Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_L16
         (541 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X53959-1|CAA37910.1| 1480|Drosophila melanogaster slit protein p...    29   5.4  
AF126540-1|AAD26567.1| 1504|Drosophila melanogaster slit protein...    29   5.4  
AE013599-2126|AAF58097.1| 1504|Drosophila melanogaster CG8355-PC...    29   5.4  
AE013599-2125|AAF58098.1| 1480|Drosophila melanogaster CG8355-PA...    29   5.4  
AE013599-2124|AAM70966.1| 1469|Drosophila melanogaster CG8355-PB...    29   5.4  
AY122091-1|AAM52603.1|   93|Drosophila melanogaster GH04518p pro...    28   7.1  

>X53959-1|CAA37910.1| 1480|Drosophila melanogaster slit protein
           protein.
          Length = 1480

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +1

Query: 145 ISHISNRTSLSQYNIKTNRYFDNNINCI 228
           I  ISN+  L  + +KT   +DN I+C+
Sbjct: 607 IKEISNKMFLGLHQLKTLNLYDNQISCV 634


>AF126540-1|AAD26567.1| 1504|Drosophila melanogaster slit protein
           protein.
          Length = 1504

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +1

Query: 145 ISHISNRTSLSQYNIKTNRYFDNNINCI 228
           I  ISN+  L  + +KT   +DN I+C+
Sbjct: 631 IKEISNKMFLGLHQLKTLNLYDNQISCV 658


>AE013599-2126|AAF58097.1| 1504|Drosophila melanogaster CG8355-PC,
           isoform C protein.
          Length = 1504

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +1

Query: 145 ISHISNRTSLSQYNIKTNRYFDNNINCI 228
           I  ISN+  L  + +KT   +DN I+C+
Sbjct: 631 IKEISNKMFLGLHQLKTLNLYDNQISCV 658


>AE013599-2125|AAF58098.1| 1480|Drosophila melanogaster CG8355-PA,
           isoform A protein.
          Length = 1480

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +1

Query: 145 ISHISNRTSLSQYNIKTNRYFDNNINCI 228
           I  ISN+  L  + +KT   +DN I+C+
Sbjct: 607 IKEISNKMFLGLHQLKTLNLYDNQISCV 634


>AE013599-2124|AAM70966.1| 1469|Drosophila melanogaster CG8355-PB,
           isoform B protein.
          Length = 1469

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +1

Query: 145 ISHISNRTSLSQYNIKTNRYFDNNINCI 228
           I  ISN+  L  + +KT   +DN I+C+
Sbjct: 607 IKEISNKMFLGLHQLKTLNLYDNQISCV 634


>AY122091-1|AAM52603.1|   93|Drosophila melanogaster GH04518p
           protein.
          Length = 93

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = +1

Query: 187 IKTNRYFDNNINCICLYFIYYV 252
           I++N+ FD+ I  +CL+ +Y V
Sbjct: 27  IQSNKRFDSQIKIVCLFLVYLV 48


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,735,278
Number of Sequences: 53049
Number of extensions: 299896
Number of successful extensions: 642
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 642
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2053700352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)