Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_M08
(433 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_03_0186 + 15243150-15243563,15243685-15243777,15244604-152446... 202 1e-52
07_03_0471 + 18501496-18502104,18503009-18503260,18503367-185035... 39 0.002
04_04_0919 - 29422003-29422267,29422411-29422660,29423163-294234... 36 0.019
04_04_0918 - 29411239-29411373,29412276-29412526,29412772-294130... 35 0.025
10_01_0097 - 1171949-1172047,1172520-1172591,1172791-1172949,117... 34 0.057
04_04_0915 - 29385926-29385952,29386069-29386285,29386367-293866... 33 0.13
04_04_0959 + 29692740-29693035,29693102-29693267,29693433-296936... 31 0.30
11_01_0782 + 6543906-6544702,6545717-6547850 31 0.40
04_04_0917 - 29404341-29404519,29404610-29404744,29404898-294052... 30 0.70
11_06_0557 - 24955837-24956214,24957225-24957395,24957576-249576... 30 0.92
03_05_0169 + 21474655-21474771,21474879-21474971,21475553-214756... 29 1.2
12_02_0928 + 24488891-24489675,24490369-24490421,24490479-244912... 29 2.1
08_02_0502 + 17844775-17845092,17845528-17845634,17846039-178464... 28 2.8
12_01_1033 + 10629897-10632311,10633874-10633879 28 3.7
11_06_0561 - 24984960-24985205,24985283-24985354,24985906-249859... 28 3.7
07_01_0924 - 7764998-7765414 28 3.7
02_04_0516 + 23593088-23593116,23593209-23593336,23593527-235937... 28 3.7
11_04_0305 - 16162063-16162096,16162282-16164365,16165283-161653... 27 6.5
06_02_0144 - 12268981-12269628 27 6.5
01_01_0690 - 5306754-5307047,5307107-5307279,5308223-5308370,530... 27 6.5
10_08_0080 - 14707309-14707420,14707799-14707846,14708418-147085... 27 8.6
06_01_0603 - 4350124-4350590,4350995-4353608 27 8.6
06_01_0454 - 3234331-3236299,3237254-3238074 27 8.6
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 27 8.6
01_06_0551 + 30159789-30159946,30160509-30160629,30160714-301607... 27 8.6
01_06_0298 + 28301032-28302408 27 8.6
>03_03_0186 + 15243150-15243563,15243685-15243777,15244604-15244666,
15245028-15245114,15245197-15245349,15245422-15245579,
15246458-15246692,15246782-15246892,15246942-15246968,
15247269-15248327,15248432-15248692,15249011-15249196,
15249642-15250793,15250886-15251236,15251343-15251738
Length = 1581
Score = 202 bits (493), Expect = 1e-52
Identities = 90/141 (63%), Positives = 112/141 (79%)
Frame = +1
Query: 10 LLLQNPQDGRSRLKRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDA 189
+LLQ +DG +RLKR I+IGDHHQLPPVVKNMAFQKY +M+QSLFTR VRLGVPY+EL+A
Sbjct: 1154 MLLQRQEDGYARLKRCILIGDHHQLPPVVKNMAFQKYSHMDQSLFTRFVRLGVPYIELNA 1213
Query: 190 QGRARPSICNLYRWRYLALGDLGHVTRLPEYHAANAGLRHDFQLINVDDFNGAGETEPRP 369
QGRARPSI LY WRY LGDL +V +H AN+G +D+QL++V DF G GE+ P P
Sbjct: 1214 QGRARPSIAELYNWRYRELGDLPYVREEAIFHKANSGFSYDYQLVDVPDFRGRGESAPSP 1273
Query: 370 YLYQNLAEPEYVVAVFMYMRL 432
+ YQN E E++V+V++YMRL
Sbjct: 1274 WFYQNEGEAEFIVSVYIYMRL 1294
>07_03_0471 +
18501496-18502104,18503009-18503260,18503367-18503537,
18503693-18503743,18503868-18503960,18504125-18504220,
18504318-18504368,18504452-18504570,18504909-18505017,
18505391-18505513,18505590-18505661,18505963-18506034,
18506125-18506191,18506260-18506402,18506494-18506565,
18506632-18506760,18507317-18507472,18507579-18507692,
18507791-18507889,18507974-18508051,18508402-18508536,
18509081-18509155,18509247-18509361,18509458-18509828,
18509903-18509965,18510049-18510120,18510285-18510413,
18510512-18510628,18510902-18511018
Length = 1289
Score = 38.7 bits (86), Expect = 0.002
Identities = 21/56 (37%), Positives = 31/56 (55%)
Frame = +1
Query: 46 LKRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARPSI 213
+K+ +++GDH QL PV+ + + QSLF R+V LGV L Q R P +
Sbjct: 698 VKQVVLVGDHCQLGPVIMCKKAAR-AGLAQSLFERLVILGVKPFRLQVQYRMHPCL 752
