Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_M07
         (411 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal prot...   132   4e-33
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         26   0.62 
X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein...    24   1.9  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            22   7.6  
AJ439353-9|CAD27931.1|  391|Anopheles gambiae transcription fact...    22   7.6  

>AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal protein
           rpL7a protein.
          Length = 271

 Score =  132 bits (320), Expect = 4e-33
 Identities = 57/81 (70%), Positives = 70/81 (86%)
 Frame = +3

Query: 165 RTIVNPLFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFT 344
           + +VNPLFEKR KN+ IGQ++QP RDLSRFV+WPKYIRIQR +A+LQ+RLK+PPPINQFT
Sbjct: 31  KKVVNPLFEKRVKNYGIGQNVQPKRDLSRFVKWPKYIRIQRHRAILQKRLKIPPPINQFT 90

Query: 345 QTLDKTTAKGLFKILEKYWPE 407
           QTLDK TA+ + K  +KY PE
Sbjct: 91  QTLDKPTAQQVMKCWKKYRPE 111


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 25.8 bits (54), Expect = 0.62
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +2

Query: 272 YSHPASKGCVTASSQSAAANQPVHP 346
           + HP   G + A SQ     QPVHP
Sbjct: 165 HHHPGLTGLMQAPSQQQQHLQPVHP 189


>X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein
           Agm1 protein.
          Length = 498

 Score = 24.2 bits (50), Expect = 1.9
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -3

Query: 406 SGQYFSKILNRPLAVVLSNVWVNWLIGGGTLRR 308
           +GQ F   + R L VV  N + NW++G    +R
Sbjct: 331 TGQQFYDNIKRWLDVVPENRFSNWVLGNHDNKR 363


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 22.2 bits (45), Expect = 7.6
 Identities = 13/43 (30%), Positives = 18/43 (41%)
 Frame = +3

Query: 171 IVNPLFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAV 299
           +V PL   R + +    +  PTR L  F RW   +   R   V
Sbjct: 448 VVAPLLASRLREWKPFSE--PTRHLDIFKRWKSILASSRTDTV 488


>AJ439353-9|CAD27931.1|  391|Anopheles gambiae transcription factor
           protein.
          Length = 391

 Score = 22.2 bits (45), Expect = 7.6
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = +3

Query: 240 DLSRFVRWPKYIRIQRQKAVLQRRLKVPPP 329
           D++R++ W K I+  R  A+  ++L+ P P
Sbjct: 343 DVARWLEWRKKIKEYRMTAM--KKLQPPKP 370


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 413,650
Number of Sequences: 2352
Number of extensions: 6807
Number of successful extensions: 18
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 33349914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)