 232
E K S S +K+ +A+ ++ E EVKK + P PK +ES +SS DE
Sbjct: 314 EEEKSSKKRSKKSKKESDEEQQASDSEEEVVEVKKNSKSPKKTPKKTAVKEESEESSGDE 373
Query: 233 QAPV 244
+ V
Sbjct: 374 EEEV 377
>AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical
protein Y18D10A.1 protein.
Length = 1634
Score = 31.9 bits (69), Expect = 0.12
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +2
Query: 86 DGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQ 235
+ +A K+GRGRP++ T S T++ + AA ++K + ++EQ
Sbjct: 565 EAPSAPVKRGRGRPRSRSTMSITED-SEPSTSSTAAKRSKRAESDEEEEQ 613
>U64608-2|AAB04591.1| 537|Caenorhabditis elegans Hypothetical
protein T22B7.4 protein.
Length = 537
Score = 31.1 bits (67), Expect = 0.21
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +2
Query: 101 VEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESA--KSSDDE 232
++ K RG+ K + +TK +K+ P APK E+ +S+DDE
Sbjct: 308 IQAKNRGKSKDKLKEEKTKSLKEEKDIPGPAPKPLETVFYESTDDE 353
>AL117204-13|CAB55128.1| 286|Caenorhabditis elegans Hypothetical
protein Y116A8C.22 protein.
Length = 286
Score = 30.3 bits (65), Expect = 0.36
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 8/44 (18%)
Frame = +2
Query: 107 KKGRGRPKANGTQSETK--------EVKKRGRPPAAAPKTKESA 214
K+GRGRP+ ++ + + E KKRGRP AA ++E A
Sbjct: 95 KRGRGRPRKQSSEEKVQIPKVVVKFEPKKRGRPAGAAKWSQEVA 138
>Z73912-8|CAA98148.1| 1016|Caenorhabditis elegans Hypothetical protein
ZK524.4 protein.
Length = 1016
Score = 29.9 bits (64), Expect = 0.47
Identities = 18/73 (24%), Positives = 28/73 (38%)
Frame = +2
Query: 26 VTFCCERCYFALFEFNKMSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTK 205
+T +C E NK DD G+ +GT S T K+ AP++
Sbjct: 799 LTMLSSKCASKFDEKNKKDDDDEANGGTTGKRGNSGSGTTSLTVTGKQSNNQSGIAPQSN 858
Query: 206 ESAKSSDDEQAPV 244
E + +D P+
Sbjct: 859 EKRSTLNDSVLPL 871
>Z72517-7|CAA96698.1| 1016|Caenorhabditis elegans Hypothetical protein
ZK524.4 protein.
Length = 1016
Score = 29.9 bits (64), Expect = 0.47
Identities = 18/73 (24%), Positives = 28/73 (38%)
Frame = +2
Query: 26 VTFCCERCYFALFEFNKMSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTK 205
+T +C E NK DD G+ +GT S T K+ AP++
Sbjct: 799 LTMLSSKCASKFDEKNKKDDDDEANGGTTGKRGNSGSGTTSLTVTGKQSNNQSGIAPQSN 858
Query: 206 ESAKSSDDEQAPV 244
E + +D P+
Sbjct: 859 EKRSTLNDSVLPL 871
>AF125460-1|AAD12847.3| 456|Caenorhabditis elegans Hypothetical
protein Y9D1A.1 protein.
Length = 456
Score = 29.9 bits (64), Expect = 0.47
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +2
Query: 68 FNKMSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKT 202
+NK ++GS ++ GR P+ +G + + RG P + KT
Sbjct: 242 YNKDDEEGSGRKDRAGRVGPEGSGRKDRDETTMVRGSPETSTIKT 286
Score = 27.1 bits (57), Expect = 3.3
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +2
Query: 68 FNKMSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRP 181
+NK ++GS ++ GR P+ +G + + RG P
Sbjct: 77 YNKDDEEGSGRKDRAGRIGPEGSGRKDRNETTMVRGSP 114
>Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical
protein F47A4.2 protein.
Length = 3498
Score = 29.5 bits (63), Expect = 0.63
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +2
Query: 86 DGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQAPV 244
D + ++K+ +N S+ V PPAA K KES + + +E V
Sbjct: 640 DSNDKIDKEPNASSTSNDETSKDDTVPMESDPPAATEKPKESTEITTEEPLEV 692
>AL021172-1|CAA15962.1| 315|Caenorhabditis elegans Hypothetical
protein Y17G7A.1 protein.
