Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_M02
         (468 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    26   0.15 
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       23   1.1  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   2.5  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   2.5  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   4.3  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    21   4.3  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          21   4.3  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   7.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   7.5  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     20   9.9  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    20   9.9  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 26.2 bits (55), Expect = 0.15
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -1

Query: 273 TPTN*PLQRASAT*QPFASHRITRSCSEVSSS 178
           TP++ P QR S +   ++S  +  SCS V ++
Sbjct: 80  TPSSLPTQRTSTSNPTYSSRSVMTSCSSVPTT 111


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 16/44 (36%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
 Frame = -1

Query: 132 CNITEPWTLMK*SL--SSCVRSTLSIGSKRRQTTGKYFCCSCSP 7
           CN    W     SL  S C  +T   G    Q  GK F C C P
Sbjct: 130 CNCKNGWKGKTCSLKDSHCDHTTCKNGGTC-QDLGKTFMCRCPP 172


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 284 DKLIWRLKGYYQKLAL 331
           D L+W   GYY  LA+
Sbjct: 202 DMLLWHTFGYYHILAM 217


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 284 DKLIWRLKGYYQKLAL 331
           D L+W   GYY  LA+
Sbjct: 202 DMLLWHTFGYYHILAM 217


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 465 PAISRPYAVPFS 430
           P + RPY VPF+
Sbjct: 305 PFLKRPYPVPFA 316


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +3

Query: 321 NWLYLNTGRWRLNRFSRRPATNRS 392
           NW YL T ++   +F    + NRS
Sbjct: 48  NWSYLRTPQFEPQQFEVSLSENRS 71


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +3

Query: 321 NWLYLNTGRWRLNRFSRRPATNRS 392
           NW YL T ++   +F    + NRS
Sbjct: 68  NWSYLRTPQFEPQQFEVSLSENRS 91


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 62  IDRVDLTQLDKDYFIN 109
           +DR+  + LDKD FI+
Sbjct: 324 MDRLYFSNLDKDAFIH 339


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -2

Query: 68   CLSAVSGDKLQGNTSAALVH 9
            C S +    LQ N S  L+H
Sbjct: 1379 CYSTIEEKNLQVNESGKLIH 1398


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 206 PGAVPKSAPVDLT 168
           PG  PK APV L+
Sbjct: 38  PGRPPKRAPVGLS 50


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +2

Query: 215 CDAKGCHVADALCK 256
           CD+  C   DA+C+
Sbjct: 420 CDSNPCKHLDAICQ 433


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,273
Number of Sequences: 336
Number of extensions: 2199
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10826639
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)