Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_L19
(360 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_1357 + 35899480-35899578,35900247-35900334,35900438-359005... 58 3e-09
02_02_0624 - 12323702-12323777,12324219-12324304,12324360-123244... 58 3e-09
02_01_0155 - 1080923-1081024,1081111-1081176,1081306-1081370,108... 58 3e-09
05_06_0061 + 25274693-25274794,25274982-25275069,25275186-252752... 56 1e-08
02_05_0708 - 31103246-31103359,31104146-31104178,31104297-311043... 56 1e-08
06_01_0907 + 7001946-7002050,7002389-7002476,7002606-7002679,700... 55 1e-08
01_01_0909 - 7163886-7163931,7164148-7164254,7164370-7164435,716... 51 3e-07
03_06_0407 - 33714563-33714636,33714966-33715152,33715943-337160... 34 0.039
07_01_0926 - 7775536-7775616,7775695-7775787,7775903-7775965,777... 33 0.051
03_06_0475 + 34193951-34194023,34195414-34195486,34195572-341956... 33 0.051
08_02_1318 - 26111031-26111276,26112139-26112427,26112936-261130... 33 0.089
10_03_0038 - 7297210-7297248,7297361-7297429,7297524-7297731,729... 32 0.16
04_04_0191 + 23468410-23468455,23468560-23468699,23469119-234692... 32 0.16
02_05_0161 + 26384079-26384086,26386173-26386226,26386376-263864... 32 0.16
02_04_0402 + 22618998-22619043,22619206-22619345,22620067-226201... 32 0.16
01_01_0565 - 4159946-4160042,4160140-4160243,4160378-4160533,416... 32 0.16
01_05_0340 - 21139885-21139978,21140169-21140272,21140379-211405... 31 0.21
05_03_0590 - 15884485-15884489,15884702-15884790,15885086-158852... 31 0.27
01_01_0893 + 7043130-7043182,7043309-7043335,7043461-7043560,704... 31 0.27
09_06_0029 + 20336634-20336881,20337737-20338208 30 0.48
06_03_1387 - 29820358-29821035 30 0.63
01_05_0673 + 24183512-24183514,24183625-24183694,24184203-241842... 29 0.83
05_07_0205 - 28402436-28402505,28402604-28402681,28402789-284029... 29 1.1
05_04_0199 + 18980017-18980759,18981478-18981532 29 1.1
03_06_0637 - 35219212-35219754,35220405-35220587 29 1.1
10_08_0165 + 15356748-15356811,15357113-15357186,15357311-153573... 29 1.5
09_02_0464 - 9591139-9591571,9592601-9592818 28 1.9
09_02_0222 + 5968232-5968467,5970811-5971187,5972216-5972256,597... 28 1.9
06_03_0414 - 20548577-20549006,20553521-20553744 28 1.9
05_07_0127 - 27872803-27873238,27873842-27874059 28 1.9
05_06_0082 - 25425050-25425479,25426551-25426783 28 1.9
05_01_0036 + 253734-253904,255216-255707 28 1.9
03_01_0326 + 2535800-2535938,2536891-2536959,2537310-2537375,253... 28 1.9
01_06_1314 + 36215607-36215734,36215911-36216043,36216135-362162... 28 1.9
01_06_0712 + 31397167-31397402,31399823-31400252 28 1.9
05_01_0037 - 256891-256998,257347-257502,257753-257824,258737-25... 28 2.5
10_06_0181 - 11532765-11533203,11536867-11537036 27 3.4
06_03_0668 + 23301578-23301791,23302102-23302199,23302233-233023... 27 3.4
03_06_0501 - 34380155-34380637,34380961-34381029,34382206-343822... 27 3.4
03_01_0647 + 4745788-4745907,4746510-4746591,4746847-4746958,474... 27 3.4