>04_04_0919 -
29422003-29422267,29422411-29422660,29423163-29423481,
29423625-29424794,29424879-29425388,29425449-29425607
Length = 890
Score = 35.5 bits (78), Expect = 0.019
Identities = 24/58 (41%), Positives = 31/58 (53%)
Frame = +1
Query: 40 SRLKRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARPSI 213
S LK ++IGD QLP VK+ A + +SLF R+ LG L+ Q R PSI
Sbjct: 592 SGLKHAVLIGDECQLPATVKSKAADG-ALLGRSLFERLTLLGHQKHLLNMQYRMHPSI 648
>04_04_0918 -
29411239-29411373,29412276-29412526,29412772-29413009,
29413133-29414251,29414540-29415106
Length = 769
Score = 35.1 bits (77), Expect = 0.025
Identities = 23/56 (41%), Positives = 30/56 (53%)
Frame = +1
Query: 46 LKRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARPSI 213
LK I+IGD QLP VK+ + + +SLF R+ LG L+ Q R PSI
Sbjct: 543 LKHAILIGDECQLPATVKSKVCED-ASFGRSLFERLSSLGHEKHLLNMQYRMHPSI 597
>10_01_0097 - 1171949-1172047,1172520-1172591,1172791-1172949,
1172998-1173381,1173478-1175253,1175329-1175452,
1176859-1177027,1177131-1177226,1177339-1177527,
1177965-1179303
Length = 1468
Score = 33.9 bits (74), Expect = 0.057
Identities = 33/124 (26%), Positives = 50/124 (40%), Gaps = 2/124 (1%)
Frame = +1
Query: 52 RWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARPSICNLYRW 231
R +++GD QLP V + A +SLF R G P + L Q R P I
Sbjct: 1016 RCVLVGDPQQLPATVISKAAGTLM-YSRSLFERFQLSGCPTILLSVQYRMHPQIREFPSR 1074
Query: 232 RYL--ALGDLGHVTRLPEYHAANAGLRHDFQLINVDDFNGAGETEPRPYLYQNLAEPEYV 405
+ L D V +LP+ L + I D +G YQN+ E ++V
Sbjct: 1075 HFYQGRLTDSESVVKLPDEAYYRDALMAPY--IFYDISHGRESHRGGSSSYQNVHEAQFV 1132
Query: 406 VAVF 417
+ ++
Sbjct: 1133 LRLY 1136
>04_04_0915 -
29385926-29385952,29386069-29386285,29386367-29386622,
29386745-29387072,29387157-29387587,29388014-29388163,
29388212-29388398,29388709-29388750,29389007-29389555,
29389778-29390032
Length = 813
Score = 32.7 bits (71), Expect = 0.13
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = +1
Query: 46 LKRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARPSI 213
+K+ + IGD QLP +VK+ + +S+F R+ LG L+ Q R RP I
Sbjct: 519 IKQAVFIGDECQLPALVKS-KISDNADFGRSVFERLSSLGYNKHLLNIQYRMRPEI 573
>04_04_0959 + 29692740-29693035,29693102-29693267,29693433-29693612,
29693703-29693771,29693888-29694088,29694187-29694240,
29694325-29694386,29694488-29694620,29694789-29694899,
29695008-29695104,29695638-29695714,29696129-29696194,
29696431-29696583,29697392-29697447,29697524-29697584,
29697656-29697766,29698010-29698144,29698217-29698447,
29699001-29699075,29699161-29699282,29699381-29699453,
29699538-29699642,29699728-29699895,29700079-29700148,
29700224-29700375,29700574-29700651,29700744-29700836,
29700961-29701098,29701237-29701276,29701350-29701423,
29701777-29701911,29702345-29702464,29702778-29702939
Length = 1287
Score = 31.5 bits (68), Expect = 0.30
Identities = 13/34 (38%), Positives = 25/34 (73%)
Frame = +1
Query: 52 RWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRM 153
+++++GDH+QLPP+V++ ++ M SLF R+
Sbjct: 1019 KFVLVGDHYQLPPLVQSSEAREN-GMGVSLFWRL 1051
>11_01_0782 + 6543906-6544702,6545717-6547850
Length = 976
Score = 31.1 bits (67), Expect = 0.40
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +1
Query: 211 ICNLYRWRYLALGDLGHVTRLPE 279
+CNL+ RYL+LG G VT+LPE
Sbjct: 582 VCNLFLLRYLSLG--GKVTKLPE 602
>04_04_0917 -
29404341-29404519,29404610-29404744,29404898-29405225,
29405313-29405532,29405653-29406647,29407233-29407493,
29407534-29407872,29409309-29409497
Length = 881
Score = 30.3 bits (65), Expect = 0.70
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +1
Query: 58 IMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARPSI 213
++IGD +QLP +VK+ +S+F R+ LG L+ Q R P I
