Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_M08
(433 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC127112-1|AAI27113.1| 1485|Homo sapiens aquarius homolog (mouse... 240 1e-63
BC127111-1|AAI27112.1| 1485|Homo sapiens aquarius homolog (mouse... 240 1e-63
BC108262-1|AAI08263.1| 464|Homo sapiens AQR protein protein. 240 1e-63
BC036913-1|AAH36913.1| 591|Homo sapiens AQR protein protein. 240 1e-63
AB011132-1|BAA25486.3| 1521|Homo sapiens KIAA0560 protein protein. 240 1e-63
AL049766-4|CAC33877.1| 1918|Homo sapiens zinc finger, NFX1-type ... 50 4e-06
AL049766-3|CAI22429.1| 1270|Homo sapiens zinc finger, NFX1-type ... 50 4e-06
AK023836-1|BAB14696.1| 1137|Homo sapiens protein ( Homo sapiens ... 50 4e-06
AB037825-1|BAA92642.1| 1925|Homo sapiens KIAA1404 protein protein. 50 4e-06
U65533-1|AAC50771.1| 1118|Homo sapiens regulator of nonsense tra... 43 5e-04
U59323-1|AAC51140.1| 1118|Homo sapiens homolog of yeast UPF1 pro... 43 5e-04
D86988-1|BAA19664.2| 1151|Homo sapiens KIAA0221 protein. 43 5e-04
BC039817-1|AAH39817.1| 1118|Homo sapiens UPF1 regulator of nonse... 43 5e-04
AF074016-1|AAC26788.1| 1118|Homo sapiens nonsense-mediated mRNA ... 43 5e-04
AC003972-1|AAB94785.1| 1118|Homo sapiens pNORF1 protein. 43 5e-04
D42046-1|BAA07647.1| 1077|Homo sapiens KIAA0083 protein. 41 0.002
BC053574-1|AAH53574.1| 494|Homo sapiens DNA2L protein protein. 41 0.002
BC041115-1|AAH41115.1| 435|Homo sapiens DNA2L protein protein. 41 0.002
BC028188-1|AAH28188.1| 378|Homo sapiens Unknown (protein for IM... 41 0.002
AL136233-5|CAI17238.1| 1040|Homo sapiens DNA2 DNA replication he... 41 0.002
AL136233-4|CAI17237.1| 374|Homo sapiens DNA2 DNA replication he... 41 0.002
AK126054-1|BAC86416.1| 926|Homo sapiens protein ( Homo sapiens ... 38 0.015
BC106017-1|AAI06018.1| 867|Homo sapiens SETX protein protein. 37 0.026
BC078166-1|AAH78166.1| 917|Homo sapiens SETX protein protein. 37 0.026
BC032622-1|AAH32622.2| 1030|Homo sapiens SETX protein protein. 37 0.026
BC032600-1|AAH32600.1| 828|Homo sapiens SETX protein protein. 37 0.026
AY362728-1|AAR13367.1| 2677|Homo sapiens ataxia/oculomotor aprax... 37 0.026
AL353701-2|CAM14151.1| 2677|Homo sapiens senataxin protein. 37 0.026
AL159997-5|CAI40857.1| 948|Homo sapiens senataxin protein. 37 0.026
AL159997-2|CAI40854.1| 2677|Homo sapiens senataxin protein. 37 0.026
AK001456-1|BAA91701.1| 828|Homo sapiens protein ( Homo sapiens ... 37 0.026
AB014525-1|BAA31600.2| 2663|Homo sapiens KIAA0625 protein protein. 37 0.026
BC150283-1|AAI50284.1| 2080|Homo sapiens peroxisomal proliferato... 33 0.32
AL121829-16|CAI95749.1| 2080|Homo sapiens RP4-697K14.7 protein. 33 0.32
AK074171-1|BAB84997.1| 1124|Homo sapiens FLJ00244 protein protein. 33 0.32
AK055611-1|BAB70969.1| 413|Homo sapiens protein ( Homo sapiens ... 33 0.32
AF517673-1|AAM74197.1| 2080|Homo sapiens peroxisomal proliferato... 33 0.32
AB201715-1|BAE46995.1| 2649|Homo sapiens PPAR gamma DBD-interact... 33 0.32
AB051556-1|BAB21860.2| 2114|Homo sapiens KIAA1769 protein protein. 33 0.32
AF399572-1|AAK95057.1| 214|Homo sapiens olfactory receptor prot... 32 0.96
AB065880-1|BAC06098.1| 310|Homo sapiens seven transmembrane hel... 32 0.96
AL450303-4|CAH71665.1| 320|Homo sapiens olfactory receptor, fam... 31 2.2
AB065960-1|BAC06172.1| 320|Homo sapiens seven transmembrane hel... 31 2.2
AL450303-3|CAH71664.1| 320|Homo sapiens olfactory receptor, fam... 30 2.9
AB065961-1|BAC06173.1| 320|Homo sapiens seven transmembrane hel... 30 2.9
>BC127112-1|AAI27113.1| 1485|Homo sapiens aquarius homolog (mouse)
protein.
