Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_L09
(157 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicas... 40 3e-06
AM292365-1|CAL23177.1| 313|Tribolium castaneum gustatory recept... 20 2.6
AM292325-1|CAL23137.2| 309|Tribolium castaneum gustatory recept... 20 2.6
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 19 3.4
AJ457831-1|CAD29886.1| 249|Tribolium castaneum helix-loop-helix... 19 3.4
EF125544-1|ABL73928.1| 279|Tribolium castaneum obstractor B pro... 19 4.5
DQ138190-1|ABA03054.1| 135|Tribolium castaneum bursicon-like pr... 19 5.9
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 19 5.9
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 19 5.9
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 19 5.9
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 19 5.9
EF592178-1|ABQ95974.1| 532|Tribolium castaneum tyrosine hydroxy... 18 7.9
>AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicase
protein.
Length = 580
Score = 39.5 bits (88), Expect = 3e-06
Identities = 17/25 (68%), Positives = 20/25 (80%)
Frame = +1
Query: 82 QHLAGRILNNYLFVAVGIVGGASTD 156
Q LAG+ L NY+F+AVGIVG A TD
Sbjct: 359 QQLAGKFLLNYIFIAVGIVGSACTD 383
Score = 37.1 bits (82), Expect = 2e-05
Identities = 15/23 (65%), Positives = 20/23 (86%)
Frame = +3
Query: 36 KRQTLMFSATFPEDIATLSGTYL 104
+RQTLMFSATFPE++ L+G +L
Sbjct: 344 ERQTLMFSATFPEEVQQLAGKFL 366
>AM292365-1|CAL23177.1| 313|Tribolium castaneum gustatory receptor
candidate 44 protein.
Length = 313
Score = 19.8 bits (39), Expect = 2.6
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +1
Query: 100 ILNNYLFVAVG 132
ILNNYL + +G
Sbjct: 185 ILNNYLTIVLG 195
>AM292325-1|CAL23137.2| 309|Tribolium castaneum gustatory receptor
candidate 4 protein.
Length = 309
Score = 19.8 bits (39), Expect = 2.6
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +1
Query: 100 ILNNYLFVAVG 132
ILNNYL + +G
Sbjct: 181 ILNNYLTIVLG 191
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 19.4 bits (38), Expect = 3.4
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = -2
Query: 147 CSTDDADRYEQVIVQD 100
C T D Y+ I+QD
Sbjct: 105 CKTCPGDLYDSDIIQD 120
>AJ457831-1|CAD29886.1| 249|Tribolium castaneum helix-loop-helix
transcription factor protein.
Length = 249
Score = 19.4 bits (38), Expect = 3.4
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +1
Query: 58 PLLSRRI*QHLA 93
P++ RR+ QHLA
Sbjct: 129 PVVKRRLLQHLA 140
>EF125544-1|ABL73928.1| 279|Tribolium castaneum obstractor B
protein.
Length = 279
Score = 19.0 bits (37), Expect = 4.5
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +2
Query: 26 TH*QTSDPDVFRYF 67
TH + +DPD +YF
Sbjct: 182 THPRYADPDDCQYF 195
>DQ138190-1|ABA03054.1| 135|Tribolium castaneum bursicon-like
protein protein.
Length = 135
Score = 18.6 bits (36), Expect = 5.9
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = -3
Query: 89 KCCYILRESSGKHQGLTFVNGY 24
K CY RES + + +T + Y
Sbjct: 79 KECYCCRESFLRERTITLTHCY 100
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 18.6 bits (36), Expect = 5.9
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = -1
Query: 106 SRYVPLSVAISSGKVAENI 50
SR+ P+ GK+ EN+
Sbjct: 273 SRHSPIPFIKKLGKIKENL 291
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 18.6 bits (36), Expect = 5.9
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = -1
Query: 106 SRYVPLSVAISSGKVAENI 50
SR+ P+ GK+ EN+
Sbjct: 273 SRHSPIPFIKKLGKIKENL 291
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 18.6 bits (36), Expect = 5.9
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = -1
Query: 106 SRYVPLSVAISSGKVAENI 50
SR+ P+ GK+ EN+
Sbjct: 273 SRHSPIPFIKKLGKIKENL 291
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 18.6 bits (36), Expect = 5.9
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = -1
Query: 106 SRYVPLSVAISSGKVAENI 50
SR+ P+ GK+ EN+
Sbjct: 273 SRHSPIPFIKKLGKIKENL 291
>EF592178-1|ABQ95974.1| 532|Tribolium castaneum tyrosine
hydroxylase protein.
Length = 532
Score = 18.2 bits (35), Expect = 7.9
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = +2
Query: 11 IRHEGTH*QTSDPD 52
+RH+ T T +PD
Sbjct: 344 VRHKNTPYHTPEPD 357
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,398
Number of Sequences: 336
Number of extensions: 574
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 32
effective length of database: 111,833
effective search space used: 2124827
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)
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