03_01_0365 - 2839190-2839251,2839637-2839694,2839946-2840032,284... 27 3.4
01_06_1343 - 36461476-36461961,36463355-36463519 27 3.4
10_08_0250 - 16179646-16179759,16180197-16180325,16180519-161806... 27 4.4
05_03_0286 - 11623575-11624063,11625098-11625262 27 4.4
09_05_0006 - 20030673-20030895,20031432-20031478,20031597-200316... 27 5.9
01_06_0959 - 33362810-33363125,33363309-33363475,33363583-333644... 27 5.9
07_03_1397 + 26269186-26269525,26269727-26269932,26270225-262703... 26 7.7
01_05_0699 - 24376987-24377154,24377259-24377406,24377530-243776... 26 7.7
>02_05_1357 +
35899480-35899578,35900247-35900334,35900438-35900592,
35900652-35900715,35902910-35902974,35903061-35903126,
35903644-35903745
Length = 212
Score = 57.6 bits (133), Expect = 3e-09
Identities = 23/30 (76%), Positives = 27/30 (90%)
Frame = +3
Query: 270 IKCVVVGDGAVGKTCLLISYTTNAFPGEYI 359
IKCV VGDGAVGKTC+LISYT+N FP +Y+
Sbjct: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYV 36
>02_02_0624 -
12323702-12323777,12324219-12324304,12324360-12324425,
12324650-12324762,12324793-12324856,12324950-12325059,
12325473-12325560,12325651-12325749
Length = 233
Score = 57.6 bits (133), Expect = 3e-09
Identities = 23/30 (76%), Positives = 27/30 (90%)
Frame = +3
Query: 270 IKCVVVGDGAVGKTCLLISYTTNAFPGEYI 359
IKCV VGDGAVGKTC+LISYT+N FP +Y+
Sbjct: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYV 36
>02_01_0155 -
1080923-1081024,1081111-1081176,1081306-1081370,
1081938-1082001,1082359-1082507,1082591-1082678,
1083757-1083855
Length = 210
Score = 57.6 bits (133), Expect = 3e-09
Identities = 23/30 (76%), Positives = 27/30 (90%)
Frame = +3
Query: 270 IKCVVVGDGAVGKTCLLISYTTNAFPGEYI 359
IKCV VGDGAVGKTC+LISYT+N FP +Y+
Sbjct: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYV 36
>05_06_0061 +
25274693-25274794,25274982-25275069,25275186-25275295,
25275542-25275605,25275713-25275777,25275864-25275929,
25276084-25276199,25276382-25276415
Length = 214
Score = 55.6 bits (128), Expect = 1e-08
Identities = 23/30 (76%), Positives = 26/30 (86%)
Frame = +3
Query: 270 IKCVVVGDGAVGKTCLLISYTTNAFPGEYI 359
IKCV VGDGAVGKTC+LI YT+N FP +YI
Sbjct: 8 IKCVTVGDGAVGKTCMLICYTSNKFPTDYI 37
>02_05_0708 -
31103246-31103359,31104146-31104178,31104297-31104362,
31104532-31104596,31105456-31105519,31105629-31105738,
31105886-31105973,31106328-31106432
Length = 214
Score = 55.6 bits (128), Expect = 1e-08
Identities = 23/30 (76%), Positives = 26/30 (86%)
Frame = +3
Query: 270 IKCVVVGDGAVGKTCLLISYTTNAFPGEYI 359
IKCV VGDGAVGKTC+LI YT+N FP +YI
Sbjct: 9 IKCVTVGDGAVGKTCMLICYTSNKFPTDYI 38
>06_01_0907 +
7001946-7002050,7002389-7002476,7002606-7002679,
7002829-7002892,7004355-7004419,7004557-7004622,
7004725-7004757,7004968-7005045,7005295-7005303
Length = 193
Score = 55.2 bits (127), Expect = 1e-08
Identities = 22/30 (73%), Positives = 26/30 (86%)
Frame = +3
Query: 270 IKCVVVGDGAVGKTCLLISYTTNAFPGEYI 359
IKCV VGDGAVGKTC+LI YT+N FP +Y+
Sbjct: 9 IKCVTVGDGAVGKTCMLICYTSNKFPTDYV 38
>01_01_0909 -