Length = 1485
Score = 240 bits (588), Expect = 1e-63
Identities = 110/141 (78%), Positives = 120/141 (85%)
Frame = +1
Query: 10 LLLQNPQDGRSRLKRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDA 189
LLLQNPQDG SRLKRWIMIGDHHQLPPV+KNMAFQKY NMEQSLFTR VR+GVP V+LDA
Sbjct: 1076 LLLQNPQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPTVDLDA 1135
Query: 190 QGRARPSICNLYRWRYLALGDLGHVTRLPEYHAANAGLRHDFQLINVDDFNGAGETEPRP 369
QGRAR S+CNLY WRY LG+L HV LPE+ ANAGL +DFQLINV+DF G GE+EP P
Sbjct: 1136 QGRARASLCNLYNWRYKNLGNLPHVQLLPEFSTANAGLLYDFQLINVEDFQGVGESEPNP 1195
Query: 370 YLYQNLAEPEYVVAVFMYMRL 432
Y YQNL E EYVVA+FMYM L
Sbjct: 1196 YFYQNLGEAEYVVALFMYMCL 1216
>BC127111-1|AAI27112.1| 1485|Homo sapiens aquarius homolog (mouse)
protein.
Length = 1485
Score = 240 bits (588), Expect = 1e-63
Identities = 110/141 (78%), Positives = 120/141 (85%)
Frame = +1
Query: 10 LLLQNPQDGRSRLKRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDA 189
LLLQNPQDG SRLKRWIMIGDHHQLPPV+KNMAFQKY NMEQSLFTR VR+GVP V+LDA
Sbjct: 1076 LLLQNPQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPTVDLDA 1135
Query: 190 QGRARPSICNLYRWRYLALGDLGHVTRLPEYHAANAGLRHDFQLINVDDFNGAGETEPRP 369
QGRAR S+CNLY WRY LG+L HV LPE+ ANAGL +DFQLINV+DF G GE+EP P
Sbjct: 1136 QGRARASLCNLYNWRYKNLGNLPHVQLLPEFSTANAGLLYDFQLINVEDFQGVGESEPNP 1195
Query: 370 YLYQNLAEPEYVVAVFMYMRL 432
Y YQNL E EYVVA+FMYM L
Sbjct: 1196 YFYQNLGEAEYVVALFMYMCL 1216
>BC108262-1|AAI08263.1| 464|Homo sapiens AQR protein protein.
Length = 464
Score = 240 bits (588), Expect = 1e-63
Identities = 110/141 (78%), Positives = 120/141 (85%)
Frame = +1
Query: 10 LLLQNPQDGRSRLKRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDA 189
LLLQNPQDG SRLKRWIMIGDHHQLPPV+KNMAFQKY NMEQSLFTR VR+GVP V+LDA
Sbjct: 55 LLLQNPQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPTVDLDA 114
Query: 190 QGRARPSICNLYRWRYLALGDLGHVTRLPEYHAANAGLRHDFQLINVDDFNGAGETEPRP 369
QGRAR S+CNLY WRY LG+L HV LPE+ ANAGL +DFQLINV+DF G GE+EP P
Sbjct: 115 QGRARASLCNLYNWRYKNLGNLPHVQLLPEFSTANAGLLYDFQLINVEDFQGVGESEPNP 174
Query: 370 YLYQNLAEPEYVVAVFMYMRL 432
Y YQNL E EYVVA+FMYM L
Sbjct: 175 YFYQNLGEAEYVVALFMYMCL 195
>BC036913-1|AAH36913.1| 591|Homo sapiens AQR protein protein.
