Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_L20
(481 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 81 1e-16
SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces po... 73 3e-14
SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 71 9e-14
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 49 3e-07
SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccha... 46 2e-06
SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosac... 40 1e-04
SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyc... 40 1e-04
SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|c... 36 0.003
SPAC959.05c |||protein disulfide isomerase |Schizosaccharomyces ... 30 0.21
SPAC1002.11 |gaa1||GPI-anchor transamidase complex subunit Gaa1 ... 26 3.4
SPBC2F12.05c |||sterol binding ankyrin repeat protein|Schizosacc... 25 5.9
SPCC126.08c |||lectin |Schizosaccharomyces pombe|chr 3|||Manual 25 7.8
>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 359
Score = 80.6 bits (190), Expect = 1e-16
Identities = 48/154 (31%), Positives = 73/154 (47%), Gaps = 2/154 (1%)
Frame = +2
Query: 8 DADDHKSIAGQYGVSGFPTIKIFTGSKHTPYQGQRTAEAFVDAALKAAKEKAYDNLXXXX 187
DAD H +A +Y ++GFPT+ F P Q + VD+ + EK
Sbjct: 80 DADTHSDVADKYHITGFPTLIWFPPDGSEPVQYSNARD--VDSLTQFVSEKT-----GIK 132
Query: 188 XXXXXXXXXVITLTDSNFKELVLDSEDLWLVEFYAPWCGHCKNLEPHWAKAATELKGK-- 361
V+ L NF ++V+D + LVEFYA WCG+CK L P + K +
Sbjct: 133 KRKIVLPSNVVELDSLNFDKVVMDDKKDVLVEFYADWCGYCKRLAPTYETLGKVFKNEPN 192
Query: 362 VKVGAVDATVHQAMASRYQVQAYPTIKMFPAGKK 463
V++ ++A V + ++V ++PTIK FP K
Sbjct: 193 VEIVKINADVFADIGRLHEVASFPTIKFFPKDDK 226
Score = 61.7 bits (143), Expect = 6e-11
Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Frame = +2
Query: 275 LVEFYAPWCGHCKNLEPHWAK--AATELKGKVKVGAVDATVHQAMASRYQVQAYPTIKMF 448
L+EFYA WCGHCK+L P + + A E V +G +DA H +A +Y + +PT+ F
Sbjct: 43 LIEFYATWCGHCKSLAPVYEELGALFEDHNDVLIGKIDADTHSDVADKYHITGFPTLIWF 102
Query: 449 P 451
P
Sbjct: 103 P 103
>SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 363
Score = 72.5 bits (170), Expect = 3e-14
Identities = 39/87 (44%), Positives = 56/87 (64%), Gaps = 3/87 (3%)
Frame = +2
Query: 218 ITLTDSNFKELVLDSEDLWLVEFYAPWCGHCKNLEPHWAKAATELKGKVKVGAV--DATV 391
I L NF++ V ++ LV FYAPWCG+CK L P + K A+ L + V AV DA
Sbjct: 34 IELNSKNFRKFV-KAKGPSLVVFYAPWCGYCKKLVPTYQKLASNLHSLLPVTAVDCDADQ 92
Query: 392 HQAMASRYQVQAYPTIKM-FPAGKKTS 469
++A+ S+YQVQ +PTIK+ +P+ K +S
Sbjct: 93 NRAVCSQYQVQGFPTIKLVYPSSKGSS 119
Score = 34.7 bits (76), Expect = 0.007
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 6/42 (14%)
Frame = +2
Query: 8 DADDHKSIAGQYGVSGFPTIK-IFTGSK-----HTPYQGQRT 115
DAD ++++ QY V GFPTIK ++ SK T Y G R+
Sbjct: 89 DADQNRAVCSQYQVQGFPTIKLVYPSSKGSSLSSTDYNGDRS 130