7163886-7163931,7164148-7164254,7164370-7164435,
7164720-7164784,7164937-7165000,7165685-7165794,
7165972-7166059,7166100-7166297
Length = 247
Score = 50.8 bits (116), Expect = 3e-07
Identities = 22/36 (61%), Positives = 25/36 (69%)
Frame = +3
Query: 240 ISETVTNMQAIKCVVVGDGAVGKTCLLISYTTNAFP 347
+S + IKCV VGDGAVGKTC+LI YT N FP
Sbjct: 1 MSSAAAATRFIKCVTVGDGAVGKTCMLICYTCNKFP 36
>03_06_0407 -
33714563-33714636,33714966-33715152,33715943-33716093,
33716520-33716632,33717022-33717085,33717180-33717391,
33717540-33717621,33717811-33717866,33718004-33718072,
33718524-33718772,33718873-33719049,33719556-33719702,
33719794-33719926,33720093-33720307
Length = 642
Score = 33.9 bits (74), Expect = 0.039
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +3
Query: 264 QAIKCVVVGDGAVGKTCLLISYTTNAFP 347
Q ++ VV+GD GK+ L++S T AFP
Sbjct: 14 QGVRVVVIGDPGTGKSSLVVSVATEAFP 41
>07_01_0926 -
7775536-7775616,7775695-7775787,7775903-7775965,
7776326-7776423,7776661-7776761,7776865-7776937,
7778575-7778647
Length = 193
Score = 33.5 bits (73), Expect = 0.051
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +3
Query: 270 IKCVVVGDGAVGKTCLLISYTTNAFPGEYI 359
IK +++GD VGK+CLL+ ++ +F +I
Sbjct: 16 IKLLLIGDSGVGKSCLLLRFSDGSFTTSFI 45
>03_06_0475 +
34193951-34194023,34195414-34195486,34195572-34195672,
34195912-34196009,34196326-34196388,34196534-34196626,
34196697-34196774
Length = 192
Score = 33.5 bits (73), Expect = 0.051
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +3
Query: 270 IKCVVVGDGAVGKTCLLISYTTNAFPGEYI 359
IK +++GD VGK+CLL+ ++ +F +I
Sbjct: 16 IKLLLIGDSGVGKSCLLLRFSDGSFTTSFI 45
>08_02_1318 -
26111031-26111276,26112139-26112427,26112936-26113036,
26113628-26113878,26114842-26114865,26115793-26116129
Length = 415
Score = 32.7 bits (71), Expect = 0.089
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = +3
Query: 243 SETVTNMQAIKCVVVGDGAVGKTCLLISYTTNAF 344
SE T K V++GD AVGK+ LL Y N F
Sbjct: 5 SEGETEEYLFKVVIIGDSAVGKSNLLSRYARNEF 38
>10_03_0038 -
7297210-7297248,7297361-7297429,7297524-7297731,
7297829-7297911,7298859-7298998,7299132-7299183
Length = 196
Score = 31.9 bits (69), Expect = 0.16
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 273 KCVVVGDGAVGKTCLLISYTTNAF 344
K V +GD VGK+CLL+ +T F
Sbjct: 10 KFVTIGDAGVGKSCLLLQFTDKRF 33
>04_04_0191 +
23468410-23468455,23468560-23468699,23469119-23469201,
23469346-23469550,23469632-23469735,23470290-23470449
Length = 245
Score = 31.9 bits (69), Expect = 0.16
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +3
Query: 273 KCVVVGDGAVGKTCLLISYTTNAF 344
K +++GD VGK+CLL+ +T F
Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRF 31
>02_05_0161 +
26384079-26384086,26386173-26386226,26386376-26386448,
26386775-26386822,26386906-26386953,26387990-26388061,
26388156-26388311,26388428-26388531,26388628-26388724
Length = 219
Score = 31.9 bits (69), Expect = 0.16
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +3
Query: 273 KCVVVGDGAVGKTCLLISYTTNAFPGEYI 359
K +++GD VGK+CLL+ + +++ YI