Length = 591
Score = 240 bits (588), Expect = 1e-63
Identities = 110/141 (78%), Positives = 120/141 (85%)
Frame = +1
Query: 10 LLLQNPQDGRSRLKRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDA 189
LLLQNPQDG SRLKRWIMIGDHHQLPPV+KNMAFQKY NMEQSLFTR VR+GVP V+LDA
Sbjct: 182 LLLQNPQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPTVDLDA 241
Query: 190 QGRARPSICNLYRWRYLALGDLGHVTRLPEYHAANAGLRHDFQLINVDDFNGAGETEPRP 369
QGRAR S+CNLY WRY LG+L HV LPE+ ANAGL +DFQLINV+DF G GE+EP P
Sbjct: 242 QGRARASLCNLYNWRYKNLGNLPHVQLLPEFSTANAGLLYDFQLINVEDFQGVGESEPNP 301
Query: 370 YLYQNLAEPEYVVAVFMYMRL 432
Y YQNL E EYVVA+FMYM L
Sbjct: 302 YFYQNLGEAEYVVALFMYMCL 322
>AB011132-1|BAA25486.3| 1521|Homo sapiens KIAA0560 protein protein.
Length = 1521
Score = 240 bits (588), Expect = 1e-63
Identities = 110/141 (78%), Positives = 120/141 (85%)
Frame = +1
Query: 10 LLLQNPQDGRSRLKRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDA 189
LLLQNPQDG SRLKRWIMIGDHHQLPPV+KNMAFQKY NMEQSLFTR VR+GVP V+LDA
Sbjct: 1112 LLLQNPQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPTVDLDA 1171
Query: 190 QGRARPSICNLYRWRYLALGDLGHVTRLPEYHAANAGLRHDFQLINVDDFNGAGETEPRP 369
QGRAR S+CNLY WRY LG+L HV LPE+ ANAGL +DFQLINV+DF G GE+EP P
Sbjct: 1172 QGRARASLCNLYNWRYKNLGNLPHVQLLPEFSTANAGLLYDFQLINVEDFQGVGESEPNP 1231
Query: 370 YLYQNLAEPEYVVAVFMYMRL 432
Y YQNL E EYVVA+FMYM L
Sbjct: 1232 YFYQNLGEAEYVVALFMYMCL 1252
>AL049766-4|CAC33877.1| 1918|Homo sapiens zinc finger, NFX1-type
containing 1 protein.
Length = 1918
Score = 49.6 bits (113), Expect = 4e-06
Identities = 24/55 (43%), Positives = 32/55 (58%)
Frame = +1
Query: 58 IMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARPSICNL 222
I+IGDH QL P K N+E SLF R+V++ +P+V L+ Q R P I L
Sbjct: 1028 ILIGDHQQLRPSANVYDLAKNFNLEVSLFERLVKVNIPFVRLNYQHRMCPEIARL 1082
>AL049766-3|CAI22429.1| 1270|Homo sapiens zinc finger, NFX1-type
containing 1 protein.
Length = 1270
Score = 49.6 bits (113), Expect = 4e-06
Identities = 24/55 (43%), Positives = 32/55 (58%)
Frame = +1
Query: 58 IMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARPSICNL 222
I+IGDH QL P K N+E SLF R+V++ +P+V L+ Q R P I L
Sbjct: 1028 ILIGDHQQLRPSANVYDLAKNFNLEVSLFERLVKVNIPFVRLNYQHRMCPEIARL 1082
>AK023836-1|BAB14696.1| 1137|Homo sapiens protein ( Homo sapiens
cDNA FLJ13774 fis, clone PLACE4000326, weakly similar to
NAM7 PROTEIN (NONSENSE-MEDIATED MRNA DECAY PROTEIN 1).
).
Length = 1137
Score = 49.6 bits (113), Expect = 4e-06
Identities = 24/55 (43%), Positives = 32/55 (58%)
Frame = +1
Query: 58 IMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARPSICNL 222
I+IGDH QL P K N+E SLF R+V++ +P+V L+ Q R P I L
Sbjct: 320 ILIGDHQQLRPSANVYDLAKNFNLEVSLFERLVKVNIPFVRLNYQHRMCPEIARL 374
>AB037825-1|BAA92642.1| 1925|Homo sapiens KIAA1404 protein protein.
