Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_M02
(468 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0189 - 21039217-21039348,21039480-21039738,21039841-210400... 47 7e-06
12_02_0380 - 18356210-18356329,18356415-18356673,18356754-183569... 42 2e-04
05_01_0072 - 486211-486254,486350-486524,486658-486852,487489-48... 33 0.15
03_06_0555 - 34693067-34693196,34693450-34693688,34693956-346940... 33 0.15
01_07_0344 - 42869465-42869502,42869597-42869771,42869923-428701... 32 0.20
02_05_1240 + 35181983-35182615,35183025-35183856,35183936-351844... 31 0.46
10_06_0158 - 11320173-11320279,11320347-11321038,11321283-113215... 31 0.61
04_03_0985 - 21438036-21438116,21438373-21438495,21438903-214389... 31 0.61
12_02_0408 + 18659494-18660362,18660472-18660634,18660976-186611... 30 0.81
01_06_1320 + 36272716-36273339,36274222-36275762,36276349-362764... 30 0.81
04_04_0824 - 28399144-28399385,28400193-28400312,28400422-284004... 30 1.1
07_03_0712 - 20878272-20879633 29 1.9
04_01_0522 - 6865049-6865131,6865214-6865388,6865692-6865877,686... 29 1.9
10_08_1038 - 22485394-22485960,22486712-22487197 29 2.5
08_02_1277 + 25823835-25825113,25825201-25825418,25825501-258257... 29 2.5
01_06_0794 + 32050413-32050523,32050663-32051391 28 3.3
09_02_0124 - 4546722-4547107,4547677-4547854,4548027-4548215,454... 28 4.3
06_01_1052 + 8312752-8312862,8312969-8313041,8313285-8313362,831... 28 4.3
02_05_0707 + 31096628-31096630,31097037-31097405,31097477-31101715 28 4.3
06_03_1307 + 29218055-29218159,29218249-29218362,29218448-292186... 27 7.5
10_08_0505 + 18384392-18384454,18384593-18384679,18385878-183864... 27 10.0
08_02_1625 + 28336168-28336409,28336491-28336564,28337162-283372... 27 10.0
01_06_0906 + 32886693-32886919,32887589-32887708,32887978-328881... 27 10.0
>11_06_0189 -
21039217-21039348,21039480-21039738,21039841-21040004,
21040371-21040533,21040615-21042137
Length = 746
Score = 47.2 bits (107), Expect = 7e-06
Identities = 28/118 (23%), Positives = 57/118 (48%)
Frame = +2
Query: 107 NVHGSVILQTILDFQRPAKAVSGLLELTSEQLLVILCDAKGCHVADALCKGQFVGVKARD 286
N+HG+ +Q ++D + +S ++ S + ++ D G HVA K KA
Sbjct: 505 NMHGTRTVQKVIDTINTPEQISKVVSALSPGAMRLMTDTNGSHVAQRCLKKLLPEYKAFL 564
Query: 287 KLIWRLKGYYQKLALSQYGSMAFEQIFEAASDEQKLKIMTELSEKSNLLNGTAYGRLI 460
+ L+ + +LA Q+G ++ E ++DEQK ++ +++ + L+ YG +
Sbjct: 565 LDVAALR--FLRLAKDQHGCCIIQKCIEHSNDEQKYNLLCKITSSALSLSEDQYGNYV 620
>12_02_0380 -
18356210-18356329,18356415-18356673,18356754-18356917,
18357235-18357397,18357465-18359020
Length = 753
Score = 42.3 bits (95), Expect = 2e-04
