Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_L09
         (157 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    36   1e-04
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    25   0.32 
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    23   0.97 
U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    22   3.0  
AY341201-1|AAR13765.1|  154|Anopheles gambiae NOS protein.             20   9.0  
AY341200-1|AAR13764.1|  154|Anopheles gambiae NOS protein.             20   9.0  
AY341199-1|AAR13763.1|  154|Anopheles gambiae NOS protein.             20   9.0  
AY341198-1|AAR13762.1|  154|Anopheles gambiae NOS protein.             20   9.0  
AY341197-1|AAR13761.1|  154|Anopheles gambiae NOS protein.             20   9.0  
AY341196-1|AAR13760.1|  154|Anopheles gambiae NOS protein.             20   9.0  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 36.3 bits (80), Expect = 1e-04
 Identities = 16/25 (64%), Positives = 19/25 (76%)
 Frame = +1

Query: 82  QHLAGRILNNYLFVAVGIVGGASTD 156
           Q LAG+ L+NY+ V VGIVGGA  D
Sbjct: 373 QELAGKFLHNYICVFVGIVGGACAD 397



 Score = 35.5 bits (78), Expect = 2e-04
 Identities = 15/27 (55%), Positives = 20/27 (74%)
 Frame = +3

Query: 36  KRQTLMFSATFPEDIATLSGTYLEQLL 116
           +RQTLMFSATFP +I  L+G +L   +
Sbjct: 358 QRQTLMFSATFPAEIQELAGKFLHNYI 384


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 25.0 bits (52), Expect = 0.32
 Identities = 19/50 (38%), Positives = 27/50 (54%)
 Frame = -1

Query: 157 RLYLLHRRCRPLRTSNCSRYVPLSVAISSGKVAENIRV*RLSMGTLVPNS 8
           RL LL +  +P   S  S Y PLS+  + GKV E + + RL+     P+S
Sbjct: 487 RLVLLSKTGKPPGES--SSYRPLSMLDALGKVLEQLILNRLNKHLEDPDS 534


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 23.4 bits (48), Expect = 0.97
 Identities = 18/50 (36%), Positives = 27/50 (54%)
 Frame = -1

Query: 157 RLYLLHRRCRPLRTSNCSRYVPLSVAISSGKVAENIRV*RLSMGTLVPNS 8
           RL LL ++ +P   S  S Y PL +  + GKV E + + RL+     P+S
Sbjct: 533 RLVLLPKQGKPPGES--SSYRPLCMLDALGKVLERLILNRLNEHLEEPSS 580


>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 136 RCRPLRTSNCS 104
           RC P RT++CS
Sbjct: 77  RCAPARTASCS 87


>AY341201-1|AAR13765.1|  154|Anopheles gambiae NOS protein.
          Length = 154

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 42  DVCQWVPSCRIPAA 1
           +V +  PSCR PAA
Sbjct: 108 EVLEEFPSCRPPAA 121


>AY341200-1|AAR13764.1|  154|Anopheles gambiae NOS protein.
          Length = 154

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 42  DVCQWVPSCRIPAA 1
           +V +  PSCR PAA
Sbjct: 108 EVLEEFPSCRPPAA 121


>AY341199-1|AAR13763.1|  154|Anopheles gambiae NOS protein.
          Length = 154

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 42  DVCQWVPSCRIPAA 1
           +V +  PSCR PAA
Sbjct: 108 EVLEEFPSCRPPAA 121


>AY341198-1|AAR13762.1|  154|Anopheles gambiae NOS protein.
          Length = 154

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 42  DVCQWVPSCRIPAA 1
           +V +  PSCR PAA
Sbjct: 108 EVLEEFPSCRPPAA 121


>AY341197-1|AAR13761.1|  154|Anopheles gambiae NOS protein.
          Length = 154

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 42  DVCQWVPSCRIPAA 1
           +V +  PSCR PAA
Sbjct: 108 EVLEEFPSCRPPAA 121


>AY341196-1|AAR13760.1|  154|Anopheles gambiae NOS protein.
          Length = 154

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 42  DVCQWVPSCRIPAA 1
           +V +  PSCR PAA
Sbjct: 108 EVLEEFPSCRPPAA 121


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,548
Number of Sequences: 2352
Number of extensions: 2657
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 31
effective length of database: 491,067
effective search space used:  9821340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)