Length = 315
Score = 29.5 bits (63), Expect = 0.63
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +2
Query: 77 MSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQAPV 244
++D GS+ V KKGRGRP N + + K+GR A ++ + D +PV
Sbjct: 111 VNDTGSSPV-KKGRGRPIKNPSADAGSPLVKKGRGRRAQTPAADT-DAIDTASSPV 164
Score = 27.1 bits (57), Expect = 3.3
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 86 DGSTAVEKKGRGRPKANGTQSETKEVKKRGR 178
D +++ KKGRGRP N + + K+GR
Sbjct: 158 DTASSPVKKGRGRPAKNPSADAGSPLVKKGR 188
>AF056579-1|AAC78601.1| 315|Caenorhabditis elegans high mobility
group protein I beta protein.
Length = 315
Score = 29.5 bits (63), Expect = 0.63
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +2
Query: 77 MSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQAPV 244
++D GS+ V KKGRGRP N + + K+GR A ++ + D +PV
Sbjct: 111 VNDTGSSPV-KKGRGRPIKNPSADAGSPLVKKGRGRRAQTPAADT-DAIDTASSPV 164
Score = 27.1 bits (57), Expect = 3.3
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 86 DGSTAVEKKGRGRPKANGTQSETKEVKKRGR 178
D +++ KKGRGRP N + + K+GR
Sbjct: 158 DTASSPVKKGRGRPAKNPSADAGSPLVKKGR 188
>Z81038-13|CAB02755.1| 971|Caenorhabditis elegans Hypothetical
protein C25A1.10a protein.
Length = 971
Score = 29.1 bits (62), Expect = 0.83
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +2
Query: 107 KKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQAP 241
KK ++ ++ K+ + P A K + S+ SSDDE+ P
Sbjct: 278 KKADSSSDSSDDEAPAKKTPAKAAPKPVAKKAESSSDSSDDEKKP 322
Score = 27.1 bits (57), Expect = 3.3
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 155 KEVKKRGRPPAAAPKTKESAKSSDDEQAPV 244
K + P A K + S+ SSDDE+ PV
Sbjct: 325 KPTPAKATPKPVAKKAESSSDSSDDEKKPV 354
Score = 27.1 bits (57), Expect = 3.3
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 155 KEVKKRGRPPAAAPKTKESAKSSDDEQAPV 244
K + P A K + S+ SSDDE+ PV
Sbjct: 387 KPTPAKATPKPVAKKAESSSDSSDDEKKPV 416
Score = 27.1 bits (57), Expect = 3.3
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +2
Query: 107 KKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQ 235
KK ++ ++ K+ + P A+ K + S+ SSDDE+
Sbjct: 431 KKADSSSDSSDDEAPAKKTPAKAAPKPASKKAESSSDSSDDEK 473
Score = 26.2 bits (55), Expect = 5.8
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +2
Query: 155 KEVKKRGRPPAAAPKTKESAKSSDDEQAPV 244
K P A K + S+ SSDDE+ PV
Sbjct: 509 KPTPANATPKPVAKKAESSSDSSDDEKKPV 538
Score = 25.8 bits (54), Expect = 7.7
Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Frame = +2
Query: 116 RGRPKANGTQSETKEVKK----RGRPPAAAPKTKESAKSSDDEQAP 241
+ ++ + E K V K + P A K + S+ SSDDE+ P
Sbjct: 339 KAESSSDSSDDEKKPVAKPAPAKATPKPVAKKAESSSDSSDDEKKP 384
>Z92773-4|CAB07130.2| 584|Caenorhabditis elegans Hypothetical
protein W08E3.2 protein.
Length = 584
Score = 27.9 bits (59), Expect = 1.9
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +2
Query: 86 DGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDD 229
D S E++ +G A Q + +E K R + PAA P ++E+ + DD
Sbjct: 230 DESKGEEEEDQGVRPAQKRQVKQQE-KPRKQKPAAPPSSEENEEDEDD 276
>Z81114-8|CAB97236.1| 584|Caenorhabditis elegans Hypothetical
protein W08E3.2 protein.
Length = 584
Score = 27.9 bits (59), Expect = 1.9
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +2
Query: 86 DGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDD 229
D S E++ +G A Q + +E K R + PAA P ++E+ + DD
Sbjct: 230 DESKGEEEEDQGVRPAQKRQVKQQE-KPRKQKPAAPPSSEENEEDEDD 276
>U12964-3|AAA91222.2| 1032|Caenorhabditis elegans Nhl (ring finger
b-box coiled coil)domain containing protein 2 protein.
