Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_L21
(403 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 226 5e-60
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 226 5e-60
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 226 5e-60
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 226 5e-60
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 226 5e-60
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 226 5e-60
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 225 1e-59
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 223 4e-59
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 219 6e-58
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 187 2e-48
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 186 4e-48
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 186 4e-48
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 185 9e-48
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 180 5e-46
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 133 5e-32
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 116 8e-27
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 90 5e-19
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 77 5e-15
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 47 4e-06
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 47 4e-06
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 40 9e-04
AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical... 34 0.044
U42439-7|AAA83511.1| 304|Caenorhabditis elegans Collagen protei... 30 0.71
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 29 1.7
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 29 1.7
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 29 1.7
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 29 1.7
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 28 2.2
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 28 2.2
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 2.9
Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical pr... 27 6.7
Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical p... 27 6.7
Z78415-7|CAH60759.1| 844|Caenorhabditis elegans Hypothetical pr... 27 6.7
Z78415-5|CAB01670.1| 925|Caenorhabditis elegans Hypothetical pr... 27 6.7
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 226 bits (552), Expect = 5e-60
Identities = 101/102 (99%), Positives = 102/102 (100%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 277
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 278 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 403
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 102
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 226 bits (552), Expect = 5e-60
Identities = 101/102 (99%), Positives = 102/102 (100%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 277
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 278 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 403
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 102
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 226 bits (552), Expect = 5e-60
Identities = 101/102 (99%), Positives = 102/102 (100%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 277
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 278 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 403
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 102
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 226 bits (552), Expect = 5e-60
Identities = 101/102 (99%), Positives = 102/102 (100%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 277
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 278 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 403
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 102
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 226 bits (552), Expect = 5e-60
Identities = 101/102 (99%), Positives = 102/102 (100%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 277
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 278 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 403
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 102
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 226 bits (552), Expect = 5e-60
Identities = 101/102 (99%), Positives = 102/102 (100%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 277
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 278 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 403
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 102
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 225 bits (549), Expect = 1e-59
Identities = 100/102 (98%), Positives = 102/102 (100%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 277
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 278 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 403
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 102
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 223 bits (545), Expect = 4e-59
Identities = 98/102 (96%), Positives = 102/102 (100%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 277
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 278 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 403
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 102
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 219 bits (535), Expect = 6e-58
Identities = 97/100 (97%), Positives = 100/100 (100%)
Frame = +2
Query: 104 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 283
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 284 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 403
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEH
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEH 101
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 187 bits (456), Expect = 2e-48
Identities = 83/84 (98%), Positives = 84/84 (100%)
Frame = +2
Query: 152 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 331
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 332 NWDDMEKIWHHTFYNELRVAPEEH 403
NWDDMEKIWHHTFYNELRVAPEEH
Sbjct: 65 NWDDMEKIWHHTFYNELRVAPEEH 88
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 186 bits (454), Expect = 4e-48
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 277
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 278 SKRGILTLKYPIEHGIVTNWDDMEKI 355
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 186 bits (454), Expect = 4e-48
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 277
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 278 SKRGILTLKYPIEHGIVTNWDDMEKI 355
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 185 bits (451), Expect = 9e-48
Identities = 84/86 (97%), Positives = 86/86 (100%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 277
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 278 SKRGILTLKYPIEHGIVTNWDDMEKI 355
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 180 bits (437), Expect = 5e-46
Identities = 81/83 (97%), Positives = 83/83 (100%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 277
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 278 SKRGILTLKYPIEHGIVTNWDDM 346
SKRGILTLKYPIEHGIVTNWDDM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDM 83
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 133 bits (321), Expect = 5e-32
Identities = 58/58 (100%), Positives = 58/58 (100%)
Frame = +2
Query: 230 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 403
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 58
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 116 bits (278), Expect = 8e-27
Identities = 48/95 (50%), Positives = 70/95 (73%), Gaps = 1/95 (1%)
Frame = +2
Query: 122 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 301
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A+S RG+ ++
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRGLFSI 70
Query: 302 KYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEH 403
+YP+EHGIV NW DMEKIW + F ++L++ PEEH
Sbjct: 71 EYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEH 105
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 90.2 bits (214), Expect = 5e-19
Identities = 45/96 (46%), Positives = 62/96 (64%), Gaps = 3/96 (3%)
Frame = +2
Query: 122 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM-VGMGQ-KDSYVGDEAQSKRGIL 295
+VVDNG+G K G+AG + P +FPS+VGRP + VG + KD VG+E R +L
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 296 TLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEE 400
+ YP+++GIV NWDDM +W HTF E L + P+E
Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKE 104
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 77.0 bits (181), Expect = 5e-15
Identities = 43/115 (37%), Positives = 59/115 (51%), Gaps = 13/115 (11%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI------VGRPRHQG------VMVGM 241
M ++ A V+DNG+G K G+AG+ P+ + PS V Q V G+
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGI 60
Query: 242 GQKDSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 403
D ++GDEA S T+KYPI HGIV +WD ME+ W + LR PE+H
Sbjct: 61 DDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDH 115
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 47.2 bits (107), Expect = 4e-06
Identities = 27/86 (31%), Positives = 43/86 (50%)
Frame = +2
Query: 113 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 292
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 293 LTLKYPIEHGIVTNWDDMEKIWHHTF 370
++ PIE G V NWD ++IW TF
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF 82
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 47.2 bits (107), Expect = 4e-06
Identities = 27/86 (31%), Positives = 43/86 (50%)
Frame = +2
Query: 113 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 292
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 293 LTLKYPIEHGIVTNWDDMEKIWHHTF 370
++ PIE G V NWD ++IW TF
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF 82
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 39.5 bits (88), Expect = 9e-04
Identities = 33/116 (28%), Positives = 52/116 (44%), Gaps = 17/116 (14%)
Frame = +2
Query: 107 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD--EAQS 280
+EV+ LV D GS + GFAG++ P+ PS + Q+ GD + Q+
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSKVQT 68
Query: 281 KR------GILTLKYP---------IEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 403
KR G + P ++ G++ +W+ EKI H++ N L P EH
Sbjct: 69 KREKNFFIGTTKIIVPRARTNMESFMKEGLIEDWELFEKIVEHSYENILYSNPSEH 124
>AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical
protein F59E12.1 protein.