Sbjct: 26 KLLLIGDSGVGKSCLLLRFADDSYLDSYI 54
>02_04_0402 +
22618998-22619043,22619206-22619345,22620067-22620149,
22620234-22620438,22620524-22620592,22621099-22621188
Length = 210
Score = 31.9 bits (69), Expect = 0.16
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +3
Query: 273 KCVVVGDGAVGKTCLLISYTTNAF 344
K +++GD VGK+CLL+ +T F
Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRF 31
>01_01_0565 -
4159946-4160042,4160140-4160243,4160378-4160533,
4160629-4160700,4161796-4161843,4161923-4161970,
4162295-4162367,4163188-4163201
Length = 203
Score = 31.9 bits (69), Expect = 0.16
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +3
Query: 273 KCVVVGDGAVGKTCLLISYTTNAFPGEYI 359
K +++GD VGK+CLL+ + +++ YI
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYLDSYI 38
>01_05_0340 -
21139885-21139978,21140169-21140272,21140379-21140534,
21140622-21140693,21140782-21140829,21140923-21140970,
21141807-21141879,21142333-21142346
Length = 202
Score = 31.5 bits (68), Expect = 0.21
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +3
Query: 273 KCVVVGDGAVGKTCLLISYTTNAFPGEYI 359
K +++GD VGK+CLL+ + +++ YI
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYLESYI 38
>05_03_0590 -
15884485-15884489,15884702-15884790,15885086-15885251,
15885333-15885393,15886256-15886392,15887936-15888002
Length = 174
Score = 31.1 bits (67), Expect = 0.27
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 267 AIKCVVVGDGAVGKTCLLISYTTNAF 344
+ K V++GDG VGKT L++ Y + F
Sbjct: 14 SFKLVLLGDGRVGKTSLVLRYVNDVF 39
>01_01_0893 +
7043130-7043182,7043309-7043335,7043461-7043560,
7045110-7045256,7045342-7045422,7045509-7045654,
7046030-7046099
Length = 207
Score = 31.1 bits (67), Expect = 0.27
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3
Query: 270 IKCVVVGDGAVGKTCLLISYTTNAFPGEY 356
+K +++GD VGKT L+ Y F +Y
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQY 37
>09_06_0029 + 20336634-20336881,20337737-20338208
Length = 239
Score = 30.3 bits (65), Expect = 0.48
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +3
Query: 273 KCVVVGDGAVGKTCLLISYTTNAF 344
K VVVGD AVGKT LL +T + F
Sbjct: 24 KVVVVGDSAVGKTQLLGRFTKDEF 47
>06_03_1387 - 29820358-29821035
Length = 225
Score = 29.9 bits (64), Expect = 0.63
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +3
Query: 273 KCVVVGDGAVGKTCLLISYTTNAF 344
K VV+GD AVGKT LL +T + F
Sbjct: 9 KVVVIGDSAVGKTQLLGRFTKDEF 32
>01_05_0673 +
24183512-24183514,24183625-24183694,24184203-24184259,
24184348-24184465,24185044-24185133,24185209-24185388,
24185474-24185551,24185642-24185711
Length = 221
Score = 29.5 bits (63), Expect = 0.83
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +3
Query: 243 SETVTNMQAIKCVVVGDGAVGKTCLLISYTTNAFPGEY 356
++ + + K V+VGDG GKT + + T F +Y
Sbjct: 5 NQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKY 42
>05_07_0205 -
28402436-28402505,28402604-28402681,28402789-28402968,
28403051-28403140,28403258-28403375,28403461-28403517,
28404155-28404224,28404317-28404319
