Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_L08
(313 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M95549-1|AAA36608.1| 672|Homo sapiens sodium/glucose cotranspor... 29 2.9
AF307340-1|AAL66409.1| 698|Homo sapiens sodium/glucose cotransp... 29 2.9
Z83849-1|CAI23589.1| 664|Homo sapiens solute carrier family 5 (... 29 3.8
Z83839-4|CAB06087.1| 664|Homo sapiens solute carrier family 5 (... 29 3.8
Z80998-1|CAI18759.1| 664|Homo sapiens solute carrier family 5 (... 29 3.8
Z74021-2|CAI18756.1| 664|Homo sapiens solute carrier family 5 (... 29 3.8
M24847-1|AAA60320.1| 664|Homo sapiens SGLT1 protein. 29 3.8
L29339-1|AAB59448.1| 664|Homo sapiens Na+/glucose cotransporter... 29 3.8
CR456579-1|CAG30465.1| 664|Homo sapiens SLC5A1 protein. 29 3.8
BC139839-1|AAI39840.2| 669|Homo sapiens SLC5A1 protein protein. 29 3.8
BC038294-1|AAH38294.1| 303|Homo sapiens C10orf46 protein protein. 29 3.8
AY743663-1|AAU89709.1| 306|Homo sapiens cullin protein. 29 3.8
AL022321-1|CAI19810.1| 664|Homo sapiens solute carrier family 5... 29 3.8
AJ544771-1|CAD67614.1| 369|Homo sapiens hypothetical protein pr... 29 3.8
AY682086-1|AAT85835.1| 539|Homo sapiens voltage-gated sodium ch... 28 5.0
AY682084-1|AAT85833.1| 528|Homo sapiens voltage-gated sodium ch... 28 5.0
M94055-1|AAA18895.1| 2005|Homo sapiens voltage-gated sodium chan... 27 8.8
BC027935-1|AAH27935.1| 355|Homo sapiens chromosome 19 open read... 27 8.8
BC023623-1|AAH23623.1| 281|Homo sapiens C19orf47 protein protein. 27 8.8
AY043484-1|AAK95360.1| 1998|Homo sapiens voltage-gated sodium ch... 27 8.8
AK094207-1|BAC04311.1| 422|Homo sapiens protein ( Homo sapiens ... 27 8.8
AF327246-2|AAG53413.1| 2005|Homo sapiens voltage-gated sodium ch... 27 8.8
AF225985-1|AAK00217.1| 1999|Homo sapiens voltage-gated sodium ch... 27 8.8
AC011303-1|AAY14971.1| 2005|Homo sapiens unknown protein. 27 8.8
AC010127-1|AAX81984.1| 1998|Homo sapiens unknown protein. 27 8.8
AB208888-1|BAD92125.1| 1315|Homo sapiens Sodium channel protein ... 27 8.8
AB098335-1|BAC45228.1| 1981|Homo sapiens Voltage-gated sodium ch... 27 8.8
AB093549-1|BAC21102.1| 1998|Homo sapiens Voltage-gated sodium ch... 27 8.8
AB093548-1|BAC21101.1| 2009|Homo sapiens voltage-gated sodium ch... 27 8.8
>M95549-1|AAA36608.1| 672|Homo sapiens sodium/glucose
cotransporter-like protein protein.
Length = 672
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -2
Query: 243 VCGAHILIFAVLLFSLF-VVTERLDLGTIAAARTHETRSIIKLR 115
+CG H L FA++LF ++T + L T R H R + LR
Sbjct: 521 LCGVHYLYFAIVLFFCSGLLTLTVSLCTAPIPRKHLHRLVFSLR 564
>AF307340-1|AAL66409.1| 698|Homo sapiens sodium/glucose
cotransporter protein.
Length = 698
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -2
Query: 243 VCGAHILIFAVLLFSLF-VVTERLDLGTIAAARTHETRSIIKLR 115
+CG H L FA++LF ++T + L T R H R + LR
Sbjct: 521 LCGVHYLYFAIVLFFCSGLLTLTVSLCTAPIPRKHLHRLVFSLR 564
>Z83849-1|CAI23589.1| 664|Homo sapiens solute carrier family 5
(sodium/glucose cotransporter), member 1 protein.
Length = 664
Score = 28.7 bits (61), Expect = 3.8
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -2
Query: 243 VCGAHILIFAVLLFSLFVVT 184
+CG H L FA++LF++ +T
Sbjct: 521 ICGVHYLYFAIILFAISFIT 540
>Z83839-4|CAB06087.1| 664|Homo sapiens solute carrier family 5
(sodium/glucose cotransporter), member 1 protein.
Length = 664
Score = 28.7 bits (61), Expect = 3.8
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -2
Query: 243 VCGAHILIFAVLLFSLFVVT 184
+CG H L FA++LF++ +T
Sbjct: 521 ICGVHYLYFAIILFAISFIT 540
>Z80998-1|CAI18759.1| 664|Homo sapiens solute carrier family 5
(sodium/glucose cotransporter), member 1 protein.
