Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_L19
(360 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 64 8e-12
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 42 3e-05
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 42 4e-05
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 42 4e-05
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 39 2e-04
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 34 0.006
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 34 0.008
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 33 0.010
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 33 0.013
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 32 0.031
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 32 0.031
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 31 0.054
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 29 0.16
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 29 0.22
SPBC13A2.04c |||PTR family peptide transporter|Schizosaccharomyc... 27 0.88
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 26 1.5
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 26 2.0
SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces p... 26 2.0
SPAC27E2.09 |mak2|phk1|histidine kinase Mak2 |Schizosaccharomyce... 25 3.5
SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2 |Schizo... 24 6.2
SPAC6G10.06 |||amino acid oxidase |Schizosaccharomyces pombe|chr... 24 6.2
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 24 6.2
SPBC14F5.01 ||SPBC1861.10|sequence orphan|Schizosaccharomyces po... 24 6.2
SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces ... 24 8.2
SPBP35G2.06c |nup131|Nup133a|nucleoporin Nup131|Schizosaccharomy... 24 8.2
SPBC1604.15 |gpi16||pig-T |Schizosaccharomyces pombe|chr 2|||Manual 24 8.2
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 63.7 bits (148), Expect = 8e-12
Identities = 27/33 (81%), Positives = 29/33 (87%)
Frame = +3
Query: 261 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYI 359
M IKCVVVGDGAVGKTCLLISYTTN FP +Y+
Sbjct: 1 MPTIKCVVVGDGAVGKTCLLISYTTNKFPSDYV 33
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 41.9 bits (94), Expect = 3e-05
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +3
Query: 273 KCVVVGDGAVGKTCLLISYTTNAFPGEYI 359
K VVVGDG GKTCLLI +++ FP Y+
Sbjct: 16 KLVVVGDGGCGKTCLLIVFSSGTFPERYV 44
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 41.5 bits (93), Expect = 4e-05
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +3
Query: 273 KCVVVGDGAVGKTCLLISYTTNAFPGEYI 359
K V+VGDGA GKTCLLI ++ FP Y+
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYV 36
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 41.5 bits (93), Expect = 4e-05
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +3
Query: 273 KCVVVGDGAVGKTCLLISYTTNAFPGEYI 359
K V+VGDGA GKTCLLI ++ FP Y+
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYV 36
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 39.1 bits (87), Expect = 2e-04
Identities = 18/29 (62%), Positives = 20/29 (68%)
Frame = +3
Query: 273 KCVVVGDGAVGKTCLLISYTTNAFPGEYI 359
K VVVGDGA GKT LL +T FP EY+
Sbjct: 10 KLVVVGDGACGKTSLLSVFTLGYFPTEYV 38
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 34.3 bits (75), Expect = 0.006
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 270 IKCVVVGDGAVGKTCLLISYTTNAFPGEY 356
+K V++GD VGKTCL+ + F EY
Sbjct: 9 LKVVILGDSGVGKTCLMNQFVNQKFSREY 37
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 33.9 bits (74), Expect = 0.008
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +3
Query: 270 IKCVVVGDGAVGKTCLLISYTTNAFPGEYI 359
IK +++GD VGK+CLL+ ++ ++F +I
Sbjct: 10 IKLLLIGDSGVGKSCLLLRFSEDSFTPSFI 39
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 33.5 bits (73), Expect = 0.010
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +3
Query: 273 KCVVVGDGAVGKTCLLISYTTNAFPGEY 356
K V++GDGA GKT LL +T FP Y
Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQVY 42
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 33.1 bits (72), Expect = 0.013
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +3
Query: 255 TNMQAIKCVVVGDGAVGKTCLLISYTTNAFPGEY 356
T ++ K VVVGDG VGK+ L I + F EY
Sbjct: 4 TYLREYKLVVVGDGGVGKSALTIQLIQSHFVDEY 37
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 31.9 bits (69), Expect = 0.031
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +3
Query: 258 NMQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYI 359
N+ K V+VGDG GKT + + T F +YI
Sbjct: 6 NVPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYI 39
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 31.9 bits (69), Expect = 0.031