Length = 221
Score = 29.1 bits (62), Expect = 1.1
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 267 AIKCVVVGDGAVGKTCLLISYTTNAFPGEY 356
+ K V+VGDG GKT + + T F +Y
Sbjct: 13 SFKLVIVGDGGTGKTTFVKRHLTGEFEKKY 42
>05_04_0199 + 18980017-18980759,18981478-18981532
Length = 265
Score = 29.1 bits (62), Expect = 1.1
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +3
Query: 183 CSALPRRFVRHPLCFIL*KISETVTNMQAIKCVVVGDGA 299
CS LPRR R+P C L K E +Q + V G G+
Sbjct: 135 CSRLPRRRCRNPRCRGLVKALEFDVQLQTEEAVRAGTGS 173
>03_06_0637 - 35219212-35219754,35220405-35220587
Length = 241
Score = 29.1 bits (62), Expect = 1.1
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +3
Query: 273 KCVVVGDGAVGKTCLLISYTTNAF 344
K V++GD VGK+ LL +T N+F
Sbjct: 20 KIVLIGDSGVGKSNLLSRFTRNSF 43
>10_08_0165 +
15356748-15356811,15357113-15357186,15357311-15357394,
15357508-15357602,15357737-15357790,15357791-15357896,
15358236-15358277,15358585-15358674,15358788-15358984,
15359355-15359413,15360166-15362252
Length = 983
Score = 28.7 bits (61), Expect = 1.5
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = +3
Query: 270 IKCVVVGDGAVGKTCLLISYTTNAF 344
+K V++GD VGK+C+++ + F
Sbjct: 45 VKLVLLGDSGVGKSCIVLRFVRGQF 69
>09_02_0464 - 9591139-9591571,9592601-9592818
Length = 216
Score = 28.3 bits (60), Expect = 1.9
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 273 KCVVVGDGAVGKTCLLISYTTNAF 344
K V++GD VGK+ LL +T N F
Sbjct: 14 KVVLIGDSGVGKSNLLSRFTRNEF 37
>09_02_0222 +
5968232-5968467,5970811-5971187,5972216-5972256,
5972808-5972843
Length = 229
Score = 28.3 bits (60), Expect = 1.9
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 273 KCVVVGDGAVGKTCLLISYTTNAF 344
K V++GD AVGK+ LL + N F
Sbjct: 20 KVVLIGDSAVGKSQLLARFARNEF 43
>06_03_0414 - 20548577-20549006,20553521-20553744
Length = 217
Score = 28.3 bits (60), Expect = 1.9
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 273 KCVVVGDGAVGKTCLLISYTTNAF 344
K V++GD VGK+ LL +T N F
Sbjct: 16 KVVLIGDSGVGKSNLLSRFTRNEF 39
>05_07_0127 - 27872803-27873238,27873842-27874059
Length = 217
Score = 28.3 bits (60), Expect = 1.9
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 273 KCVVVGDGAVGKTCLLISYTTNAF 344
K V++GD VGK+ LL +T N F
Sbjct: 14 KVVLIGDSGVGKSNLLSRFTRNEF 37
>05_06_0082 - 25425050-25425479,25426551-25426783
Length = 220
Score = 28.3 bits (60), Expect = 1.9
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 273 KCVVVGDGAVGKTCLLISYTTNAF 344
K V++GD VGK+ LL +T N F
Sbjct: 19 KVVLIGDSGVGKSNLLSRFTKNEF 42
>05_01_0036 + 253734-253904,255216-255707
Length = 220
Score = 28.3 bits (60), Expect = 1.9
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 273 KCVVVGDGAVGKTCLLISYTTNAF 344
K V++GD VGK+ LL +T N F
Sbjct: 16 KVVLIGDSGVGKSNLLSRFTRNEF 39
>03_01_0326 +
2535800-2535938,2536891-2536959,2537310-2537375,
2537979-2538100,2538501-2538629,2540462-2540569
Length = 210
Score = 28.3 bits (60), Expect = 1.9
Identities = 10/23 (43%), Positives = 18/23 (78%)
Frame = +3