Sbjct: 653 VLIGDEYQLPALVKSKIADN-AFFGRSVFERLSLLGYSKHLLNVQYRMHPEI 703
>11_06_0557 -
24955837-24956214,24957225-24957395,24957576-24957635,
24958419-24958623,24958710-24958953,24959103-24959394,
24959734-24960828,24960915-24961409,24961665-24961823,
24961893-24962387
Length = 1197
Score = 29.9 bits (64), Expect = 0.92
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +1
Query: 58 IMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARPSI 213
+++GDH L P+VK K +SLF R++ L +L Q P I
Sbjct: 733 VLLGDHQHLQPIVKTEGC-KEAGCTRSLFQRLLHLSFTRHKLIKQYMMHPLI 783
>03_05_0169 +
21474655-21474771,21474879-21474971,21475553-21475642,
21475728-21475811,21476088-21476252,21476995-21477182,
21477363-21477435,21477766-21477819,21478019-21478276,
21478891-21479097,21479293-21479396,21479809-21479953,
21480108-21480242,21480610-21480783
Length = 628
Score = 29.5 bits (63), Expect = 1.2
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +1
Query: 52 RWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRM 153
R ++ GDH QLPP +++ +K M ++LF R+
Sbjct: 377 RCVLAGDHLQLPPTIQSAEAEKK-GMGKTLFERL 409
>12_02_0928 +
24488891-24489675,24490369-24490421,24490479-24491229,
24491322-24491533,24491780-24492570,24492686-24492784
Length = 896
Score = 28.7 bits (61), Expect = 2.1
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 196 RARPSICNLYRWRYLALGDLGHVTRLPE 279
R PS+C+L R +YL + ++T LPE
Sbjct: 779 RLPPSVCSLKRLKYLDISQCVNLTDLPE 806
>08_02_0502 +
17844775-17845092,17845528-17845634,17846039-17846492,
17846623-17846694,17846804-17846925,17847079-17847294,
17847392-17847500,17847618-17847730,17847916-17848063,
17848274-17848396
Length = 593
Score = 28.3 bits (60), Expect = 2.8
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -1
Query: 88 AVAGDGRLSLSSVSVSTDRPVGSAVAALV 2
A AG GR++L+ V+ DRP+G A V
Sbjct: 66 AEAGTGRMNLNEYMVAVDRPLGVRFALAV 94
>12_01_1033 + 10629897-10632311,10633874-10633879
Length = 806
Score = 27.9 bits (59), Expect = 3.7
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 211 ICNLYRWRYLALGDLGHVTRLPE 279
IC L+ RYL++G +VT LP+
Sbjct: 342 ICKLWNLRYLSIGMSSNVTMLPD 364
>11_06_0561 -
24984960-24985205,24985283-24985354,24985906-24985977,
24986612-24986782,24987464-24987653,24987733-24987976,
24988162-24988474,24988687-24989517,24989628-24989672,
24989677-24989790,24989877-24990371,24990627-24990824,
24990902-24991357
Length = 1148
Score = 27.9 bits (59), Expect = 3.7
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = +1
Query: 58 IMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARPSI 213
+M GDH L P+VK+ K SLF R++ L Q PSI
Sbjct: 698 VMFGDHLHLQPMVKSEVC-KEAGYASSLFQRLMHSSSENKRLTKQYMMDPSI 748
>07_01_0924 - 7764998-7765414
Length = 138
Score = 27.9 bits (59), Expect = 3.7
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +3
Query: 24 PTGRSVETETLDNDRRPSPATACGEEHGFPK 116
P ++ + L + RP P +CG G PK
Sbjct: 67 PLPNTIAADVLSSRSRPDPQASCGGSGGMPK 97
>02_04_0516 +
23593088-23593116,23593209-23593336,23593527-23593714,
23593861-23593919,23594997-23595345,23596081-23596333,
23596404-23597476
Length = 692
Score = 27.9 bits (59), Expect = 3.7
Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = +1
Query: 70 DHHQLPPVVKNMAFQKYCNMEQS---LFTRMVRLGVPYVELDAQGRARPSICNL 222
DH ++ VV+ Y N+++ L ++ LGVP + + RP +C +
Sbjct: 423 DHEEIKNVVRKFPAFAYYNVDRKIKPLVALLLELGVPRSNIPGIIKKRPQLCGI 476
>11_04_0305 -
16162063-16162096,16162282-16164365,16165283-16165351,
16168317-16169288,16169548-16169650,16170427-16170509
Length = 1114
Score = 27.1 bits (57), Expect = 6.5
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Frame = +1
Query: 172 YVELDAQG---RARPSICNLYRWRYLALGDLGHVTRLPE 279
Y++++A G + SI L + RYL+LGD H+ +PE
Sbjct: 687 YIDINACGNLVQLPKSILKLRQLRYLSLGDT-HINAIPE 724