Identities = 28/118 (23%), Positives = 59/118 (50%)
Frame = +2
Query: 107 NVHGSVILQTILDFQRPAKAVSGLLELTSEQLLVILCDAKGCHVADALCKGQFVGVKARD 286
++HG+ ++Q +++ VS ++ S + ++ DA GCHVA C +F + +
Sbjct: 516 DMHGTRVVQKVIETINSPDEVSMVVCALSSGAITLMMDANGCHVA-LRCLQKF-SHEHKA 573
Query: 287 KLIWRLKGYYQKLALSQYGSMAFEQIFEAASDEQKLKIMTELSEKSNLLNGTAYGRLI 460
L+ YY +LA + G ++ A+ EQK +++ ++ ++ L+ YG +
Sbjct: 574 FLLNVAMEYYFELAQDRQGCCIIQKCILHANKEQKNQLLYNITSRALELSEHQYGNYV 631
>05_01_0072 -
486211-486254,486350-486524,486658-486852,487489-487599,
487693-487905,488432-488539,488621-488762,489157-490418,
490460-490480,490842-491228
Length = 885
Score = 32.7 bits (71), Expect = 0.15
Identities = 16/67 (23%), Positives = 33/67 (49%)
Frame = +2
Query: 260 QFVGVKARDKLIWRLKGYYQKLALSQYGSMAFEQIFEAASDEQKLKIMTELSEKSNLLNG 439
+F K++ + + G+ + + QYGS +Q E AS E+K + +E+ ++ L
Sbjct: 535 EFKSNKSKSYELSEIAGHVVEFSADQYGSRFIQQKLETASTEEKDMVFSEIMPQALTLMT 594
Query: 440 TAYGRLI 460
+G +
Sbjct: 595 DVFGNYV 601
Score = 27.9 bits (59), Expect = 4.3
Identities = 11/42 (26%), Positives = 21/42 (50%)
Frame = +2
Query: 335 QYGSMAFEQIFEAASDEQKLKIMTELSEKSNLLNGTAYGRLI 460
Q+ + +++ E D+Q+ I+T + N L YG+ I
Sbjct: 819 QFANYVVQKVLETCDDQQREAILTRIKAHLNTLKKYTYGKHI 860
>03_06_0555 -
34693067-34693196,34693450-34693688,34693956-34694033,
34694057-34694131,34694667-34694831,34695101-34695151,
34695250-34695300,34695462-34695533,34695736-34695948,
34696064-34696214,34696376-34696490,34696665-34696748,
34696841-34696964,34697064-34697145,34697238-34697299,
34697787-34697840,34697944-34698147
Length = 649
Score = 32.7 bits (71), Expect = 0.15
Identities = 22/66 (33%), Positives = 30/66 (45%)
Frame = +2
Query: 185 LTSEQLLVILCDAKGCHVADALCKGQFVGVKARDKLIWRLKGYYQKLALSQYGSMAFEQI 364
LT L+ I+ +G + + K K R K+I LKG+ KLALS YG + I
Sbjct: 335 LTEPLLVRIMNTREGLKIGVSCLKHG--SAKDRKKIIKSLKGHIMKLALSDYGCILLVAI 392
Query: 365 FEAASD 382
D
Sbjct: 393 LSVVDD 398
>01_07_0344 -
42869465-42869502,42869597-42869771,42869923-42870117,
42870678-42870788,42870899-42871111,42871551-42871658,
42871732-42871873,42872150-42873449,42874032-42874085,
42874491-42874923
Length = 922
Score = 32.3 bits (70), Expect = 0.20
Identities = 16/67 (23%), Positives = 32/67 (47%)
Frame = +2
Query: 260 QFVGVKARDKLIWRLKGYYQKLALSQYGSMAFEQIFEAASDEQKLKIMTELSEKSNLLNG 439
+F K++ + + G+ + + QYGS +Q E AS E+K + E+ ++ L
Sbjct: 574 EFKSNKSKSYELSEIAGHVVEFSADQYGSRFIQQKLETASTEEKDMVFAEIMPQALTLMT 633
Query: 440 TAYGRLI 460
+G +
Sbjct: 634 DVFGNYV 640
Score = 28.7 bits (61), Expect = 2.5
Identities = 25/122 (20%), Positives = 54/122 (44%), Gaps = 6/122 (4%)
