Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_M03
         (484 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X57959-1|CAA41027.1|  248|Homo sapiens ribosomal protein L7 prot...    53   5e-07
X57958-1|CAA41026.1|  253|Homo sapiens ribosomal protein L7 prot...    53   5e-07
X52967-1|CAA37139.1|  248|Homo sapiens ribosomal protein L7 prot...    53   5e-07
L16558-1|AAA03081.1|  248|Homo sapiens ribosomal protein L7 prot...    53   5e-07
CR456773-1|CAG33054.1|  248|Homo sapiens RPL7 protein.                 53   5e-07
BC106056-1|AAI06057.1|  318|Homo sapiens RPL7 protein protein.         53   5e-07
BC087837-1|AAH87837.1|  248|Homo sapiens ribosomal protein L7 pr...    53   5e-07
BC071895-1|AAH71895.1|  248|Homo sapiens ribosomal protein L7 pr...    53   5e-07
BC071894-1|AAH71894.1|  248|Homo sapiens ribosomal protein L7 pr...    53   5e-07
BC071671-1|AAH71671.1|  248|Homo sapiens ribosomal protein L7 pr...    53   5e-07
BC009599-1|AAH09599.1|  248|Homo sapiens ribosomal protein L7 pr...    53   5e-07
BC008850-1|AAH08850.1|  248|Homo sapiens ribosomal protein L7 pr...    53   5e-07
BC006095-1|AAH06095.1|  248|Homo sapiens ribosomal protein L7 pr...    53   5e-07
AC005058-2|AAD08846.1|  247|Homo sapiens WUGSC:H_RG054D04.1 prot...    52   8e-07
BC112226-1|AAI12227.2|  637|Homo sapiens R3H domain containing 2...    30   4.9  
BC104995-1|AAI04996.2|  637|Homo sapiens R3H domain containing 2...    30   4.9  
BC041857-1|AAH41857.1|  681|Homo sapiens R3HDM2 protein protein.       30   4.9  
AB023219-1|BAA76846.2|  962|Homo sapiens KIAA1002 protein protein.     30   4.9  

>X57959-1|CAA41027.1|  248|Homo sapiens ribosomal protein L7
           protein.
          Length = 248

 Score = 53.2 bits (122), Expect = 5e-07
 Identities = 29/68 (42%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
 Frame = +3

Query: 285 SELAVFRSHSRGVPLPLRRGTKSL--REPNNMSKQYRIKERDEIRLARQARNRGNYYVPG 458
           +EL + R   +     LR+  + L   +  +  K+YR   R EIR+AR AR  GN+YVP 
Sbjct: 26  AELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKEYRQMYRTEIRMARMARKAGNFYVPA 85

Query: 459 EAKLAFVI 482
           E KLAFVI
Sbjct: 86  EPKLAFVI 93


>X57958-1|CAA41026.1|  253|Homo sapiens ribosomal protein L7
           protein.
          Length = 253

 Score = 53.2 bits (122), Expect = 5e-07
 Identities = 29/68 (42%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
 Frame = +3

Query: 285 SELAVFRSHSRGVPLPLRRGTKSL--REPNNMSKQYRIKERDEIRLARQARNRGNYYVPG 458
           +EL + R   +     LR+  + L   +  +  K+YR   R EIR+AR AR  GN+YVP 
Sbjct: 31  AELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKEYRQMYRTEIRMARMARKAGNFYVPA 90

Query: 459 EAKLAFVI 482
           E KLAFVI
Sbjct: 91  EPKLAFVI 98


>X52967-1|CAA37139.1|  248|Homo sapiens ribosomal protein L7
           protein.
          Length = 248

 Score = 53.2 bits (122), Expect = 5e-07
 Identities = 29/68 (42%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
 Frame = +3

Query: 285 SELAVFRSHSRGVPLPLRRGTKSL--REPNNMSKQYRIKERDEIRLARQARNRGNYYVPG 458
           +EL + R   +     LR+  + L   +  +  K+YR   R EIR+AR AR  GN+YVP 
Sbjct: 26  AELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKEYRQMYRTEIRMARMARKAGNFYVPA 85

Query: 459 EAKLAFVI 482
           E KLAFVI
Sbjct: 86  EPKLAFVI 93


>L16558-1|AAA03081.1|  248|Homo sapiens ribosomal protein L7
           protein.
          Length = 248

 Score = 53.2 bits (122), Expect = 5e-07
 Identities = 29/68 (42%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
 Frame = +3

Query: 285 SELAVFRSHSRGVPLPLRRGTKSL--REPNNMSKQYRIKERDEIRLARQARNRGNYYVPG 458
           +EL + R   +     LR+  + L   +  +  K+YR   R EIR+AR AR  GN+YVP 
Sbjct: 26  AELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKEYRQMYRTEIRMARMARKAGNFYVPA 85