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +3
Query: 273 KCVVVGDGAVGKTCLLISYTTNAFPGEYI 359
K +++GD VGK+CLL+ + + + YI
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYI 38
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 31.1 bits (67), Expect = 0.054
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3
Query: 258 NMQAIKCVVVGDGAVGKTCLLISYTTNAFPGE 353
N IK ++GD ++GKT L+++Y +F E
Sbjct: 7 NNVTIKVGMIGDSSIGKTSLMVTYVQGSFDEE 38
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 29.5 bits (63), Expect = 0.16
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +3
Query: 273 KCVVVGDGAVGKTCLLISYTTNAF 344
K V++GD VGK+ LL+ +T N F
Sbjct: 12 KTVLIGDSGVGKSNLLMRFTRNEF 35
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 29.1 bits (62), Expect = 0.22
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +3
Query: 276 CVVVGDGAVGKTCLL 320
C++VGD A GKTC+L
Sbjct: 1872 CILVGDTATGKTCIL 1886
>SPBC13A2.04c |||PTR family peptide transporter|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 618
Score = 27.1 bits (57), Expect = 0.88
Identities = 8/24 (33%), Positives = 17/24 (70%)
Frame = +3
Query: 126 YTSVDCDAIVY*LLVVITICSALP 197
Y ++ C A++Y + ++I C+A+P
Sbjct: 158 YNTIVCSAVIYFIGILILTCTAIP 181
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 26.2 bits (55), Expect = 1.5
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +3
Query: 273 KCVVVGDGAVGKTCLLISYTTNAF 344
K V++GD AVGK+ L++ + + F
Sbjct: 16 KLVLLGDSAVGKSSLVLRFVKDQF 39
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 25.8 bits (54), Expect = 2.0
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +3
Query: 276 CVVVGDGAVGKTCLLISYTTN 338
C VVG + GKT LL S+ N
Sbjct: 424 CFVVGSKSCGKTALLSSFINN 444
>SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2280
Score = 25.8 bits (54), Expect = 2.0
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = -1
Query: 147 HHNQHSYKGTAQSLDNNNNFIS 82
+HN H Y+ TA+++D + F +
Sbjct: 1355 NHNIHVYRATAKNMDTDKRFFT 1376
>SPAC27E2.09 |mak2|phk1|histidine kinase Mak2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2310
Score = 25.0 bits (52), Expect = 3.5
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +3
Query: 270 IKCVVVGDGAVGKTCLLISYTTNAFPGEYI 359
++CV+ GD G CL F G++I
Sbjct: 1066 LQCVMFGDKIYGAYCLACLMAQRVFRGDHI 1095
>SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1010
Score = 24.2 bits (50), Expect = 6.2
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = -1
Query: 153 RWHHNQHSYKGTAQSLDN 100
RW H +H +GT + L++
Sbjct: 973 RWMHGKHKERGTTRKLED 990
>SPAC6G10.06 |||amino acid oxidase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 376
Score = 24.2 bits (50), Expect = 6.2
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -2
Query: 281 NTLDRLHICNSF*YFSQNKTQGMPHKTPR 195
NT+ L+IC + FS+N+ Q + TP+
Sbjct: 241 NTMGNLNICKTTEIFSKNREQLIFMGTPK 269
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 24.2 bits (50), Expect = 6.2
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +3
Query: 270 IKCVVVGDGAVGKTCLLISYTTN 338
+K V+ G GK+CLL + N
Sbjct: 10 VKIVLAGPSGTGKSCLLQRFVKN 32
>SPBC14F5.01 ||SPBC1861.10|sequence orphan|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 278
Score = 24.2 bits (50), Expect = 6.2
Identities = 9/32 (28%), Positives = 19/32 (59%)
Frame = -3
Query: 310 VLPTAPSPTTTHLIACIFVTVSDIFHKIKHKG 215
+LP T++L+ C+F+ +S++ I+ G
Sbjct: 29 ILPVMIGLKTSYLVDCVFLEISELREIIEFVG 60
>SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1147
Score = 23.8 bits (49), Expect = 8.2
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = -3
Query: 307 LPTAPSPTTTHLIACIFVTV 248
LP PSP ++H ++C +T+
Sbjct: 337 LPFTPSPRSSHTLSCSGLTL 356
>SPBP35G2.06c |nup131|Nup133a|nucleoporin Nup131|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1142
Score = 23.8 bits (49), Expect = 8.2
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -3
Query: 295 PSPTTTHLIACIFVTVSDIFHKIKHK 218
PSP T ++ C+F +FHK++ K
Sbjct: 376 PSPGT--VVFCVFDVTFAMFHKVRGK 399
>SPBC1604.15 |gpi16||pig-T |Schizosaccharomyces pombe|chr 2|||Manual
Length = 545
Score = 23.8 bits (49), Expect = 8.2
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -3
Query: 253 TVSDIFHKIKHKGCL 209
TV D+FHK+ + CL
Sbjct: 285 TVDDLFHKVPKERCL 299
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,462,377
Number of Sequences: 5004
Number of extensions: 27357
Number of successful extensions: 91
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 91
length of database: 2,362,478
effective HSP length: 65
effective length of database: 2,037,218
effective search space used: 110009772
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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