Frame = +2
Query: 113 HGSVILQTILDFQRPAKAVSGLLELTSEQLLVILCDAKGCHVADALCKGQFVGVKARDKL 292
+G+ ++Q +L+ +P + S ++E Q++ + +V + C F R L
Sbjct: 781 YGNYVVQHVLEHGKPHER-SAIIEKLIGQIVQMSQQKFASNVIEK-CLA-FGNPVERQVL 837
Query: 293 IWRLKG------YYQKLALSQYGSMAFEQIFEAASDEQKLKIMTELSEKSNLLNGTAYGR 454
I + G + + + Q+ + +++ E D+Q+ I+T + N L YG+
Sbjct: 838 IGEMLGSSNESEHLEVMMKDQFANYVVQKVLETCDDQQREMILTRIKAHLNTLKKYTYGK 897
Query: 455 LI 460
I
Sbjct: 898 HI 899
>02_05_1240 +
35181983-35182615,35183025-35183856,35183936-35184497,
35184581-35184722,35184832-35184939,35185055-35185267,
35185355-35185465,35185684-35185878,35186094-35186268,
35186379-35186413
Length = 1001
Score = 31.1 bits (67), Expect = 0.46
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = +2
Query: 260 QFVGVKARDKLIWRLKGYYQKLALSQYGSMAFEQIFEAASDEQKLKIMTELSEKSNLLNG 439
+F K R + + G+ + + QYGS +Q E AS E+K I E+ ++ L
Sbjct: 654 EFKTNKTRSFELLDIVGHVVEFSSDQYGSRFIQQKLETASAEEKDTIFPEILPQARTLMT 713
Query: 440 TAYGRLI 460
+G +
Sbjct: 714 DVFGNYV 720
Score = 29.1 bits (62), Expect = 1.9
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 302 LKGYYQKLALSQYGSMAFEQIFEAASDEQKLKIMTEL 412
LKGY +L+L YG ++ E EQ+ ++ EL
Sbjct: 740 LKGYVLQLSLQMYGCRVIQKALEMVEVEQQTQMALEL 776
Score = 27.5 bits (58), Expect = 5.7
Identities = 24/120 (20%), Positives = 50/120 (41%), Gaps = 1/120 (0%)
Frame = +2
Query: 104 INVHGSVILQTILDFQRPAKAVSGLLELTSEQLLVILCDAKGCHVADALCKGQFVGVKAR 283
+ ++G ++Q L+ + LEL ++ + D G HV + + +
Sbjct: 749 LQMYGCRVIQKALEMVEVEQQTQMALELDGN-IMKCVRDQNGNHVIQKCI--ECIPQERI 805
Query: 284 DKLIWRLKGYYQKLALSQYGSMAFEQIFEAASDEQ-KLKIMTELSEKSNLLNGTAYGRLI 460
+I G+ +L+ YG +++ E +DE + +M E+ + LL YG +
Sbjct: 806 RFIISAFYGHVVELSTHPYGCRVIQRVLEHCNDENTQSTMMEEIMQSVVLLTLDQYGNYV 865
>10_06_0158 -
11320173-11320279,11320347-11321038,11321283-11321509,
11321521-11321611,11321839-11322125,11322428-11322523
Length = 499
Score = 30.7 bits (66), Expect = 0.61
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +1
Query: 118 FCYIANHFRFSASSESGVRSTGADFGTAPGDPVRCEGLSCG*CSLQGSVRWSQSE 282
F +A F++S +SG+R+ G G A DP+ C G +G VR ++E
Sbjct: 120 FGRVARTFQWSIGGQSGLRARG---GAATVDPIGCFGCVFNKNCFEGGVRADRAE 171
>04_03_0985 -
21438036-21438116,21438373-21438495,21438903-21438995,
21439176-21439388,21439589-21439687,21440248-21440317,
21442549-21442619,21442817-21442954,21443034-21443132,
21444061-21444144,21444268-21444324,21444594-21444683,
21444886-21445026,21445778-21445882,21445962-21446114,
21446215-21446316,21446404-21446562,21447039-21447222,
21447336-21447418,21447523-21447588,21447736-21447793,