Query: 267 AIKCVVVGDGAVGKTCLLISYTT 335
+ K +++GD AVGK+ LL+S+ +
Sbjct: 12 SFKILLIGDSAVGKSSLLVSFVS 34
>01_06_1314 +
36215607-36215734,36215911-36216043,36216135-36216281,
36217172-36217348,36217469-36217717,36217917-36217964,
36218364-36218419,36218639-36218720,36219260-36219515,
36219563-36219629,36219688-36219724,36219918-36220030,
36220838-36220988,36221352-36221538,36221768-36221841
Length = 634
Score = 28.3 bits (60), Expect = 1.9
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +3
Query: 264 QAIKCVVVGDGAVGKTCLLISYTTNA 341
Q+++ VV+GD GK+ L++S T A
Sbjct: 14 QSLRVVVIGDPGTGKSSLVVSAATEA 39
>01_06_0712 + 31397167-31397402,31399823-31400252
Length = 221
Score = 28.3 bits (60), Expect = 1.9
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 273 KCVVVGDGAVGKTCLLISYTTNAF 344
K V++GD VGK+ LL +T N F
Sbjct: 20 KTVLIGDSGVGKSNLLSRFTKNEF 43
>05_01_0037 -
256891-256998,257347-257502,257753-257824,258737-258784,
259071-259143,259237-259250
Length = 156
Score = 27.9 bits (59), Expect = 2.5
Identities = 9/19 (47%), Positives = 16/19 (84%)
Frame = +3
Query: 273 KCVVVGDGAVGKTCLLISY 329
K +++GD +VGK+CLL+ +
Sbjct: 10 KLLLIGDSSVGKSCLLLRF 28
>10_06_0181 - 11532765-11533203,11536867-11537036
Length = 202
Score = 27.5 bits (58), Expect = 3.4
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 273 KCVVVGDGAVGKTCLLISYTTNAF 344
K V++GD AVGK+ +L + N F
Sbjct: 12 KVVLIGDSAVGKSQILARFARNEF 35
>06_03_0668 +
23301578-23301791,23302102-23302199,23302233-23302301,
23302674-23302961,23303045-23303208,23303344-23303599,
23303706-23303816,23304109-23304195,23305916-23305985,
23306093-23306149,23306309-23306426,23307314-23307403,
23307492-23307671,23307816-23307893,23308016-23308088
Length = 650
Score = 27.5 bits (58), Expect = 3.4
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +3
Query: 267 AIKCVVVGDGAVGKTCLLISYTTNAFPGEY 356
+ K ++VGDG GKT + + T F Y
Sbjct: 441 SFKLILVGDGGTGKTTFVKRHITGEFEKRY 470
>03_06_0501 -
34380155-34380637,34380961-34381029,34382206-34382229,
34382622-34382786
Length = 246
Score = 27.5 bits (58), Expect = 3.4
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 273 KCVVVGDGAVGKTCLLISYTTNAF 344
K V++GD VGK+ +L +T N F
Sbjct: 14 KIVLIGDSGVGKSNILSRFTRNEF 37
>03_01_0647 +
4745788-4745907,4746510-4746591,4746847-4746958,
4747607-4747697,4747805-4747969
Length = 189
Score = 27.5 bits (58), Expect = 3.4
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +3
Query: 240 ISETVTNMQAIKCVVVGDGAVGKTCLLISYTTNAFPGEY 356
++ V+ + K V +GD AVGKT ++ + + F Y
Sbjct: 1 MAPVVSALAKYKLVFLGDQAVGKTAIITRFMYDKFDATY 39
>03_01_0365 -
2839190-2839251,2839637-2839694,2839946-2840032,
2840117-2840206,2840575-2840650,2840877-2840971,
2841090-2841173,2841270-2841343,2841803-2841827
Length = 216
Score = 27.5 bits (58), Expect = 3.4
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +3
Query: 273 KCVVVGDGAVGKTCLLISYTTNAF 344
K V++GD VGK+C+++ + F
Sbjct: 33 KLVLLGDSGVGKSCIVLRFVRGQF 56
>01_06_1343 - 36461476-36461961,36463355-36463519
Length = 216