Length = 1032
Score = 27.9 bits (59), Expect = 1.9
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +2
Query: 38 CERCYFALFEFNKMSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPP 184
CE C A + + + S A+E+K R + ET +VK+R PP
Sbjct: 82 CEDCIIAQLDGHLQAK--SAAIEEKKRATAAMLDCELETPKVKERPTPP 128
>AF036702-14|AAB88378.2| 396|Caenorhabditis elegans Hypothetical
protein F33D4.6a protein.
Length = 396
Score = 27.5 bits (58), Expect = 2.5
Identities = 12/27 (44%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
Frame = +3
Query: 246 LKEVEVD-LKDLRKSLPRARVHQLKEQ 323
++EVE + +K RKSLPR ++H L+++
Sbjct: 317 IEEVEQETIKPKRKSLPRRKIHYLEKK 343
>AF036702-13|AAB88379.2| 648|Caenorhabditis elegans Hypothetical
protein F33D4.6b protein.
Length = 648
Score = 27.5 bits (58), Expect = 2.5
Identities = 12/27 (44%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
Frame = +3
Query: 246 LKEVEVD-LKDLRKSLPRARVHQLKEQ 323
++EVE + +K RKSLPR ++H L+++
Sbjct: 317 IEEVEQETIKPKRKSLPRRKIHYLEKK 343
>Z98853-7|CAB57906.1| 1675|Caenorhabditis elegans Hypothetical protein
C47E8.8 protein.
Length = 1675
Score = 27.1 bits (57), Expect = 3.3
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 134 NGTQSETKEVKKRGRPPAAAPKTKESAKSSD 226
+GT+ + K VK + +PP PK E+ +SD
Sbjct: 1449 SGTKKQEKVVKNKKKPP--TPKANENTTTSD 1477
>Z75530-10|CAA99796.2| 1675|Caenorhabditis elegans Hypothetical
protein C47E8.8 protein.
Length = 1675
Score = 27.1 bits (57), Expect = 3.3
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 134 NGTQSETKEVKKRGRPPAAAPKTKESAKSSD 226
+GT+ + K VK + +PP PK E+ +SD
Sbjct: 1449 SGTKKQEKVVKNKKKPP--TPKANENTTTSD 1477
>Z70213-9|CAA94177.1| 1520|Caenorhabditis elegans Hypothetical protein
K12D12.1 protein.
Length = 1520
Score = 27.1 bits (57), Expect = 3.3
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +2
Query: 65 EFNKMSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKS 220
++ KMS V+K+ + + + E +++KK P AAPKT + KS
Sbjct: 1286 KYEKMSQPKKERVKKEPKEPKEPKKVKKEGQDIKKFMSP--AAPKTAKKEKS 1335
>Z49069-5|CAA88867.1| 1520|Caenorhabditis elegans Hypothetical protein
K12D12.1 protein.
Length = 1520
Score = 27.1 bits (57), Expect = 3.3
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +2
Query: 65 EFNKMSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKS 220
++ KMS V+K+ + + + E +++KK P AAPKT + KS
Sbjct: 1286 KYEKMSQPKKERVKKEPKEPKEPKKVKKEGQDIKKFMSP--AAPKTAKKEKS 1335
>U80441-3|AAB37653.2| 262|Caenorhabditis elegans Hypothetical
protein F27C1.3 protein.
Length = 262
Score = 27.1 bits (57), Expect = 3.3
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +2
Query: 83 DDGSTAVEKKGRGRPKANGTQSETKEV--KKRGRPPAAAPKTKESAKSSDDEQAP 241
DD ++K R + K + ++ K+ K++G+ PA APK ++ + D P
Sbjct: 58 DDDDDEDDEKRRKKKKNDAIAAKKKKAAAKEKGKIPAGAPKPPKNRAAIADTHDP 112
>U58757-12|AAK66021.1| 60|Caenorhabditis elegans Histone h1 like
protein 7, isoformc protein.
Length = 60
Score = 27.1 bits (57), Expect = 3.3
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +2
Query: 98 AVEK-KGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQAP 241
AV+K K + K + + +VKK AAAPK K+ K + +++P
Sbjct: 3 AVQKAKKVAKTKKVAAKPKAPKVKKASPKKAAAPKAKKPVKKAAAKKSP 51
>AL132860-32|CAO82074.1| 570|Caenorhabditis elegans Hypothetical
protein Y56A3A.7b protein.