>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 70.9 bits (166), Expect = 9e-14
Identities = 36/87 (41%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
Frame = +2
Query: 215 VITLTDSNFKELVLDSEDLWLVEFYAPWCGHCKNLEPHWAKAATELK--GKVKVGAVDAT 388
++ L NF ++V+D LVEFYAPWCGHCKNL P + K A E V V +DAT
Sbjct: 357 LVVLVADNFDDIVMDETKDVLVEFYAPWCGHCKNLAPTYEKLAEEYSDDSNVVVAKIDAT 416
Query: 389 VHQAMASRYQVQAYPTIKMFPAGKKTS 469
+ S + +PTI F A K +
Sbjct: 417 ENDISVS---ISGFPTIMFFKANDKVN 440
Score = 70.1 bits (164), Expect = 2e-13
Identities = 30/74 (40%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Frame = +2
Query: 251 VLDSEDLWLVEFYAPWCGHCKNLEPHWAKAATEL-KGKVKVGAVDATVHQAMASRYQVQA 427
++ ++ + +V+FYAPWCGHCK L P + AA EL K + + VD T + S Y ++
Sbjct: 35 LITADKVLMVKFYAPWCGHCKALAPEYESAADELEKDGISLVEVDCTEEGDLCSEYSIRG 94
Query: 428 YPTIKMFPAGKKTS 469
YPT+ +F GK+ S
Sbjct: 95 YPTLNVFKNGKQIS 108
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 49.2 bits (112), Expect = 3e-07
Identities = 19/73 (26%), Positives = 36/73 (49%)
Frame = +2
Query: 230 DSNFKELVLDSEDLWLVEFYAPWCGHCKNLEPHWAKAATELKGKVKVGAVDATVHQAMAS 409
D++ + D E W ++FY+ C C ++ W A ++GK+ V ++ V +
Sbjct: 288 DADIDAALTDKEG-WFIQFYSSECDDCDDVSTAWYAMANRMRGKLNVAHINCAVSKRACK 346
Query: 410 RYQVQAYPTIKMF 448
+Y +Q +PT F
Sbjct: 347 QYSIQYFPTFLFF 359
Score = 45.2 bits (102), Expect = 5e-06
Identities = 26/86 (30%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Frame = +2
Query: 218 ITLTDSNFKELVLDSEDLWLVEFYAPWCGHCKNLEPHW----AKAATELKG-KVKVGAVD 382
+ LTD++ + V S+ W +++Y P CG CK L P W KA +++G G VD
Sbjct: 29 VPLTDNDLESEV--SKGTWFIKYYLPSCGACKRLGPMWDNMVEKAKEQVEGSNFHFGEVD 86
Query: 383 ATVHQAMASRYQVQAYPTIKMFPAGK 460
+ + ++S ++A PT+ ++ G+
Sbjct: 87 CS--KELSSCANIRAVPTLYLYQNGE 110
>SPBC12D12.07c |trx2||mitochondrial thioredoxin
Trx2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 121
Score = 46.4 bits (105), Expect = 2e-06
Identities = 24/70 (34%), Positives = 39/70 (55%)
Frame = +2
Query: 254 LDSEDLWLVEFYAPWCGHCKNLEPHWAKAATELKGKVKVGAVDATVHQAMASRYQVQAYP 433
+ ++ + +V+FYA WCG CK L+P K +E K AV+A +A + V A P
Sbjct: 32 ISADKVTVVDFYADWCGPCKYLKPFLEK-LSEQNQKASFIAVNADKFSDIAQKNGVYALP 90
Query: 434 TIKMFPAGKK 463
T+ +F G++
Sbjct: 91 TMVLFRKGQE 100
>SPBC577.08c |txl1|trx3|thioredoxin-like I protein
Txl1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 290
Score = 40.3 bits (90), Expect = 1e-04
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +2
Query: 278 VEFYAPWCGHCKNLEPHWAKAATELKG-KVKVGAVDATVHQAMASRYQVQAYPTIKMFPA 454
V+ YA WCG CK + P +++ A++ K V+ + +AS V+A PT F
Sbjct: 24 VDCYADWCGPCKAISPLFSQLASKYASPKFVFAKVNVDEQRQIASGLGVKAMPTFVFFEN 83
Query: 455 GKK 463
GK+
Sbjct: 84 GKQ 86
>SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 103