Length = 1925
Score = 49.6 bits (113), Expect = 4e-06
Identities = 24/55 (43%), Positives = 32/55 (58%)
Frame = +1
Query: 58 IMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARPSICNL 222
I+IGDH QL P K N+E SLF R+V++ +P+V L+ Q R P I L
Sbjct: 1035 ILIGDHQQLRPSANVYDLAKNFNLEVSLFERLVKVNIPFVRLNYQHRMCPEIARL 1089
>U65533-1|AAC50771.1| 1118|Homo sapiens regulator of nonsense
transcript stability protein.
Length = 1118
Score = 42.7 bits (96), Expect = 5e-04
Identities = 23/55 (41%), Positives = 32/55 (58%)
Frame = +1
Query: 49 KRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARPSI 213
K+ I++GDH QL PVV K + QSLF R+V LG+ + L Q R P++
Sbjct: 655 KQLILVGDHCQLGPVVMCKKAAK-AGLSQSLFERLVVLGIRPIRLQVQYRMHPAL 708
>U59323-1|AAC51140.1| 1118|Homo sapiens homolog of yeast UPF1
protein.
Length = 1118
Score = 42.7 bits (96), Expect = 5e-04
Identities = 23/55 (41%), Positives = 32/55 (58%)
Frame = +1
Query: 49 KRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARPSI 213
K+ I++GDH QL PVV K + QSLF R+V LG+ + L Q R P++
Sbjct: 655 KQLILVGDHCQLGPVVMCKKAAK-AGLSQSLFERLVVLGIRPIRLQVQYRMHPAL 708
>D86988-1|BAA19664.2| 1151|Homo sapiens KIAA0221 protein.
Length = 1151
Score = 42.7 bits (96), Expect = 5e-04
Identities = 23/55 (41%), Positives = 32/55 (58%)
Frame = +1
Query: 49 KRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARPSI 213
K+ I++GDH QL PVV K + QSLF R+V LG+ + L Q R P++
Sbjct: 688 KQLILVGDHCQLGPVVMCKKAAK-AGLSQSLFERLVVLGIRPIRLQVQYRMHPAL 741
>BC039817-1|AAH39817.1| 1118|Homo sapiens UPF1 regulator of nonsense
transcripts homolog (yeast) protein.
Length = 1118
Score = 42.7 bits (96), Expect = 5e-04
Identities = 23/55 (41%), Positives = 32/55 (58%)
Frame = +1
Query: 49 KRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARPSI 213
K+ I++GDH QL PVV K + QSLF R+V LG+ + L Q R P++
Sbjct: 655 KQLILVGDHCQLGPVVMCKKAAK-AGLSQSLFERLVVLGIRPIRLQVQYRMHPAL 708
>AF074016-1|AAC26788.1| 1118|Homo sapiens nonsense-mediated mRNA
decay trans-acting factor protein.
Length = 1118
Score = 42.7 bits (96), Expect = 5e-04
Identities = 23/55 (41%), Positives = 32/55 (58%)
Frame = +1
Query: 49 KRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARPSI 213
K+ I++GDH QL PVV K + QSLF R+V LG+ + L Q R P++
Sbjct: 655 KQLILVGDHCQLGPVVMCKKAAK-AGLSQSLFERLVVLGIRPIRLQVQYRMHPAL 708
>AC003972-1|AAB94785.1| 1118|Homo sapiens pNORF1 protein.
Length = 1118
Score = 42.7 bits (96), Expect = 5e-04
Identities = 23/55 (41%), Positives = 32/55 (58%)
Frame = +1
Query: 49 KRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARPSI 213
K+ I++GDH QL PVV K + QSLF R+V LG+ + L Q R P++
Sbjct: 655 KQLILVGDHCQLGPVVMCKKAAK-AGLSQSLFERLVVLGIRPIRLQVQYRMHPAL 708
>D42046-1|BAA07647.1| 1077|Homo sapiens KIAA0083 protein.