21447903-21448003,21448269-21448355,21449063-21449185,
21449285-21449364,21449857-21450066,21450159-21450270,
21450709-21450927,21451356-21451726,21451866-21451965,
21452544-21452752,21453232-21453337,21453435-21453767
Length = 1439
Score = 30.7 bits (66), Expect = 0.61
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 275 KARDKLIWRLKGYYQKLALSQYGSMAFEQIFEAASD 382
++R++ RL+G Y KL+L + S EQ A SD
Sbjct: 77 ESREQKARRLRGVYDKLSLEGFSSAQIEQALSALSD 112
>12_02_0408 +
18659494-18660362,18660472-18660634,18660976-18661139,
18661253-18661511,18661605-18661712
Length = 520
Score = 30.3 bits (65), Expect = 0.81
Identities = 25/121 (20%), Positives = 52/121 (42%), Gaps = 2/121 (1%)
Frame = +2
Query: 104 INVHGSVILQTILDFQRPAKAVSGLLELTSEQLLVILCDAKGCHVADALCKGQFVGVKAR 283
+NVHG+ +Q +++ R + + +++ L ++ D G HV C F A
Sbjct: 286 LNVHGTRAVQKLIESLRTREEIQLVVQALRPGFLELIKDPNGNHVVQR-CLQSF---DAN 341
Query: 284 D-KLIWRLKGYY-QKLALSQYGSMAFEQIFEAASDEQKLKIMTELSEKSNLLNGTAYGRL 457
D K I+ + + + +G ++ + EQ+ K++ ++ L AYG
Sbjct: 342 DNKPIFEAAAVHCLDIGMQCHGCCVLQRCIARSGGEQREKLVAAIASNGFELAQDAYGNY 401
Query: 458 I 460
+
Sbjct: 402 V 402
>01_06_1320 +
36272716-36273339,36274222-36275762,36276349-36276490,
36276622-36276729,36276814-36277026,36277113-36277223,
36278056-36278250,36278874-36279048,36279189-36279226
Length = 1048
Score = 30.3 bits (65), Expect = 0.81
Identities = 20/72 (27%), Positives = 33/72 (45%)
Frame = +2
Query: 197 QLLVILCDAKGCHVADALCKGQFVGVKARDKLIWRLKGYYQKLALSQYGSMAFEQIFEAA 376
Q L ++ D G +V + R +L +L G+ L+L YG ++ E
Sbjct: 753 QALSLMTDVFGNYVVQKFF--EHGSAAQRRELADQLFGHVLALSLQMYGCRVIQKAIEVV 810
Query: 377 SDEQKLKIMTEL 412
+QK K++TEL
Sbjct: 811 DLDQKTKMVTEL 822
Score = 29.5 bits (63), Expect = 1.4
Identities = 25/122 (20%), Positives = 56/122 (45%), Gaps = 6/122 (4%)
Frame = +2
Query: 113 HGSVILQTILDFQRPAKAVSGLLELTSEQLLVILCDAKGCHVADALCKGQFVGVKARDKL 292
+G+ ++Q +L+ +P + S ++E + Q++ + +V + F G R+ L
Sbjct: 907 YGNYVVQHVLEHGKPHER-SVIIEKLAGQIIQMSQQKFASNVVEKCLT--FGGPAEREVL 963
Query: 293 IWRLKGY------YQKLALSQYGSMAFEQIFEAASDEQKLKIMTELSEKSNLLNGTAYGR 454
I + G Q + Q+G+ +++ E D+Q+ I++ + + L YG+
Sbjct: 964 INEMLGTTDENEPLQAMMKDQFGNYVVQKVLETCDDQQRELILSRVKVHLSALKKYTYGK 1023
Query: 455 LI 460
I
Sbjct: 1024 HI 1025
Score = 29.1 bits (62), Expect = 1.9
Identities = 16/67 (23%), Positives = 31/67 (46%)
Frame = +2
Query: 260 QFVGVKARDKLIWRLKGYYQKLALSQYGSMAFEQIFEAASDEQKLKIMTELSEKSNLLNG 439
+F KAR + + + + + QYGS +Q E A+ E+K + E+ ++ L
Sbjct: 700 EFKSNKARSFELAEIASHVVEFSADQYGSRFIQQKLETATVEEKDMVFKEIMPQALSLMT 759
Query: 440 TAYGRLI 460
+G +
Sbjct: 760 DVFGNYV 766