Score = 40.3 bits (90), Expect = 1e-04
Identities = 22/82 (26%), Positives = 40/82 (48%)
Frame = +2
Query: 233 SNFKELVLDSEDLWLVEFYAPWCGHCKNLEPHWAKAATELKGKVKVGAVDATVHQAMASR 412
S FK +V + L +V+F+A WCG CK + P + + + + VD +A+
Sbjct: 9 SEFKSIVCQDK-LVVVDFFATWCGPCKAIAPKFEQFSNTYSDATFI-KVDVDQLSEIAAE 66
Query: 413 YQVQAYPTIKMFPAGKKTSDSI 478
V A P+ ++ G+K + +
Sbjct: 67 AGVHAMPSFFLYKNGEKIEEIV 88
>SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 35.9 bits (79), Expect = 0.003
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +2
Query: 239 FKELVLDS-EDLWLVEFYAPWCGHCKNLEPHWAKAATELKGKVKVGAVDATVHQAMASRY 415
F+E++ + E + L+ FYAPW CK + + + A + K V + ++A +A +
Sbjct: 11 FQEILQNGKEQIILLNFYAPWAAPCKQMNQVFDQFAKDTKNAVFL-KIEAEKFSDIAESF 69
Query: 416 QVQAYPTIKMFPAGK 460
V A P + K
Sbjct: 70 DVNAVPLFVLIHGAK 84
>SPAC959.05c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 632
Score = 29.9 bits (64), Expect = 0.21
Identities = 10/50 (20%), Positives = 24/50 (48%)
Frame = +2
Query: 299 CGHCKNLEPHWAKAATELKGKVKVGAVDATVHQAMASRYQVQAYPTIKMF 448
C C + E W+ ++K+ V+ + M + + ++ +PT ++F
Sbjct: 209 CEDCFHWEAVWSSITRNTDERLKMAQVNCDEEKEMCNHFHIKKFPTFRVF 258
Score = 27.5 bits (58), Expect = 1.1
Identities = 9/33 (27%), Positives = 16/33 (48%)
Frame = +2
Query: 8 DADDHKSIAGQYGVSGFPTIKIFTGSKHTPYQG 106
+ D+ K + + + FPT ++F G Y G
Sbjct: 236 NCDEEKEMCNHFHIKKFPTFRVFQGFDSIQYNG 268
>SPAC1002.11 |gaa1||GPI-anchor transamidase complex subunit Gaa1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 581
Score = 25.8 bits (54), Expect = 3.4
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -1
Query: 190 SRFFAQIVICFLFSCFECCINKCFSCPLSLVWCVFAASEYFNSW 59
S FA ++ F F C ++K + PL W E FNSW
Sbjct: 502 SLLFA-VLTYFSTFIFLCSLSKILNGPLVPFWLWAKEYELFNSW 544
>SPBC2F12.05c |||sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1310
Score = 25.0 bits (52), Expect = 5.9
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +3
Query: 393 IKPWPPVTKSRLIPPSRCSQRARRQATVS 479
+KPW P T +RL P R + + S
Sbjct: 1208 LKPWLPPTDTRLRPDQRAMENGQYDLAAS 1236
>SPCC126.08c |||lectin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 312
Score = 24.6 bits (51), Expect = 7.8
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = +2
Query: 56 FPTIKIFTGSKHTPYQGQRTAEAFVDAALKAAKEKAYD 169
FP + + G HTPY + +A A+ A + D
Sbjct: 144 FPRVIVMKGDGHTPYDYENDGKANEIASCSALNVRGND 181
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,944,027
Number of Sequences: 5004
Number of extensions: 33706
Number of successful extensions: 121
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 115
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 184020746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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