>06_02_0144 - 12268981-12269628
Length = 215
Score = 27.1 bits (57), Expect = 6.5
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = -3
Query: 401 YSGSARF*YKYGLGSVSPAPLKSSTLMSWKSCRRPALAAWYS 276
+ G+A YG+ S S P + +L+ W RR W S
Sbjct: 157 FFGAALLGVSYGIVSASWDPAREGSLLGWNEARRNWPVFWDS 198
>01_01_0690 -
5306754-5307047,5307107-5307279,5308223-5308370,
5309110-5309356,5309694-5309839,5312482-5312707,
5313652-5313874,5314054-5314202,5315345-5315514,
5316064-5316135,5317610-5317741,5317813-5317900,
5319440-5319656,5320123-5320306,5320644-5320727,
5321148-5321242,5321519-5321562,5321707-5322367,
5323053-5323356
Length = 1218
Score = 27.1 bits (57), Expect = 6.5
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 100 NMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGR 198
N+AF Y +ME S+ RM+ G+P E Q R
Sbjct: 733 NIAFN-YADMEDSMPARMILSGIPLEESYLQSR 764
>10_08_0080 -
14707309-14707420,14707799-14707846,14708418-14708543,
14708586-14708743
Length = 147
Score = 26.6 bits (56), Expect = 8.6
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -3
Query: 269 RVT*PRSPSARYRQRYRLQILGLARP-*ASNST*GTPSLT 153
RV RSPS R+RYR G + AS+ G+PSLT
Sbjct: 23 RVNARRSPSLDQRRRYRASTAGPPQSLRASSRRGGSPSLT 62
>06_01_0603 - 4350124-4350590,4350995-4353608
Length = 1026
Score = 26.6 bits (56), Expect = 8.6
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 286 AANAGLRHDFQLINVDDFNGAGETEPRPYLYQNLAE 393
AA R +L++V+D+ A E E Y+ LAE
Sbjct: 634 AAARAKRQSVRLVDVEDYQAAAEREHPRISYRELAE 669
>06_01_0454 - 3234331-3236299,3237254-3238074
Length = 929
Score = 26.6 bits (56), Expect = 8.6
Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +1
Query: 262 VTRLPEYHAANAGLRHDFQLINVDDFNGAGETEPRPYLYQNL-AEPEYVVAVFMYMR 429
++RL E +++A +HD +++++ G G+T +Y + AE EY V + R
Sbjct: 180 ISRL-EQESSSAAAQHDVRMVSIVGCAGLGKTTLAKQVYDKIKAEFEYKAFVSVSQR 235
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 26.6 bits (56), Expect = 8.6
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 222 VSLAVPGTG*PRSRDPLARVPRRQCRPPARLPAH 323
V L P PR R P P+R+ +PP + AH
Sbjct: 364 VHLRPPSIPQPRGRAPNPSPPKRRPQPPEPMAAH 397
>01_06_0551 +
30159789-30159946,30160509-30160629,30160714-30160788,
30160877-30161028,30161103-30161208,30161298-30161363,
30161623-30161694,30161849-30161932,30162108-30162206,
30162841-30162888,30162986-30163039,30163137-30163235,
30163321-30163410,30163503-30163580,30163699-30163773,
30163866-30163956,30164282-30164410,30164501-30164589
Length = 561
Score = 26.6 bits (56), Expect = 8.6
Identities = 17/63 (26%), Positives = 31/63 (49%)
Frame = +1
Query: 10 LLLQNPQDGRSRLKRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDA 189
+ + + Q+G RL ++I + +L PVV + C S+F+R L Y+ L
Sbjct: 112 MAMMDLQEGNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFSRPQGL---YISLKE 168
Query: 190 QGR 198
+G+
Sbjct: 169 KGK 171
>01_06_0298 + 28301032-28302408
Length = 458
Score = 26.6 bits (56), Expect = 8.6
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 10/66 (15%)
Frame = +1
Query: 163 GVPYVELDAQGRARPSICNLYRWRYLALGDLGHVTRLPEY----------HAANAGLRHD 312
G+P +++D R + WR + +GDLG +T + H A AGLR
Sbjct: 176 GLPELDMDELRPLRIYTSDQEMWRQMLVGDLGSMTEKAPWVFVNTFDELEHEAVAGLRKH 235
Query: 313 FQLINV 330
LI V
Sbjct: 236 IPLIPV 241
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,980,595
Number of Sequences: 37544
Number of extensions: 302335
Number of successful extensions: 971
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 942
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 967
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 814473264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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