>04_04_0824 - 28399144-28399385,28400193-28400312,28400422-28400453,
28400531-28400625,28400713-28400786,28400883-28401018,
28401096-28401333,28401508-28401555,28401593-28401780,
28401862-28401983,28402061-28402226,28402321-28402443,
28403068-28403139,28403244-28403351,28404212-28404328,
28404458-28404596,28404702-28404808,28404904-28405013,
28405141-28405274,28405348-28405497,28405571-28405791,
28405868-28406677,28410261-28410473
Length = 1254
Score = 29.9 bits (64), Expect = 1.1
Identities = 24/93 (25%), Positives = 37/93 (39%), Gaps = 9/93 (9%)
Frame = +2
Query: 23 QKYFPVVCLRLLPIDRVDLTQLDKDYFINVHGS-------VILQTILDFQRPAKA--VSG 175
QK++ V LL L+ LD + I+ + +I L R + +G
Sbjct: 920 QKFYQVTMWLLLKTGLKSLSMLDWELLISFKRATGQKPQRIIFYRFLSLYRNLRGQHFAG 979
Query: 176 LLELTSEQLLVILCDAKGCHVADALCKGQFVGV 274
L +I+CD CH D + +GQF V
Sbjct: 980 FYPCMDIFLTIIVCDFNTCHFRDGVSEGQFYQV 1012
>07_03_0712 - 20878272-20879633
Length = 453
Score = 29.1 bits (62), Expect = 1.9
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 190 FGTAPGDPVRCEGLSCG*CSLQGSVRWSQSEG 285
FG++P D VR G++ G CS S W+ S G
Sbjct: 194 FGSSPADQVRVPGIAFG-CSNASSDDWNGSAG 224
>04_01_0522 -
6865049-6865131,6865214-6865388,6865692-6865877,
6866489-6866599,6866678-6866890,6867446-6867553,
6867632-6867773,6867855-6868951,6871287-6871559
Length = 795
Score = 29.1 bits (62), Expect = 1.9
Identities = 12/51 (23%), Positives = 27/51 (52%)
Frame = +2
Query: 260 QFVGVKARDKLIWRLKGYYQKLALSQYGSMAFEQIFEAASDEQKLKIMTEL 412
+F +L +L+G++ +L+ YG +++ + E+K+ I+ EL
Sbjct: 507 EFATESQLSQLADQLRGHFLQLSFQMYGCRVVQKVIDVVDLERKISIVGEL 557
>10_08_1038 - 22485394-22485960,22486712-22487197
Length = 350
Score = 28.7 bits (61), Expect = 2.5
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = -1
Query: 228 PFASHRITRSCSEVSSSRPDTAFAGR*KSKMVCNITEPWTLMK*SLSSCVRSTLSIGSKR 49
P +S RITRS ++ S++ PD + +IT ++ SS +R+ S +K
Sbjct: 4 PLSSRRITRSMAKASAAAPDATSTAHPPRPALHDITNDSPIVG-LASSGLRTPASTAAKA 62
Query: 48 RQT 40
R T
Sbjct: 63 RPT 65
>08_02_1277 + 25823835-25825113,25825201-25825418,25825501-25825724,
25826468-25827080,25827735-25827775,25830549-25831191,
25832595-25834012,25834110-25834251,25834415-25834522,
25835346-25835558,25835643-25835753,25836099-25836293,
25836555-25836695,25836835-25836909
Length = 1806
Score = 28.7 bits (61), Expect = 2.5
Identities = 34/145 (23%), Positives = 65/145 (44%), Gaps = 9/145 (6%)
Frame = +2
Query: 5 EGEQEQQKYF-PVVCLRLLPID-----RVDLTQLDK---DYFINVHGSVILQTILDFQRP 157
+G++E++K+ P C L + RV+L+ + +Y + HGS +Q L+
Sbjct: 1438 QGQREREKFDDPKACSFLEELKSNRARRVELSDIAGHIVEYSADQHGSRFIQQKLENCTA 1497