Length = 570
Score = 27.1 bits (57), Expect = 3.3
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 155 KEVKKRGRPPAAAPKTKESAKSSDDEQAPV 244
+E +K PPAAAP E + +DE++ +
Sbjct: 448 EEDEKLKLPPAAAPSLNEDSVDDEDEESDI 477
>AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical
protein Y26D4A.9 protein.
Length = 1435
Score = 27.1 bits (57), Expect = 3.3
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 134 NGTQSETKEVKKRGRPPAAAPKTKESAKSSDDE 232
N + E++EVKK G+ KTKE + + +E
Sbjct: 711 NKYKKESEEVKKTGKNKDKVEKTKEEVEKAKEE 743
>AF216291-1|AAF23175.1| 60|Caenorhabditis elegans histone H1.Q
protein.
Length = 60
Score = 27.1 bits (57), Expect = 3.3
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +2
Query: 98 AVEK-KGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQAP 241
AV+K K + K + + +VKK AAAPK K+ K + +++P
Sbjct: 3 AVQKAKKVAKTKKVAAKPKAPKVKKASPKKAAAPKAKKPVKKAAAKKSP 51
>Z70036-2|CAE17914.1| 155|Caenorhabditis elegans Hypothetical
protein T01B4.3 protein.
Length = 155
Score = 26.6 bits (56), Expect = 4.4
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +2
Query: 71 NKMSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDE 232
+K D G AV + + K NG ETK+ +R + + ++ +SSDDE
Sbjct: 102 SKEKDPGLAAVVEDEKSAKK-NGRFKETKQKMERFKKLRRSKDRQQLIESSDDE 154
>U41510-8|AAK39385.1| 493|Caenorhabditis elegans Hypothetical
protein ZC449.5 protein.
Length = 493
Score = 26.6 bits (56), Expect = 4.4
Identities = 15/48 (31%), Positives = 20/48 (41%)
Frame = +2
Query: 80 SDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSS 223
S + ST EK +A T SET E + K ++ KSS
Sbjct: 184 STEASTEEEKSTEASEEATTTSSETSETTEESEEEETTTKPAKTHKSS 231
>AC006712-6|AAO21405.1| 765|Caenorhabditis elegans Temporarily
assigned gene nameprotein 332, isoform b protein.
Length = 765
Score = 26.6 bits (56), Expect = 4.4
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 6/57 (10%)
Frame = +2
Query: 89 GSTAVEKKGRGRPKANGTQSETKEV------KKRGRPPAAAPKTKESAKSSDDEQAP 241
GS+++E K G+ K N SE+ + K+R R + + + S SDDE P
Sbjct: 621 GSSSLESKN-GKKKKNFNMSESSDDETSNSRKRRKRESSESQSSSSSDDDSDDEDRP 676
>AC006712-5|AAK39326.2| 851|Caenorhabditis elegans Temporarily
assigned gene nameprotein 332, isoform a protein.
Length = 851
Score = 26.6 bits (56), Expect = 4.4
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 6/57 (10%)
Frame = +2
Query: 89 GSTAVEKKGRGRPKANGTQSETKEV------KKRGRPPAAAPKTKESAKSSDDEQAP 241
GS+++E K G+ K N SE+ + K+R R + + + S SDDE P
Sbjct: 621 GSSSLESKN-GKKKKNFNMSESSDDETSNSRKRRKRESSESQSSSSSDDDSDDEDRP 676
>Z81594-7|CAJ55256.1| 4404|Caenorhabditis elegans Hypothetical protein
ZC247.1 protein.
Length = 4404
Score = 26.2 bits (55), Expect = 5.8
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 231 NRHL*LKEVEVDLKDLRKSLPRARVHQLKEQAVVG 335
NRH L +E + R+S RAR+ ++ E +VG
Sbjct: 4344 NRHEELPMIEDGAMECRRSTVRARLREMDEVRLVG 4378
>Z80221-3|CAB02312.2| 4404|Caenorhabditis elegans Hypothetical protein
ZC247.1 protein.
Length = 4404
Score = 26.2 bits (55), Expect = 5.8
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 231 NRHL*LKEVEVDLKDLRKSLPRARVHQLKEQAVVG 335
NRH L +E + R+S RAR+ ++ E +VG
Sbjct: 4344 NRHEELPMIEDGAMECRRSTVRARLREMDEVRLVG 4378
>Z30215-6|CAF31477.2| 1144|Caenorhabditis elegans Hypothetical
protein F40F12.5 protein.