Query: 459 EAKLAFVI 482
           E KLAFVI
Sbjct: 86  EPKLAFVI 93


>CR456773-1|CAG33054.1|  248|Homo sapiens RPL7 protein.
          Length = 248

 Score = 53.2 bits (122), Expect = 5e-07
 Identities = 29/68 (42%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
 Frame = +3

Query: 285 SELAVFRSHSRGVPLPLRRGTKSL--REPNNMSKQYRIKERDEIRLARQARNRGNYYVPG 458
           +EL + R   +     LR+  + L   +  +  K+YR   R EIR+AR AR  GN+YVP 
Sbjct: 26  AELKIKRLRKKFAQKMLRKARRELIYEKAKHYHKEYRQMYRTEIRMARMARKAGNFYVPA 85

Query: 459 EAKLAFVI 482
           E KLAFVI
Sbjct: 86  EPKLAFVI 93


>BC106056-1|AAI06057.1|  318|Homo sapiens RPL7 protein protein.
          Length = 318

 Score = 53.2 bits (122), Expect = 5e-07
 Identities = 29/68 (42%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
 Frame = +3

Query: 285 SELAVFRSHSRGVPLPLRRGTKSL--REPNNMSKQYRIKERDEIRLARQARNRGNYYVPG 458
           +EL + R   +     LR+  + L   +  +  K+YR   R EIR+AR AR  GN+YVP 
Sbjct: 96  AELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKEYRQMYRTEIRMARMARKAGNFYVPA 155

Query: 459 EAKLAFVI 482
           E KLAFVI
Sbjct: 156 EPKLAFVI 163


>BC087837-1|AAH87837.1|  248|Homo sapiens ribosomal protein L7
           protein.
          Length = 248

 Score = 53.2 bits (122), Expect = 5e-07
 Identities = 29/68 (42%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
 Frame = +3

Query: 285 SELAVFRSHSRGVPLPLRRGTKSL--REPNNMSKQYRIKERDEIRLARQARNRGNYYVPG 458
           +EL + R   +     LR+  + L   +  +  K+YR   R EIR+AR AR  GN+YVP 
Sbjct: 26  AELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKEYRQMYRTEIRMARMARKAGNFYVPA 85

Query: 459 EAKLAFVI 482
           E KLAFVI
Sbjct: 86  EPKLAFVI 93


>BC071895-1|AAH71895.1|  248|Homo sapiens ribosomal protein L7
           protein.
          Length = 248

 Score = 53.2 bits (122), Expect = 5e-07
 Identities = 29/68 (42%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
 Frame = +3

Query: 285 SELAVFRSHSRGVPLPLRRGTKSL--REPNNMSKQYRIKERDEIRLARQARNRGNYYVPG 458
           +EL + R   +     LR+  + L   +  +  K+YR   R EIR+AR AR  GN+YVP 
Sbjct: 26  AELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKEYRQMYRTEIRMARMARKAGNFYVPA 85

Query: 459 EAKLAFVI 482
           E KLAFVI
Sbjct: 86  EPKLAFVI 93


>BC071894-1|AAH71894.1|  248|Homo sapiens ribosomal protein L7
           protein.
          Length = 248

 Score = 53.2 bits (122), Expect = 5e-07
 Identities = 29/68 (42%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
 Frame = +3

Query: 285 SELAVFRSHSRGVPLPLRRGTKSL--REPNNMSKQYRIKERDEIRLARQARNRGNYYVPG 458
           +EL + R   +     LR+  + L   +  +  K+YR   R EIR+AR AR  GN+YVP 
Sbjct: 26  AELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKEYRQMYRTEIRMARMARKAGNFYVPA 85

Query: 459 EAKLAFVI 482
           E KLAFVI
Sbjct: 86  EPKLAFVI 93


>BC071671-1|AAH71671.1|  248|Homo sapiens ribosomal protein L7
           protein.
          Length = 248

 Score = 53.2 bits (122), Expect = 5e-07
 Identities = 29/68 (42%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
 Frame = +3

Query: 285 SELAVFRSHSRGVPLPLRRGTKSL--REPNNMSKQYRIKERDEIRLARQARNRGNYYVPG 458
           +EL + R   +     LR+  + L   +  +  K+YR   R EIR+AR AR  GN+YVP 
Sbjct: 26  AELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKEYRQMYRTEIRMARMARKAGNFYVPA 85

Query: 459 EAKLAFVI 482
           E KLAFVI
Sbjct: 86  EPKLAFVI 93


>BC009599-1|AAH09599.1|  248|Homo sapiens ribosomal protein L7
           protein.
          Length = 248

 Score = 53.2 bits (122), Expect = 5e-07
 Identities = 29/68 (42%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
 Frame = +3

Query: 285 SELAVFRSHSRGVPLPLRRGTKSL--REPNNMSKQYRIKERDEIRLARQARNRGNYYVPG 458
           +EL + R   +     LR+  + L   +  +  K+YR   R EIR+AR AR  GN+YVP 
Sbjct: 26  AELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKEYRQMYRTEIRMARMARKAGNFYVPA 85