Length = 811
Score = 33.9 bits (74), Expect = 0.044
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = -2
Query: 243 PMPTMTPW*RGRPTIEGNTARGASSPAKPALHIPDPL 133
P T TP RGRP I + ++ P P PDPL
Sbjct: 336 PPATQTPRSRGRPRIHSSASKKTEKPETPRAESPDPL 372
>U42439-7|AAA83511.1| 304|Caenorhabditis elegans Collagen protein
110 protein.
Length = 304
Score = 29.9 bits (64), Expect = 0.71
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +1
Query: 205 GATSSPGRHGRHGSEG 252
G + +PGRHGRHG+ G
Sbjct: 109 GPSGTPGRHGRHGAPG 124
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 28.7 bits (61), Expect = 1.7
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -2
Query: 216 RGRPTIEGNTARGASSPAKPALHIPDPLSTTNAATSS 106
R P +E + +SSPA P++ P P +T++ +TSS
Sbjct: 641 RAHPEVEQPVS--SSSPATPSISGPPPCATSSGSTSS 675
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 28.7 bits (61), Expect = 1.7
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -2
Query: 216 RGRPTIEGNTARGASSPAKPALHIPDPLSTTNAATSS 106
R P +E + +SSPA P++ P P +T++ +TSS
Sbjct: 642 RAHPEVEQPVS--SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 28.7 bits (61), Expect = 1.7
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -2
Query: 216 RGRPTIEGNTARGASSPAKPALHIPDPLSTTNAATSS 106
R P +E + +SSPA P++ P P +T++ +TSS
Sbjct: 642 RAHPEVEQPVS--SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 28.7 bits (61), Expect = 1.7
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -2
Query: 216 RGRPTIEGNTARGASSPAKPALHIPDPLSTTNAATSS 106
R P +E + +SSPA P++ P P +T++ +TSS
Sbjct: 642 RAHPEVEQPVS--SSSPATPSISGPPPCATSSGSTSS 676
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 28.3 bits (60), Expect = 2.2
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = -2
Query: 327 TMPCSMGYLSVRIPLLLCASSPT*ESF*PMPTMTPW*RGRPTIEGN-TARGASSPAKPAL 151
T+ S PL++ +SS S T+TP +G PT N S+P P
Sbjct: 451 TLTLSQSPTPTSTPLVVSSSSSGSSSTVVTSTITPSTQGVPTSTSNQPTPSTSNPTTPKS 510
Query: 150 HIPDPLSTTNAATSSS 103
+ STT A +++S
Sbjct: 511 TVTASPSTTGATSTAS 526
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 28.3 bits (60), Expect = 2.2
Identities = 20/51 (39%), Positives = 21/51 (41%), Gaps = 5/51 (9%)
Frame = +1
Query: 205 GATSSPGRHGRHGSEGLLRR**G-TEQEGYPHTQIPH----RTRHRHQLGR 342
G PGRHGRHGS R G + G PH H H H GR
Sbjct: 358 GPPHCPGRHGRHGSRSHSPRGHGHGGRHGPPHCPGRHGHHGPPHHHHHDGR 408
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 2.9
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 152 KAGFAGDDAPRAVFPSIVGRPRHQG 226
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 26.6 bits (56), Expect = 6.7
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +2
Query: 206 GRPRHQGVMVGMGQKDSYVGD----EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 370
G PRH+ + G+ ++++V + EA + + K HG +WD++ K + TF
Sbjct: 629 GIPRHE-ISHGVSDEEAFVREASIIEAVKLKNLRNKKAGEFHGTTKSWDNITKSEYGTF 686
>Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 26.6 bits (56), Expect = 6.7
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +2
Query: 206 GRPRHQGVMVGMGQKDSYVGD----EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 370
G PRH+ + G+ ++++V + EA + + K HG +WD++ K + TF
Sbjct: 629 GIPRHE-ISHGVSDEEAFVREASIIEAVKLKNLRNKKAGEFHGTTKSWDNITKSEYGTF 686
>Z78415-7|CAH60759.1| 844|Caenorhabditis elegans Hypothetical
protein C17G1.4b protein.
Length = 844
Score = 26.6 bits (56), Expect = 6.7
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +1
Query: 217 SPGRHGRHGSEGLLRR**GTEQEGYPHTQIPHRTRHRHQL 336
+PG HG GS L ++Q+ H +PH +++ L
Sbjct: 373 TPGSHGTVGSNAPLSHQKPSQQQQSMHNHLPHHQYNQNNL 412
>Z78415-5|CAB01670.1| 925|Caenorhabditis elegans Hypothetical
protein C17G1.4a protein.
Length = 925
Score = 26.6 bits (56), Expect = 6.7
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +1
Query: 217 SPGRHGRHGSEGLLRR**GTEQEGYPHTQIPHRTRHRHQL 336
+PG HG GS L ++Q+ H +PH +++ L
Sbjct: 373 TPGSHGTVGSNAPLSHQKPSQQQQSMHNHLPHHQYNQNNL 412
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,372,528
Number of Sequences: 27780
Number of extensions: 197594
Number of successful extensions: 715
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 661
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 706
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 630384202
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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