Length = 1077
Score = 41.1 bits (92), Expect = 0.002
Identities = 21/58 (36%), Positives = 33/58 (56%)
Frame = +1
Query: 49 KRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARPSICNL 222
+R++++GDH QLPP+V N + M +SLF R+ + V+L Q R I +L
Sbjct: 797 RRFVLVGDHQQLPPLVLNRE-ARALGMSESLFKRLEQNKSAVVQLTVQYRMNSKIMSL 853
>BC053574-1|AAH53574.1| 494|Homo sapiens DNA2L protein protein.
Length = 494
Score = 41.1 bits (92), Expect = 0.002
Identities = 21/58 (36%), Positives = 33/58 (56%)
Frame = +1
Query: 49 KRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARPSICNL 222
+R++++GDH QLPP+V N + M +SLF R+ + V+L Q R I +L
Sbjct: 214 RRFVLVGDHQQLPPLVLNRE-ARALGMSESLFKRLEQNKSAVVQLTVQYRMNSKIMSL 270
>BC041115-1|AAH41115.1| 435|Homo sapiens DNA2L protein protein.
Length = 435
Score = 41.1 bits (92), Expect = 0.002
Identities = 21/58 (36%), Positives = 33/58 (56%)
Frame = +1
Query: 49 KRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARPSICNL 222
+R++++GDH QLPP+V N + M +SLF R+ + V+L Q R I +L
Sbjct: 155 RRFVLVGDHQQLPPLVLNRE-ARALGMSESLFKRLEQNKSAVVQLTVQYRMNSKIMSL 211
>BC028188-1|AAH28188.1| 378|Homo sapiens Unknown (protein for
IMAGE:4385301) protein.
Length = 378
Score = 41.1 bits (92), Expect = 0.002
Identities = 21/58 (36%), Positives = 33/58 (56%)
Frame = +1
Query: 49 KRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARPSICNL 222
+R++++GDH QLPP+V N + M +SLF R+ + V+L Q R I +L
Sbjct: 105 RRFVLVGDHQQLPPLVLNRE-ARALGMSESLFKRLEQNKSAVVQLTVQYRMNSKIMSL 161
>AL136233-5|CAI17238.1| 1040|Homo sapiens DNA2 DNA replication
helicase 2-like (yeast) protein.
Length = 1040
Score = 41.1 bits (92), Expect = 0.002
Identities = 21/58 (36%), Positives = 33/58 (56%)
Frame = +1
Query: 49 KRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARPSICNL 222
+R++++GDH QLPP+V N + M +SLF R+ + V+L Q R I +L
Sbjct: 780 RRFVLVGDHQQLPPLVLNRE-ARALGMSESLFKRLEQNKSAVVQLTVQYRMNSKIMSL 836
>AL136233-4|CAI17237.1| 374|Homo sapiens DNA2 DNA replication
helicase 2-like (yeast) protein.
Length = 374
Score = 41.1 bits (92), Expect = 0.002
Identities = 21/58 (36%), Positives = 33/58 (56%)
Frame = +1
Query: 49 KRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARPSICNL 222
+R++++GDH QLPP+V N + M +SLF R+ + V+L Q R I +L
Sbjct: 101 RRFVLVGDHQQLPPLVLNRE-ARALGMSESLFKRLEQNKSAVVQLTVQYRMNSKIMSL 157
>AK126054-1|BAC86416.1| 926|Homo sapiens protein ( Homo sapiens
cDNA FLJ44066 fis, clone TESTI4036909, weakly similar
to Regulator of nonsense transcripts 1. ).
Length = 926
Score = 37.9 bits (84), Expect = 0.015
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = +1
Query: 37 RSRLKRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARPSI 213
R ++ I++GD QLPP ++ +EQ+LF R+ +G + L Q R P+I
Sbjct: 647 RFECEKLILVGDPKQLPPTIQGSDAAHENGLEQTLFDRLCLMGHKPILLRTQYRCHPAI 705
>BC106017-1|AAI06018.1| 867|Homo sapiens SETX protein protein.