Query: 158 AKAVSGLLELTSEQLLVILCDAKGCHVADALCKGQFVGVKARDKLIWRLKGYYQKLALSQ 337
+ S E+ ++ D G +V + + RD L +L G+ L+L
Sbjct: 1498 EEKASVFSEVLPHASS-LMTDVFGNYVIQKFFE-HGTPEQRRD-LATKLVGHVLPLSLQM 1554
Query: 338 YGSMAFEQIFEAASDEQKLKIMTEL 412
YG ++ E +QK++++ EL
Sbjct: 1555 YGCRVIQKALEVMELDQKIELVREL 1579
Score = 28.3 bits (60), Expect = 3.3
Identities = 20/105 (19%), Positives = 45/105 (42%)
Frame = +2
Query: 146 FQRPAKAVSGLLELTSEQLLVILCDAKGCHVADALCKGQFVGVKARDKLIWRLKGYYQKL 325
FQ P++ ++ + ++ D K C + L + V+ D + G+ +
Sbjct: 1424 FQTPSRNMTAYSGVQGQREREKFDDPKACSFLEELKSNRARRVELSD-----IAGHIVEY 1478
Query: 326 ALSQYGSMAFEQIFEAASDEQKLKIMTELSEKSNLLNGTAYGRLI 460
+ Q+GS +Q E + E+K + +E+ ++ L +G +
Sbjct: 1479 SADQHGSRFIQQKLENCTAEEKASVFSEVLPHASSLMTDVFGNYV 1523
>01_06_0794 + 32050413-32050523,32050663-32051391
Length = 279
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +1
Query: 121 CYIANHFR---FSASSESGVRSTGADFGTAPGD 210
C++A H R + +SSE VRST D G+ P D
Sbjct: 203 CHVAFHCRATGWRSSSEFPVRSTALDGGSLPAD 235
>09_02_0124 -
4546722-4547107,4547677-4547854,4548027-4548215,
4548602-4548712,4549024-4549071,4549825-4549966,
4550349-4550695
Length = 466
Score = 27.9 bits (59), Expect = 4.3
Identities = 20/94 (21%), Positives = 41/94 (43%)
Frame = +2
Query: 131 QTILDFQRPAKAVSGLLELTSEQLLVILCDAKGCHVADALCKGQFVGVKARDKLIWRLKG 310
+ +L++ + + L+ E +L ++ D G +V + + G R ++ RLKG
Sbjct: 179 ERVLEWCDDLEILKELISEIVEGVLELVVDQFGNYVVQYVV--EHGGESVRAMIVMRLKG 236
Query: 311 YYQKLALSQYGSMAFEQIFEAASDEQKLKIMTEL 412
L+ +YGS E+ +L I ++
Sbjct: 237 LMVMLSCQKYGSNVMEKCLTIGRIHDRLIIAADI 270
>06_01_1052 +
8312752-8312862,8312969-8313041,8313285-8313362,
8313443-8313523,8313706-8313779,8313865-8313919,
8314031-8314079,8314222-8314359,8314455-8314536,
8315131-8315209,8315357-8315400,8315479-8315673,
8316110-8316185,8317427-8317507,8317623-8317703,
8318128-8318204,8318402-8318499,8318672-8318809,
8319397-8319478,8319564-8319642,8319885-8319931,
8320014-8320228,8320330-8320450,8320529-8320648,
8320731-8320849,8320964-8321036,8321112-8321231,
8321538-8321606,8321756-8321926,8322004-8322051,
8322192-8322333,8323244-8323341,8323684-8323828,
8323928-8324013,8324112-8324222,8324456-8324530,
8324836-8324901,8325036-8325224,8325315-8325425,
8326616-8326696,8327192-8327371
Length = 1385
Score = 27.9 bits (59), Expect = 4.3
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = +2
Query: 236 VADALCKGQFVGVKARDKLIWRLKGYYQKLALSQYGSMAFEQIFEAASDEQKLKIMTELS 415
+ LC G V +++ L L+ QKLA + ++ IF SDE K KI+ S
Sbjct: 85 IVKGLCSGAVVLIRST-MLPSHLEKLNQKLADEKKNALLDGYIFSGLSDELKQKIVVVAS 143
Query: 416 EKSNLLNGTAYGRLIAG 466
+ ++ T G+ +G
Sbjct: 144 GRHDVTERT--GQFFSG 158
>02_05_0707 + 31096628-31096630,31097037-31097405,31097477-31101715
Length = 1536
Score = 27.9 bits (59), Expect = 4.3
Identities = 16/57 (28%), Positives = 32/57 (56%)
Frame = +1
Query: 157 SESGVRSTGADFGTAPGDPVRCEGLSCG*CSLQGSVRWSQSEG*THMETQRLLSETG 327
S+S + S+ A +PG+ CEG + G +Q + S+ G T+ + ++++S+ G
Sbjct: 751 SKSELISSSASPRNSPGNEEGCEGDNIGKLKVQSDMGLSRHAGPTN-DAEKIISDKG 806
>06_03_1307 +
29218055-29218159,29218249-29218362,29218448-29218660,
29218967-29219457,29219653-29219752,29219835-29219894,
29220055-29220147,29220270-29220368,29220484-29220804
Length = 531
Score = 27.1 bits (57), Expect = 7.5
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +2
Query: 275 KARDKLIWRLKGYYQKLALSQYGSMAFEQIFEAASDEQKLKIMTE 409
KAR+KL W G Y A + S+ +Q+ AA +K +++ E
Sbjct: 268 KAREKLSWADIGSYGAAAEVSWMSVGKKQLEYAAESLRKFRLLIE 312
>10_08_0505 +
18384392-18384454,18384593-18384679,18385878-18386409,
18387042-18387564,18387734-18387791
Length = 420
Score = 26.6 bits (56), Expect = 10.0
Identities = 15/27 (55%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = +2
Query: 344 SMAFE-QIFEAASDEQKLKIMTELSEK 421
S +FE Q+ E ASD +K K + ELSEK
Sbjct: 367 SASFENQLSEEASDPEKAKKVWELSEK 393
>08_02_1625 +
28336168-28336409,28336491-28336564,28337162-28337236,
28337433-28337459,28339261-28339634,28339746-28340492
Length = 512
Score = 26.6 bits (56), Expect = 10.0
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -1
Query: 228 PFASHRITRSCSEVSSSRPDTAFAGR 151
PFA+ R + SSS PD++F R
Sbjct: 33 PFAARRARSLATRASSSSPDSSFGSR 58
>01_06_0906 +
32886693-32886919,32887589-32887708,32887978-32888101,
32888224-32888361,32888492-32888701,32889085-32889232,
32890452-32890801,32890909-32890963,32891087-32891382,
32891480-32891531,32891740-32891947,32892064-32892446,
32894102-32894538,32895452-32895643
Length = 979
Score = 26.6 bits (56), Expect = 10.0
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = +2
Query: 197 QLLVILCDAKGCHVADALCKGQFVGVKARDKLIWRLKGYYQKLALSQYGSMAFEQIFE 370
Q+L+ +C GC +L +GVK LI +LKG+ + + +Y +++ +E
Sbjct: 236 QMLLEMCILSGCDYLPSL---PGMGVKRAHALIQKLKGHEKVIKHLRYSAVSVPPQYE 290
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,574,696
Number of Sequences: 37544
Number of extensions: 249816
Number of successful extensions: 807
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 806
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 943260316
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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