Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_M05
         (96 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY084165-1|AAL89903.1|  525|Drosophila melanogaster RE39081p pro...    33   0.040
AE014296-1347|AAF50503.1|  525|Drosophila melanogaster CG8254-PA...    33   0.040
AY069410-1|AAL39555.1|  388|Drosophila melanogaster LD10857p pro...    26   8.1  
AE014298-2207|AAF48505.3|  388|Drosophila melanogaster CG8239-PA...    26   8.1  

>AY084165-1|AAL89903.1|  525|Drosophila melanogaster RE39081p
           protein.
          Length = 525

 Score = 33.5 bits (73), Expect = 0.040
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +1

Query: 4   RGALGPRDERTPQAPAANPTHGAEVAAQP 90
           +  L PR + TP  PAA+PTH A     P
Sbjct: 61  QSTLSPRSQITPSPPAASPTHSAATTGSP 89


>AE014296-1347|AAF50503.1|  525|Drosophila melanogaster CG8254-PA
           protein.
          Length = 525

 Score = 33.5 bits (73), Expect = 0.040
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +1

Query: 4   RGALGPRDERTPQAPAANPTHGAEVAAQP 90
           +  L PR + TP  PAA+PTH A     P
Sbjct: 61  QSTLSPRSQITPSPPAASPTHSAATTGSP 89


>AY069410-1|AAL39555.1|  388|Drosophila melanogaster LD10857p
           protein.
          Length = 388

 Score = 25.8 bits (54), Expect = 8.1
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -1

Query: 60  GVSCRSLRGAFVTWTQSA 7
           G +CRSL G FV W + A
Sbjct: 148 GSACRSLYGGFVQWHRGA 165


>AE014298-2207|AAF48505.3|  388|Drosophila melanogaster CG8239-PA
           protein.
          Length = 388

 Score = 25.8 bits (54), Expect = 8.1
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -1

Query: 60  GVSCRSLRGAFVTWTQSA 7
           G +CRSL G FV W + A
Sbjct: 148 GSACRSLYGGFVQWHRGA 165


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.309    0.125    0.370 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,973,428
Number of Sequences: 53049
Number of extensions: 50126
Number of successful extensions: 184
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 184
length of database: 24,988,368
effective HSP length: 13
effective length of database: 24,298,731
effective search space used: 437377158
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)