Length = 867
Score = 37.1 bits (82), Expect = 0.026
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 11/69 (15%)
Frame = +1
Query: 43 RLKRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRL-----------GVPYVELDA 189
R + I++GD QLPP V +M Q+Y +QS+ R RL +P ++L
Sbjct: 388 RCNKLILVGDPKQLPPTVISMKAQEY-GYDQSMMARFCRLLEENVEHNMISRLPILQLTV 446
Query: 190 QGRARPSIC 216
Q R P IC
Sbjct: 447 QYRMHPDIC 455
>BC078166-1|AAH78166.1| 917|Homo sapiens SETX protein protein.
Length = 917
Score = 37.1 bits (82), Expect = 0.026
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 11/69 (15%)
Frame = +1
Query: 43 RLKRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRL-----------GVPYVELDA 189
R + I++GD QLPP V +M Q+Y +QS+ R RL +P ++L
Sbjct: 438 RCNKLILVGDPKQLPPTVISMKAQEY-GYDQSMMARFCRLLEENVEHNMISRLPILQLTV 496
Query: 190 QGRARPSIC 216
Q R P IC
Sbjct: 497 QYRMHPDIC 505
>BC032622-1|AAH32622.2| 1030|Homo sapiens SETX protein protein.
Length = 1030
Score = 37.1 bits (82), Expect = 0.026
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 11/69 (15%)
Frame = +1
Query: 43 RLKRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRL-----------GVPYVELDA 189
R + I++GD QLPP V +M Q+Y +QS+ R RL +P ++L
Sbjct: 551 RCNKLILVGDPKQLPPTVISMKAQEY-GYDQSMMARFCRLLEENVEHNMISRLPILQLTV 609
Query: 190 QGRARPSIC 216
Q R P IC
Sbjct: 610 QYRMHPDIC 618
>BC032600-1|AAH32600.1| 828|Homo sapiens SETX protein protein.
Length = 828
Score = 37.1 bits (82), Expect = 0.026
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 11/69 (15%)
Frame = +1
Query: 43 RLKRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRL-----------GVPYVELDA 189
R + I++GD QLPP V +M Q+Y +QS+ R RL +P ++L
Sbjct: 349 RCNKLILVGDPKQLPPTVISMKAQEY-GYDQSMMARFCRLLEENVEHNMISRLPILQLTV 407
Query: 190 QGRARPSIC 216
Q R P IC
Sbjct: 408 QYRMHPDIC 416
>AY362728-1|AAR13367.1| 2677|Homo sapiens ataxia/oculomotor apraxia
protein 2 protein.
Length = 2677
Score = 37.1 bits (82), Expect = 0.026
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 11/69 (15%)
Frame = +1
Query: 43 RLKRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRL-----------GVPYVELDA 189
R + I++GD QLPP V +M Q+Y +QS+ R RL +P ++L
Sbjct: 2198 RCNKLILVGDPKQLPPTVISMKAQEY-GYDQSMMARFCRLLEENVEHNMISRLPILQLTV 2256
Query: 190 QGRARPSIC 216
Q R P IC
Sbjct: 2257 QYRMHPDIC 2265
>AL353701-2|CAM14151.1| 2677|Homo sapiens senataxin protein.
Length = 2677
Score = 37.1 bits (82), Expect = 0.026
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 11/69 (15%)
Frame = +1
Query: 43 RLKRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRL-----------GVPYVELDA 189
R + I++GD QLPP V +M Q+Y +QS+ R RL +P ++L
Sbjct: 2198 RCNKLILVGDPKQLPPTVISMKAQEY-GYDQSMMARFCRLLEENVEHNMISRLPILQLTV 2256
Query: 190 QGRARPSIC 216
Q R P IC
Sbjct: 2257 QYRMHPDIC 2265
>AL159997-5|CAI40857.1| 948|Homo sapiens senataxin protein.
Length = 948
Score = 37.1 bits (82), Expect = 0.026
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 11/69 (15%)
Frame = +1
Query: 43 RLKRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRL-----------GVPYVELDA 189
R + I++GD QLPP V +M Q+Y +QS+ R RL +P ++L
Sbjct: 440 RCNKLILVGDPKQLPPTVISMKAQEY-GYDQSMMARFCRLLEENVEHNMISRLPILQLTV 498
Query: 190 QGRARPSIC 216
Q R P IC
Sbjct: 499 QYRMHPDIC 507
>AL159997-2|CAI40854.1| 2677|Homo sapiens senataxin protein.