Length = 1144
Score = 26.2 bits (55), Expect = 5.8
Identities = 13/56 (23%), Positives = 23/56 (41%)
Frame = +2
Query: 74 KMSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQAP 241
+M T++ GR NG Q+ + + PP A P ++ ++ Q P
Sbjct: 555 QMPAASGTSISVPVNGRHNVNGKQASIESLSDPPPPPYAPPSPPRASSAAAAHQQP 610
>U23448-8|AAL27226.1| 849|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform b
protein.
Length = 849
Score = 26.2 bits (55), Expect = 5.8
Identities = 14/49 (28%), Positives = 19/49 (38%)
Frame = +2
Query: 98 AVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQAPV 244
A EKK + A T +K+G P A K K+ Q P+
Sbjct: 259 AKEKKNVSKSYAEHLSKSTAGTQKKGAPIGAEKKQKQELAKKMSNQLPI 307
>U23448-7|AAM81128.1| 868|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform d
protein.
Length = 868
Score = 26.2 bits (55), Expect = 5.8
Identities = 14/49 (28%), Positives = 19/49 (38%)
Frame = +2
Query: 98 AVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQAPV 244
A EKK + A T +K+G P A K K+ Q P+
Sbjct: 259 AKEKKNVSKSYAEHLSKSTAGTQKKGAPIGAEKKQKQELAKKMSNQLPI 307
>U23448-6|AAL27225.1| 915|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform a
protein.
Length = 915
Score = 26.2 bits (55), Expect = 5.8
Identities = 14/49 (28%), Positives = 19/49 (38%)
Frame = +2
Query: 98 AVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQAPV 244
A EKK + A T +K+G P A K K+ Q P+
Sbjct: 259 AKEKKNVSKSYAEHLSKSTAGTQKKGAPIGAEKKQKQELAKKMSNQLPI 307
>U23448-5|AAL27227.1| 912|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform c
protein.
Length = 912
Score = 26.2 bits (55), Expect = 5.8
Identities = 14/49 (28%), Positives = 19/49 (38%)
Frame = +2
Query: 98 AVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQAPV 244
A EKK + A T +K+G P A K K+ Q P+
Sbjct: 258 AKEKKNVSKSYAEHLSKSTAGTQKKGAPIGAEKKQKQELAKKMSNQLPI 306
>AL032619-1|CAJ55259.1| 4404|Caenorhabditis elegans Hypothetical
protein ZC247.1 protein.
Length = 4404
Score = 26.2 bits (55), Expect = 5.8
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 231 NRHL*LKEVEVDLKDLRKSLPRARVHQLKEQAVVG 335
NRH L +E + R+S RAR+ ++ E +VG
Sbjct: 4344 NRHEELPMIEDGAMECRRSTVRARLREMDEVRLVG 4378
>AF068714-1|AAC17808.1| 254|Caenorhabditis elegans Hypothetical
protein B0348.5 protein.
Length = 254
Score = 26.2 bits (55), Expect = 5.8
Identities = 13/47 (27%), Positives = 21/47 (44%)
Frame = +2
Query: 83 DDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSS 223
DD + A +K G P T+ K K + AAAP + + ++
Sbjct: 194 DDAAKANKKTTTGSPSTTSTRKPRKARKPTKKTVAAAPSSSSNTSTT 240
>AC025722-2|AAK68508.1| 605|Caenorhabditis elegans Hypothetical
protein Y50D4C.3 protein.
Length = 605
Score = 26.2 bits (55), Expect = 5.8
Identities = 12/43 (27%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Frame = +2
Query: 110 KGRGRPK--ANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDE 232
KG G PK + G + + +++K + + PKT++ + +DD+
Sbjct: 177 KGTGAPKWISFGKRGQKGQLEKGFKANSVMPKTQKEGEDADDD 219
>Z99772-1|CAB16921.1| 794|Caenorhabditis elegans Hypothetical
protein H05L14.1 protein.
Length = 794
Score = 25.8 bits (54), Expect = 7.7
Identities = 14/54 (25%), Positives = 23/54 (42%)
Frame = +2
Query: 77 MSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQA 238
+SD + K+ +++ KE KK+G A K + S DDE +
Sbjct: 52 VSDPTKKGTTMSTMSQVKSTKSKNHKKEEKKKGSKNDEADSKKPDSASKDDESS 105
>Z77136-8|CAB00885.2| 278|Caenorhabditis elegans Hypothetical
protein ZC376.8 protein.