Score = 27.5 bits (58), Expect = 3.4
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 273 KCVVVGDGAVGKTCLLISYTTNAF 344
K V++GD VGK+ +L +T N F
Sbjct: 14 KIVLIGDSGVGKSNILSRFTRNEF 37
>10_08_0250 -
16179646-16179759,16180197-16180325,16180519-16180640,
16181073-16181138,16182202-16182270,16182989-16183157
Length = 222
Score = 27.1 bits (57), Expect = 4.4
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +3
Query: 267 AIKCVVVGDGAVGKTCLLISYTTNA 341
+ K +++GD VGK+ LL+S+ A
Sbjct: 19 SFKILLIGDSGVGKSSLLVSFVVAA 43
>05_03_0286 - 11623575-11624063,11625098-11625262
Length = 217
Score = 27.1 bits (57), Expect = 4.4
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 273 KCVVVGDGAVGKTCLLISYTTNAF 344
K V++GD VGK+ +L +T N F
Sbjct: 14 KMVLIGDSGVGKSNILSRFTRNHF 37
>09_05_0006 -
20030673-20030895,20031432-20031478,20031597-20031665,
20032590-20032725,20032900-20033067,20034286-20034354,
20034535-20034631,20034742-20034820,20035702-20035872
Length = 352
Score = 26.6 bits (56), Expect = 5.9
Identities = 8/45 (17%), Positives = 29/45 (64%)
Frame = -3
Query: 277 HLIACIFVTVSDIFHKIKHKGCLTKRLGNALQIVITTSNQYTMAS 143
H +C+ + S++FH + + L + + + ++ ++++++Q+ +A+
Sbjct: 104 HKKSCVVFSESNLFHFLVERCALARGISSIIRSLLSSNDQWCIAN 148
>01_06_0959 -
33362810-33363125,33363309-33363475,33363583-33364410,
33364483-33364719,33365455-33365871,33365951-33366412,
33367197-33367382
Length = 870
Score = 26.6 bits (56), Expect = 5.9
Identities = 11/46 (23%), Positives = 26/46 (56%)
Frame = -1
Query: 210 SQNASATHYKL*SPLAINTRWHHNQHSYKGTAQSLDNNNNFISLHW 73
S + +H+ SP +T +H+N+++ + ++D++ N + HW
Sbjct: 451 SSSRGTSHFFAISPYCGSTSFHYNENNLAENSYAVDSSVNH-TAHW 495
>07_03_1397 +
26269186-26269525,26269727-26269932,26270225-26270327,
26270570-26270577
Length = 218
Score = 26.2 bits (55), Expect = 7.7
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 273 KCVVVGDGAVGKTCLLISYTTNAF 344
K V++GD +VGK+ LL + N F
Sbjct: 16 KIVLLGDSSVGKSNLLARFARNEF 39
>01_05_0699 -
24376987-24377154,24377259-24377406,24377530-24377645,
24377743-24377925,24377998-24378186,24378273-24378497,
24378514-24378759,24378836-24378983,24379126-24379241,
24379441-24379497,24379735-24379923,24380001-24380150,
24380323-24380404,24380484-24380601,24380713-24380899,
24381044-24381138,24381223-24381277,24381376-24381567,
24381657-24381853,24382534-24382684
Length = 1003
Score = 26.2 bits (55), Expect = 7.7
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -1
Query: 150 WHHNQHSYKGTAQSLDNNNNFISLHWR*E*VHMNYSFCSTQKR 22
+ H + G A L N F+SL W+ E VH FC +KR
Sbjct: 236 YDHGNRGFPGWA--LRNYIAFVSLRWKIEKVHF---FCYREKR 273
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,981,278
Number of Sequences: 37544
Number of extensions: 162720
Number of successful extensions: 447
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 447
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 554421256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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