Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_M05
(96 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 21 1.8
AY078401-1|AAL83704.1| 27|Apis mellifera major royal jelly pro... 21 1.8
U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 19 4.1
AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 19 4.1
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 19 5.4
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 19 7.1
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 19 7.1
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 18 9.4
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 18 9.4
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 18 9.4
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 18 9.4
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 18 9.4
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 18 9.4
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 18 9.4
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 18 9.4
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 18 9.4
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 20.6 bits (41), Expect = 1.8
Identities = 8/18 (44%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
Frame = -1
Query: 75 LCSVC-GVSCRSLRGAFV 25
L VC G++C+++RG V
Sbjct: 6 LLMVCLGIACQNIRGGVV 23
>AY078401-1|AAL83704.1| 27|Apis mellifera major royal jelly
protein MRJP4 protein.
Length = 27
Score = 20.6 bits (41), Expect = 1.8
Identities = 8/18 (44%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
Frame = -1
Query: 75 LCSVC-GVSCRSLRGAFV 25
L VC G++C+++RG V
Sbjct: 6 LLMVCLGIACQNIRGGVV 23
>U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive
opsin protein.
Length = 377
Score = 19.4 bits (38), Expect = 4.1
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = -3
Query: 76 PLLRVWG 56
PLL+VWG
Sbjct: 189 PLLKVWG 195
>AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin
protein.
Length = 377
Score = 19.4 bits (38), Expect = 4.1
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = -3
Query: 76 PLLRVWG 56
PLL+VWG
Sbjct: 189 PLLKVWG 195
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 19.0 bits (37), Expect = 5.4
Identities = 6/15 (40%), Positives = 10/15 (66%)
Frame = +2
Query: 14 WVHVTNAPRKLLQLT 58
+VH P KLL+++
Sbjct: 131 YVHTITVPNKLLRIS 145
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 18.6 bits (36), Expect = 7.1
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = -1
Query: 84 SGDLCSVCG 58
S LCS+CG
Sbjct: 106 SKHLCSICG 114
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 18.6 bits (36), Expect = 7.1
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = -1
Query: 84 SGDLCSVCG 58
S LCS+CG
Sbjct: 106 SKHLCSICG 114
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 18.2 bits (35), Expect = 9.4
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = -1
Query: 72 CSVCGVSCRSLRGAFVTWTQSASC 1
C +S SLR ++ +++SC
Sbjct: 207 CKKYAISSNSLRSRSRSFQRTSSC 230
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 18.2 bits (35), Expect = 9.4
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = -1
Query: 72 CSVCGVSCRSLRGAFVTWTQSASC 1
C +S SLR ++ +++SC
Sbjct: 207 CKKYAISSNSLRSRSRSFQRTSSC 230
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 18.2 bits (35), Expect = 9.4
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = -1
Query: 72 CSVCGVSCRSLRGAFVTWTQSASC 1
C +S SLR ++ +++SC
Sbjct: 207 CKKYAISSNSLRSRSRSFQRTSSC 230
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 18.2 bits (35), Expect = 9.4
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = -1
Query: 72 CSVCGVSCRSLRGAFVTWTQSASC 1
C +S SLR ++ +++SC
Sbjct: 207 CKKYAISSNSLRSRSRSFQRTSSC 230
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 18.2 bits (35), Expect = 9.4
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = -1
Query: 72 CSVCGVSCRSLRGAFVTWTQSASC 1
C +S SLR ++ +++SC
Sbjct: 207 CKKYAISSNSLRSRSRSFQRTSSC 230
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 18.2 bits (35), Expect = 9.4
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = -1
Query: 72 CSVCGVSCRSLRGAFVTWTQSASC 1
C +S SLR ++ +++SC
Sbjct: 207 CKKYAISSNSLRSRSRSFQRTSSC 230
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 18.2 bits (35), Expect = 9.4
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = +2
Query: 44 LLQLTPHTEQRSP 82
+ LTP T +R+P
Sbjct: 267 MASLTPDTNRRNP 279
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 18.2 bits (35), Expect = 9.4
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = -1
Query: 72 CSVCGVSCRSLRGAFVTWTQSASC 1
C +S SLR ++ +++SC
Sbjct: 207 CKKYAISSNSLRSRSRSFQRTSSC 230
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 18.2 bits (35), Expect = 9.4
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = +2
Query: 44 LLQLTPHTEQRSP 82
+ LTP T +R+P
Sbjct: 357 MASLTPDTNRRNP 369
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.309 0.125 0.370
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,734
Number of Sequences: 438
Number of extensions: 263
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 13
effective length of database: 140,649
effective search space used: 2531682
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.6 bits)
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