Length = 278
Score = 25.8 bits (54), Expect = 7.7
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = +2
Query: 74 KMSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQA 238
K ++GS E K + + K+N + + E K+ K K++ K DE A
Sbjct: 100 KSKNEGSKKEEDKEKEKEKSNKAEDKKSEDPKKEDAKKPDVKGKDTFKKPVDESA 154
>Z75550-14|CAA99932.1| 794|Caenorhabditis elegans Hypothetical
protein H05L14.1 protein.
Length = 794
Score = 25.8 bits (54), Expect = 7.7
Identities = 14/54 (25%), Positives = 23/54 (42%)
Frame = +2
Query: 77 MSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQA 238
+SD + K+ +++ KE KK+G A K + S DDE +
Sbjct: 52 VSDPTKKGTTMSTMSQVKSTKSKNHKKEEKKKGSKNDEADSKKPDSASKDDESS 105
>Z50044-7|CAA90359.1| 1415|Caenorhabditis elegans Hypothetical
protein F22B5.7 protein.
Length = 1415
Score = 25.8 bits (54), Expect = 7.7
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = +2
Query: 155 KEVKKRGRPPAAAP--KTKESAKSSDDEQ 235
K + K PPAAAP KT K +DE+
Sbjct: 537 KSIHKADAPPAAAPPKKTAPPKKQPEDEE 565
>U53180-3|AAA96284.1| 727|Caenorhabditis elegans Hypothetical
protein D1014.5 protein.
Length = 727
Score = 25.8 bits (54), Expect = 7.7
Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 7/67 (10%)
Frame = +2
Query: 65 EFNKMSDDGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKT-------KESAKSS 223
E SD+ +T EKK G +++E K + P ++ +E KS+
Sbjct: 242 ETTTTSDESATTTEKKTNGAELVEKSETEEKNGDSSTKSPEVTSESSVDTTTIEEQLKSN 301
Query: 224 DDEQAPV 244
+DE+ V
Sbjct: 302 NDEEKQV 308
>U40028-5|AAA81116.1| 137|Caenorhabditis elegans Hmg protein 11
protein.
Length = 137
Score = 25.8 bits (54), Expect = 7.7
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +2
Query: 104 EKKGRGRPKAN 136
EKKGRGRPK N
Sbjct: 127 EKKGRGRPKKN 137
>U23515-7|AAK93859.3| 868|Caenorhabditis elegans Larp (rna binding
la related protein)homolog protein 1, isoform a protein.
Length = 868
Score = 25.8 bits (54), Expect = 7.7
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +2
Query: 86 DGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQ 235
D S KG+G P+ NG + K ++ A ++ E +S DEQ
Sbjct: 10 DISVDYGSKGKGAPRGNGGE---KGTRRSANDEAVRRRSGEEDSASGDEQ 56
>U23515-6|ABC71805.1| 1065|Caenorhabditis elegans Larp (rna binding
la related protein)homolog protein 1, isoform b protein.
Length = 1065
Score = 25.8 bits (54), Expect = 7.7
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +2
Query: 86 DGSTAVEKKGRGRPKANGTQSETKEVKKRGRPPAAAPKTKESAKSSDDEQ 235
D S KG+G P+ NG + K ++ A ++ E +S DEQ
Sbjct: 207 DISVDYGSKGKGAPRGNGGE---KGTRRSANDEAVRRRSGEEDSASGDEQ 253
>AF056578-1|AAC78600.1| 137|Caenorhabditis elegans high mobility
group protein I alpha protein.
Length = 137
Score = 25.8 bits (54), Expect = 7.7
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +2
Query: 104 EKKGRGRPKAN 136
EKKGRGRPK N
Sbjct: 127 EKKGRGRPKKN 137
>AF035197-1|AAC17865.1| 1415|Caenorhabditis elegans ZYG-9 protein.
Length = 1415
Score = 25.8 bits (54), Expect = 7.7
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = +2
Query: 155 KEVKKRGRPPAAAP--KTKESAKSSDDEQ 235
K + K PPAAAP KT K +DE+
Sbjct: 537 KSIHKADAPPAAAPPKKTAPPKKQPEDEE 565
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,838,999
Number of Sequences: 27780
Number of extensions: 87325
Number of successful extensions: 661
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 573
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 656
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 418861482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -