Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_M01
(495 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF025467-10|AAB71040.2| 154|Caenorhabditis elegans He1 homologu... 49 2e-06
Z22179-5|CAA80162.2| 786|Caenorhabditis elegans Hypothetical pr... 36 0.016
Z35604-6|CAA84681.1| 305|Caenorhabditis elegans Hypothetical pr... 30 0.80
AF016680-2|AAB66164.2| 253|Caenorhabditis elegans Hypothetical ... 30 0.80
Z32679-3|CAA83596.1| 401|Caenorhabditis elegans Hypothetical pr... 29 2.4
AF039049-10|AAB94247.1| 548|Caenorhabditis elegans Cytochrome p... 29 2.4
Z99280-5|CAB16501.2| 413|Caenorhabditis elegans Hypothetical pr... 28 4.3
AL161712-11|CAC70135.1| 2870|Caenorhabditis elegans Hypothetical... 28 4.3
AL021469-2|CAA16289.2| 92|Caenorhabditis elegans Hypothetical ... 28 4.3
AL132863-1|CAB60573.1| 477|Caenorhabditis elegans Hypothetical ... 27 5.7
AF039049-12|AAB94245.1| 499|Caenorhabditis elegans Cytochrome p... 27 7.5
U64856-6|AAB04989.1| 406|Caenorhabditis elegans Hypothetical pr... 27 9.9
U64856-5|AAT81185.1| 301|Caenorhabditis elegans Hypothetical pr... 27 9.9
>AF025467-10|AAB71040.2| 154|Caenorhabditis elegans He1 homologue
protein 1 protein.
Length = 154
Score = 48.8 bits (111), Expect = 2e-06
Identities = 42/143 (29%), Positives = 64/143 (44%), Gaps = 9/143 (6%)
Frame = +3
Query: 54 FAYL*GLAEERVAEIQSCPGVSNDGCSVNEVRIDPCNTNHK-----CVLKQGTVGRMTVN 218
F L GLA EI +DG +V++V+ D C K C+ K+G+ + +
Sbjct: 6 FLALLGLAAAEFIEI-GYKVCKSDG-TVSQVKADGCELTVKDGKKVCLFKKGSRPIIQIA 63
Query: 219 FTPNFDASKVKFGLYWDNGGD--VPFPDLQSDNACEY-TTCPLQAGQPKTLTYSLPIGKK 389
F P+ D K+K + GG V FP SD AC Y CP+ AG+ + S+ I +
Sbjct: 64 FKPSKDTDKLKTSVRAKVGGSAMVDFPQTNSD-ACTYGVKCPVSAGENQIFEQSISITEN 122
Query: 390 VPKG-TFMFKCKFWNEENGSQSC 455
P G + ++G + C
Sbjct: 123 HPAGEVIQVNWQLTRPDSGKEVC 145
>Z22179-5|CAA80162.2| 786|Caenorhabditis elegans Hypothetical
protein F58A4.5 protein.
Length = 786
Score = 35.9 bits (79), Expect = 0.016
Identities = 19/68 (27%), Positives = 35/68 (51%)
Frame = +3
Query: 237 ASKVKFGLYWDNGGDVPFPDLQSDNACEYTTCPLQAGQPKTLTYSLPIGKKVPKGTFMFK 416
AS +K + W+NGG++ F D+ + + Y + L +++P+G+K+P F
Sbjct: 99 ASNLKCNIAWENGGEIEFNDMWAPES-RYYGVAIDKMSIGGLWHTVPVGQKLP-----FV 152
Query: 417 CKFWNEEN 440
C F + N
Sbjct: 153 CTFQGKSN 160
>Z35604-6|CAA84681.1| 305|Caenorhabditis elegans Hypothetical
protein ZK1058.6 protein.
Length = 305
Score = 30.3 bits (65), Expect = 0.80
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +3
Query: 345 GQPKTLTYSLPIGKKVPKGTFMFKCKFWN--EENGSQSCCFET 467
G PK ++ + +G + P+G FK F N EENG +S E+
Sbjct: 47 GYPKWNSFGITMGTRTPEGRKEFKRYFENAIEENGEESKLIES 89
>AF016680-2|AAB66164.2| 253|Caenorhabditis elegans Hypothetical
protein R12A1.3 protein.
Length = 253
Score = 30.3 bits (65), Expect = 0.80
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +3
Query: 102 SCPGVSNDGCSVNEVRIDPCNTNHKCVLKQGTVGR 206
+CP +N G + D CN++ C+ ++ TVG+
Sbjct: 207 ACPADANSGLNCLFAHADACNSDKDCLGRENTVGQ 241
>Z32679-3|CAA83596.1| 401|Caenorhabditis elegans Hypothetical
protein C05B5.3 protein.
Length = 401
Score = 28.7 bits (61), Expect = 2.4
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -2
Query: 221 EVNGHAPDRSLFQNAFVIRIARIDSDFVNRAAIIRNPRT--GLNFGHSLLG 75
++NG+ P S VI IAR SD + + + T G NFG+ G
Sbjct: 95 QINGNVPGSSSSNQQPVIYIARAGSDKYKNSEVTTSTPTPNGFNFGNGFQG 145
>AF039049-10|AAB94247.1| 548|Caenorhabditis elegans Cytochrome p450
family protein 35B1 protein.
Length = 548
Score = 28.7 bits (61), Expect = 2.4
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 443 PVLFIPEFTFEHERTLRHLFPNG*GVRKCLG 351
P F PE E+E+ L + P G G R C+G
Sbjct: 465 PDKFYPERFIENEQLLSQIIPFGIGKRSCVG 495
>Z99280-5|CAB16501.2| 413|Caenorhabditis elegans Hypothetical
protein Y57G11B.3 protein.
Length = 413
Score = 27.9 bits (59), Expect = 4.3
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 264 WDNGGDVPFPDLQSDNACEYTTCPLQAGQP 353
W NG VP PDL+++ TCP + P
Sbjct: 182 WTNGEMVPMPDLRAEMP---ATCPFKGNPP 208
>AL161712-11|CAC70135.1| 2870|Caenorhabditis elegans Hypothetical
protein Y66D12A.14 protein.
Length = 2870
Score = 27.9 bits (59), Expect = 4.3
Identities = 20/58 (34%), Positives = 28/58 (48%)
Frame = +3
Query: 228 NFDASKVKFGLYWDNGGDVPFPDLQSDNACEYTTCPLQAGQPKTLTYSLPIGKKVPKG 401
+F+ SK+K YW GG+ P P D+A +Q P T T + I K + KG
Sbjct: 2357 SFNISKIKNLAYWVVGGE-PLPQSLLDSALALGIKVIQNYGP-TETTAFAIAKHMKKG 2412
>AL021469-2|CAA16289.2| 92|Caenorhabditis elegans Hypothetical
protein Y116A8B.4 protein.
Length = 92
Score = 27.9 bits (59), Expect = 4.3
Identities = 18/66 (27%), Positives = 28/66 (42%)
Frame = +3
Query: 30 YCCTSYSPFAYL*GLAEERVAEIQSCPGVSNDGCSVNEVRIDPCNTNHKCVLKQGTVGRM 209
Y TS +P + E + PG SN+ N +I P + +++ TV R
Sbjct: 22 YIVTSPTPTCLVESGHPEYSNSTFNSPGSSNESQRPNYYQIQPPSPGEMVIVRTTTVTRN 81
Query: 210 TVNFTP 227
T + TP
Sbjct: 82 TTSITP 87
>AL132863-1|CAB60573.1| 477|Caenorhabditis elegans Hypothetical
protein Y37H2A.1 protein.
Length = 477
Score = 27.5 bits (58), Expect = 5.7
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = -1
Query: 153 RFGLR*PSSHHSKPQDR-IEFRPLSPRPNPKDRQTANTKYS 34
R G P+ HHS+P ++ RP+SP+ + T YS
Sbjct: 83 RLGGAAPTMHHSRPPPPPLDRRPMSPQNASRPLPVRGTNYS 123
>AF039049-12|AAB94245.1| 499|Caenorhabditis elegans Cytochrome p450
family protein 35B3 protein.
Length = 499
Score = 27.1 bits (57), Expect = 7.5
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -2
Query: 443 PVLFIPEFTFEHERTLRHLFPNG*GVRKCLG 351
P F PE E+ + L + P G G R C+G
Sbjct: 416 PSKFYPERFIENGKLLNQIIPFGIGKRSCVG 446
>U64856-6|AAB04989.1| 406|Caenorhabditis elegans Hypothetical
protein T25F10.6a protein.
Length = 406
Score = 26.6 bits (56), Expect = 9.9
Identities = 21/72 (29%), Positives = 30/72 (41%)
Frame = +3
Query: 183 LKQGTVGRMTVNFTPNFDASKVKFGLYWDNGGDVPFPDLQSDNACEYTTCPLQAGQPKTL 362
LK T GR VNFTP+ S ++ + +G + E P+QAG K
Sbjct: 55 LKSPTPGRQQVNFTPSIPQSVLRKQQNYSSGKPSTIHTKEKLMRSE-GIIPIQAGSNKYA 113
Query: 363 TYSLPIGKKVPK 398
+ G VP+
Sbjct: 114 SQKGMTGFGVPR 125
>U64856-5|AAT81185.1| 301|Caenorhabditis elegans Hypothetical
protein T25F10.6b protein.
Length = 301
Score = 26.6 bits (56), Expect = 9.9
Identities = 21/72 (29%), Positives = 30/72 (41%)
Frame = +3
Query: 183 LKQGTVGRMTVNFTPNFDASKVKFGLYWDNGGDVPFPDLQSDNACEYTTCPLQAGQPKTL 362
LK T GR VNFTP+ S ++ + +G + E P+QAG K
Sbjct: 55 LKSPTPGRQQVNFTPSIPQSVLRKQQNYSSGKPSTIHTKEKLMRSE-GIIPIQAGSNKYA 113
Query: 363 TYSLPIGKKVPK 398
+ G VP+
Sbjct: 114 SQKGMTGFGVPR 125
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,167,157
Number of Sequences: 27780
Number of extensions: 312515
Number of successful extensions: 831
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 830
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 935344784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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