Length = 2677
Score = 37.1 bits (82), Expect = 0.026
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 11/69 (15%)
Frame = +1
Query: 43 RLKRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRL-----------GVPYVELDA 189
R + I++GD QLPP V +M Q+Y +QS+ R RL +P ++L
Sbjct: 2198 RCNKLILVGDPKQLPPTVISMKAQEY-GYDQSMMARFCRLLEENVEHNMISRLPILQLTV 2256
Query: 190 QGRARPSIC 216
Q R P IC
Sbjct: 2257 QYRMHPDIC 2265
>AK001456-1|BAA91701.1| 828|Homo sapiens protein ( Homo sapiens
cDNA FLJ10594 fis, clone NT2RP2004689. ).
Length = 828
Score = 37.1 bits (82), Expect = 0.026
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 11/69 (15%)
Frame = +1
Query: 43 RLKRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRL-----------GVPYVELDA 189
R + I++GD QLPP V +M Q+Y +QS+ R RL +P ++L
Sbjct: 349 RCNKLILVGDPKQLPPTVISMKAQEY-GYDQSMMARFCRLLEENVEHNMISRLPILQLTV 407
Query: 190 QGRARPSIC 216
Q R P IC
Sbjct: 408 QYRMHPDIC 416
>AB014525-1|BAA31600.2| 2663|Homo sapiens KIAA0625 protein protein.
Length = 2663
Score = 37.1 bits (82), Expect = 0.026
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 11/69 (15%)
Frame = +1
Query: 43 RLKRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRL-----------GVPYVELDA 189
R + I++GD QLPP V +M Q+Y +QS+ R RL +P ++L
Sbjct: 2184 RCNKLILVGDPKQLPPTVISMKAQEY-GYDQSMMARFCRLLEENVEHNMISRLPILQLTV 2242
Query: 190 QGRARPSIC 216
Q R P IC
Sbjct: 2243 QYRMHPDIC 2251
>BC150283-1|AAI50284.1| 2080|Homo sapiens peroxisomal
proliferator-activated receptor A interacting complex 285
protein.
Length = 2080
Score = 33.5 bits (73), Expect = 0.32
Identities = 21/53 (39%), Positives = 27/53 (50%)
Frame = +1
Query: 58 IMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARPSIC 216
+++GDH QL PVVKN Q +++SLF R LD Q R IC
Sbjct: 1815 VLLGDHKQLRPVVKNERLQN-LGLDRSLFERYHE---DAHMLDTQYRMHEGIC 1863
>AL121829-16|CAI95749.1| 2080|Homo sapiens RP4-697K14.7 protein.
Length = 2080
Score = 33.5 bits (73), Expect = 0.32
Identities = 21/53 (39%), Positives = 27/53 (50%)
Frame = +1
Query: 58 IMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARPSIC 216
+++GDH QL PVVKN Q +++SLF R LD Q R IC
Sbjct: 1815 VLLGDHKQLRPVVKNERLQN-LGLDRSLFERYHE---DAHMLDTQYRMHEGIC 1863
>AK074171-1|BAB84997.1| 1124|Homo sapiens FLJ00244 protein protein.
Length = 1124
Score = 33.5 bits (73), Expect = 0.32
Identities = 21/53 (39%), Positives = 27/53 (50%)
Frame = +1
Query: 58 IMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARPSIC 216
+++GDH QL PVVKN Q +++SLF R LD Q R IC
Sbjct: 859 VLLGDHKQLRPVVKNERLQN-LGLDRSLFERYHE---DAHMLDTQYRMHEGIC 907
>AK055611-1|BAB70969.1| 413|Homo sapiens protein ( Homo sapiens
cDNA FLJ31049 fis, clone HSYRA2000510, weakly similar to
NAM7 PROTEIN. ).
Length = 413
Score = 33.5 bits (73), Expect = 0.32
Identities = 21/53 (39%), Positives = 27/53 (50%)
Frame = +1
Query: 58 IMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARPSIC 216
+++GDH QL PVVKN Q +++SLF R LD Q R IC
Sbjct: 148 VLLGDHKQLRPVVKNERLQN-LGLDRSLFERYHE---DAHMLDTQYRMHEGIC 196
>AF517673-1|AAM74197.1| 2080|Homo sapiens peroxisomal
proliferator-activated receptor A interacting complex-285
peptide protein.
