Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_M04
(560 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein. 126 7e-31
AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein. 126 7e-31
AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein. 126 7e-31
AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein. 126 7e-31
EF426175-1|ABO26418.1| 155|Anopheles gambiae unknown protein. 25 1.7
DQ004399-1|AAY21238.1| 847|Anopheles gambiae lysozyme c-6 protein. 24 3.9
AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein. 23 5.2
AY344829-1|AAR05800.1| 334|Anopheles gambiae ICHIT protein. 23 5.2
AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein. 23 9.0
>AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 126 bits (303), Expect = 7e-31
Identities = 55/135 (40%), Positives = 86/135 (63%)
Frame = +1
Query: 4 RGDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL 183
R +Y + +++ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YDIC R L
Sbjct: 52 REEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTL 111
Query: 184 DIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVIS 363
+ P+Y +LN L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP+ S
Sbjct: 112 KVPNPSYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTS 171
Query: 364 AEKAYHEQLSVAEIT 408
+ L+V E+T
Sbjct: 172 RGSQQYRALTVPELT 186
>AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 126 bits (303), Expect = 7e-31
Identities = 55/135 (40%), Positives = 86/135 (63%)
Frame = +1
Query: 4 RGDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL 183
R +Y + +++ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YDIC R L
Sbjct: 52 REEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTL 111
Query: 184 DIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVIS 363
+ P+Y +LN L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP+ S
Sbjct: 112 KVPNPSYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTS 171
Query: 364 AEKAYHEQLSVAEIT 408
+ L+V E+T
Sbjct: 172 RGSQQYRALTVPELT 186
>AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 126 bits (303), Expect = 7e-31
Identities = 55/135 (40%), Positives = 86/135 (63%)
Frame = +1
Query: 4 RGDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL 183
R +Y + +++ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YDIC R L
Sbjct: 52 REEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTL 111
Query: 184 DIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVIS 363
+ P+Y +LN L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP+ S
Sbjct: 112 KVPNPSYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTS 171
Query: 364 AEKAYHEQLSVAEIT 408
+ L+V E+T
Sbjct: 172 RGSQQYRALTVPELT 186
>AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 126 bits (303), Expect = 7e-31
Identities = 55/135 (40%), Positives = 86/135 (63%)
Frame = +1
Query: 4 RGDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL 183
R +Y + +++ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YDIC R L
Sbjct: 52 REEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTL 111
Query: 184 DIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVIS 363
+ P+Y +LN L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP+ S
Sbjct: 112 KVPNPSYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTS 171
Query: 364 AEKAYHEQLSVAEIT 408
+ L+V E+T
Sbjct: 172 RGSQQYRALTVPELT 186
>EF426175-1|ABO26418.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 25.0 bits (52), Expect = 1.7
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +2
Query: 137 SWSTMKPSMTSAAVTWILNARPTPTSIVLSARSYHRLPPLCVS 265
SWS + S S T S+ L A S +L P CVS
Sbjct: 37 SWSDCQASAQSVECTSASQMSIXGHSLFLPAESRQQLEPACVS 79
>DQ004399-1|AAY21238.1| 847|Anopheles gambiae lysozyme c-6 protein.
Length = 847
Score = 23.8 bits (49), Expect = 3.9
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +3
Query: 201 LHQPQSSYRPDRIIDYRLSAFRRRP 275
+++P R DR+ ++ L+ F RRP
Sbjct: 765 VYRPYCKGRADRLYEFYLNNFGRRP 789
>AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 23.4 bits (48), Expect = 5.2
Identities = 11/40 (27%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +2
Query: 137 SWSTMKPSM-TSAAVTWILNARPTPTSIVLSARSYHRLPP 253
+WS + P T+ WI T T + + ++ LPP
Sbjct: 205 TWSDLPPPPPTTTTTVWIDPTATTTTHVPTTTTTWSDLPP 244
>AY344829-1|AAR05800.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 23.4 bits (48), Expect = 5.2
Identities = 11/40 (27%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +2
Query: 137 SWSTMKPSM-TSAAVTWILNARPTPTSIVLSARSYHRLPP 253
+WS + P T+ WI T T + + ++ LPP
Sbjct: 206 TWSDLPPPPPTTTTTVWIDPTATTTTHVPTTTTTWSDLPP 245
>AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 22.6 bits (46), Expect = 9.0
Identities = 11/40 (27%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +2
Query: 137 SWSTMKPSM-TSAAVTWILNARPTPTSIVLSARSYHRLPP 253
+WS + P T+ WI T T + + ++ LPP
Sbjct: 206 TWSDLPPPPPTTTTTVWIDPTATTTTHVPPTTTTWSDLPP 245
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 613,209
Number of Sequences: 2352
Number of extensions: 13640
Number of successful extensions: 74
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 74
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52563375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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