Query: 459 EAKLAFVI 482
           E KLAFVI
Sbjct: 86  EPKLAFVI 93


>BC008850-1|AAH08850.1|  248|Homo sapiens ribosomal protein L7
           protein.
          Length = 248

 Score = 53.2 bits (122), Expect = 5e-07
 Identities = 29/68 (42%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
 Frame = +3

Query: 285 SELAVFRSHSRGVPLPLRRGTKSL--REPNNMSKQYRIKERDEIRLARQARNRGNYYVPG 458
           +EL + R   +     LR+  + L   +  +  K+YR   R EIR+AR AR  GN+YVP 
Sbjct: 26  AELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKEYRQMYRTEIRMARMARKAGNFYVPA 85

Query: 459 EAKLAFVI 482
           E KLAFVI
Sbjct: 86  EPKLAFVI 93


>BC006095-1|AAH06095.1|  248|Homo sapiens ribosomal protein L7
           protein.
          Length = 248

 Score = 53.2 bits (122), Expect = 5e-07
 Identities = 29/68 (42%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
 Frame = +3

Query: 285 SELAVFRSHSRGVPLPLRRGTKSL--REPNNMSKQYRIKERDEIRLARQARNRGNYYVPG 458
           +EL + R   +     LR+  + L   +  +  K+YR   R EIR+AR AR  GN+YVP 
Sbjct: 26  AELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKEYRQMYRTEIRMARMARKAGNFYVPA 85

Query: 459 EAKLAFVI 482
           E KLAFVI
Sbjct: 86  EPKLAFVI 93


>AC005058-2|AAD08846.1|  247|Homo sapiens WUGSC:H_RG054D04.1
           protein.
          Length = 247

 Score = 52.4 bits (120), Expect = 8e-07
 Identities = 29/68 (42%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
 Frame = +3

Query: 285 SELAVFRSHSRGVPLPLRRGTKSL--REPNNMSKQYRIKERDEIRLARQARNRGNYYVPG 458
           SEL + R   +     LR+  + L   +  +  ++YR   R EIR+AR AR  GNY+VP 
Sbjct: 25  SELKMKRLRKKFAQKMLRKARRKLIYEKAKHYHREYRQMYRTEIRMARMARKAGNYFVPA 84

Query: 459 EAKLAFVI 482
           E KLAFVI
Sbjct: 85  EPKLAFVI 92


>BC112226-1|AAI12227.2|  637|Homo sapiens R3H domain containing 2
           protein.
          Length = 637

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
 Frame = +3

Query: 264 TVKGGRHSELAVFRSHSRGVPLPLRRGTKSLREPNNMS--KQYRIKERDEIRLARQARNR 437
           T + GRHS+LA   +     P PL     SLR  N++S  K    K+  ++R+  +A ++
Sbjct: 578 TAENGRHSDLAALYTIVAVFPSPLAAQNASLRLNNSVSRFKLRMAKKNYDLRILERASSQ 637


>BC104995-1|AAI04996.2|  637|Homo sapiens R3H domain containing 2
           protein.
          Length = 637

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
 Frame = +3

Query: 264 TVKGGRHSELAVFRSHSRGVPLPLRRGTKSLREPNNMS--KQYRIKERDEIRLARQARNR 437
           T + GRHS+LA   +     P PL     SLR  N++S  K    K+  ++R+  +A ++
Sbjct: 578 TAENGRHSDLAALYTIVAVFPSPLAAQNASLRLNNSVSRFKLRMAKKNYDLRILERASSQ 637


>BC041857-1|AAH41857.1|  681|Homo sapiens R3HDM2 protein protein.
          Length = 681

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
 Frame = +3

Query: 264 TVKGGRHSELAVFRSHSRGVPLPLRRGTKSLREPNNMS--KQYRIKERDEIRLARQARNR 437
           T + GRHS+LA   +     P PL     SLR  N++S  K    K+  ++R+  +A ++
Sbjct: 622 TAENGRHSDLAALYTIVAVFPSPLAAQNASLRLNNSVSRFKLRMAKKNYDLRILERASSQ 681


>AB023219-1|BAA76846.2|  962|Homo sapiens KIAA1002 protein protein.
          Length = 962

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
 Frame = +3

Query: 264  TVKGGRHSELAVFRSHSRGVPLPLRRGTKSLREPNNMS--KQYRIKERDEIRLARQARNR 437
            T + GRHS+LA   +     P PL     SLR  N++S  K    K+  ++R+  +A ++
Sbjct: 903  TAENGRHSDLAALYTIVAVFPSPLAAQNASLRLNNSVSRFKLRMAKKNYDLRILERASSQ 962


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,408,709
Number of Sequences: 237096
Number of extensions: 1307798
Number of successful extensions: 3925
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3925
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4327667848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)