Length = 2080
Score = 33.5 bits (73), Expect = 0.32
Identities = 21/53 (39%), Positives = 27/53 (50%)
Frame = +1
Query: 58 IMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARPSIC 216
+++GDH QL PVVKN Q +++SLF R LD Q R IC
Sbjct: 1815 VLLGDHKQLRPVVKNERLQN-LGLDRSLFERYHE---DAHMLDTQYRMHEGIC 1863
>AB201715-1|BAE46995.1| 2649|Homo sapiens PPAR gamma DBD-interacting
protein1 beta protein.
Length = 2649
Score = 33.5 bits (73), Expect = 0.32
Identities = 21/53 (39%), Positives = 27/53 (50%)
Frame = +1
Query: 58 IMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARPSIC 216
+++GDH QL PVVKN Q +++SLF R LD Q R IC
Sbjct: 2384 VLLGDHKQLRPVVKNERLQN-LGLDRSLFERYHE---DAHMLDTQYRMHEGIC 2432
>AB051556-1|BAB21860.2| 2114|Homo sapiens KIAA1769 protein protein.
Length = 2114
Score = 33.5 bits (73), Expect = 0.32
Identities = 21/53 (39%), Positives = 27/53 (50%)
Frame = +1
Query: 58 IMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARPSIC 216
+++GDH QL PVVKN Q +++SLF R LD Q R IC
Sbjct: 1849 VLLGDHKQLRPVVKNERLQN-LGLDRSLFERYHE---DAHMLDTQYRMHEGIC 1897
>AF399572-1|AAK95057.1| 214|Homo sapiens olfactory receptor
protein.
Length = 214
Score = 31.9 bits (69), Expect = 0.96
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -3
Query: 344 PLKSSTLMSWKSCRRPALAAWYSG 273
PL TLMSW++C R LA+W G
Sbjct: 62 PLHYMTLMSWQTCIRLVLASWVVG 85
>AB065880-1|BAC06098.1| 310|Homo sapiens seven transmembrane helix
receptor protein.
Length = 310
Score = 31.9 bits (69), Expect = 0.96
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -3
Query: 344 PLKSSTLMSWKSCRRPALAAWYSG 273
PL TLMSW++C R LA+W G
Sbjct: 130 PLHYMTLMSWQTCIRLVLASWVVG 153
>AL450303-4|CAH71665.1| 320|Homo sapiens olfactory receptor, family
2, subfamily T, member1-like 1 protein.
Length = 320
Score = 30.7 bits (66), Expect = 2.2
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -3
Query: 344 PLKSSTLMSWKSCRRPALAAWYSG 273
PL+ TLMSW+ C R +++W G
Sbjct: 127 PLRYPTLMSWQLCLRMTMSSWLLG 150
>AB065960-1|BAC06172.1| 320|Homo sapiens seven transmembrane helix
receptor protein.
Length = 320
Score = 30.7 bits (66), Expect = 2.2
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -3
Query: 344 PLKSSTLMSWKSCRRPALAAWYSG 273
PL+ TLMSW+ C R +++W G
Sbjct: 127 PLRYPTLMSWQLCLRMTMSSWLLG 150
>AL450303-3|CAH71664.1| 320|Homo sapiens olfactory receptor, family
2, subfamily T, member01, MAP2K4) pseudogene protein.
Length = 320
Score = 30.3 bits (65), Expect = 2.9
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 344 PLKSSTLMSWKSCRRPALAAWYSG 273
PL+ TLMSW+ C R ++ W G
Sbjct: 127 PLRYPTLMSWQLCLRMTMSCWLLG 150
>AB065961-1|BAC06173.1| 320|Homo sapiens seven transmembrane helix
receptor protein.
Length = 320
Score = 30.3 bits (65), Expect = 2.9
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 344 PLKSSTLMSWKSCRRPALAAWYSG 273
PL+ TLMSW+ C R ++ W G
Sbjct: 127 PLRYPTLMSWQLCLRMTMSCWLLG 150
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,096,680
Number of Sequences: 237096
Number of extensions: 1497258
Number of successful extensions: 7292
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 7176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7276
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3430805640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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