Length = 664
Score = 28.7 bits (61), Expect = 3.8
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -2
Query: 243 VCGAHILIFAVLLFSLFVVT 184
+CG H L FA++LF++ +T
Sbjct: 521 ICGVHYLYFAIILFAISFIT 540
>Z74021-2|CAI18756.1| 664|Homo sapiens solute carrier family 5
(sodium/glucose cotransporter), member 1 protein.
Length = 664
Score = 28.7 bits (61), Expect = 3.8
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -2
Query: 243 VCGAHILIFAVLLFSLFVVT 184
+CG H L FA++LF++ +T
Sbjct: 521 ICGVHYLYFAIILFAISFIT 540
>M24847-1|AAA60320.1| 664|Homo sapiens SGLT1 protein.
Length = 664
Score = 28.7 bits (61), Expect = 3.8
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -2
Query: 243 VCGAHILIFAVLLFSLFVVT 184
+CG H L FA++LF++ +T
Sbjct: 521 ICGVHYLYFAIILFAISFIT 540
>L29339-1|AAB59448.1| 664|Homo sapiens Na+/glucose cotransporter
protein.
Length = 664
Score = 28.7 bits (61), Expect = 3.8
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -2
Query: 243 VCGAHILIFAVLLFSLFVVT 184
+CG H L FA++LF++ +T
Sbjct: 521 ICGVHYLYFAIILFAISFIT 540
>CR456579-1|CAG30465.1| 664|Homo sapiens SLC5A1 protein.
Length = 664
Score = 28.7 bits (61), Expect = 3.8
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -2
Query: 243 VCGAHILIFAVLLFSLFVVT 184
+CG H L FA++LF++ +T
Sbjct: 521 ICGVHYLYFAIILFAISFIT 540
>BC139839-1|AAI39840.2| 669|Homo sapiens SLC5A1 protein protein.
Length = 669
Score = 28.7 bits (61), Expect = 3.8
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -2
Query: 243 VCGAHILIFAVLLFSLFVVT 184
+CG H L FA++LF++ +T
Sbjct: 521 ICGVHYLYFAIILFAISFIT 540
>BC038294-1|AAH38294.1| 303|Homo sapiens C10orf46 protein protein.
Length = 303
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +2
Query: 83 LPAAPQPAIMNRSLIILLVSCVLAAAMVPRSRRSVTTNNENSSTANIK 226
LP PQP +I++L SC AAA+ + ++ N +T+ K
Sbjct: 74 LPMGPQPPPEANGVIMMLKSCDAAAAVAKAAPAPTASSTININTSTSK 121
>AY743663-1|AAU89709.1| 306|Homo sapiens cullin protein.
Length = 306
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +2
Query: 83 LPAAPQPAIMNRSLIILLVSCVLAAAMVPRSRRSVTTNNENSSTANIK 226
LP PQP +I++L SC AAA+ + ++ N +T+ K
Sbjct: 74 LPMGPQPPPEANGVIMMLKSCDAAAAVAKAAPAPTASSTININTSTSK 121
>AL022321-1|CAI19810.1| 664|Homo sapiens solute carrier family 5
(sodium/glucose cotransporter), member 1 protein.
Length = 664
Score = 28.7 bits (61), Expect = 3.8
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -2
Query: 243 VCGAHILIFAVLLFSLFVVT 184
+CG H L FA++LF++ +T
Sbjct: 521 ICGVHYLYFAIILFAISFIT 540
>AJ544771-1|CAD67614.1| 369|Homo sapiens hypothetical protein
protein.
Length = 369
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +2
Query: 83 LPAAPQPAIMNRSLIILLVSCVLAAAMVPRSRRSVTTNNENSSTANIK 226
LP PQP +I++L SC AAA+ + ++ N +T+ K
Sbjct: 74 LPMGPQPPPEANGVIMMLKSCDAAAAVAKAAPAPTASSTININTSTSK 121
>AY682086-1|AAT85835.1| 539|Homo sapiens voltage-gated sodium
channel Nav1.7 protein.
Length = 539
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -2
Query: 225 LIFAVLLFSLFVVTERLDLGTIAAARTHETRSIIKLRFIIAG 100
L F V++F+ VTE +DLG ++A RT +K +I G
Sbjct: 56 LDFVVIVFAY--VTEFVDLGNVSALRTFRVLRALKTISVIPG 95
>AY682084-1|AAT85833.1| 528|Homo sapiens voltage-gated sodium
channel Nav1.7 protein.
Length = 528
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -2
Query: 225 LIFAVLLFSLFVVTERLDLGTIAAARTHETRSIIKLRFIIAG 100
L F V++F+ VTE +DLG ++A RT +K +I G
Sbjct: 56 LDFVVIVFAY--VTEFVDLGNVSALRTFRVLRALKTISVIPG 95
>M94055-1|AAA18895.1| 2005|Homo sapiens voltage-gated sodium channel
protein.
Length = 2005
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = -2
Query: 225 LIFAVLLFSLFVVTERLDLGTIAAARTHETRSIIKLRFIIAG 100
L F V+ F+ VTE +DLG ++A RT +K +I G
Sbjct: 194 LDFTVITFAY--VTEFVDLGNVSALRTFRVLRALKTISVIPG 233
>BC027935-1|AAH27935.1| 355|Homo sapiens chromosome 19 open reading
frame 47 protein.
Length = 355
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +2
Query: 152 AAAMVPRSRRSVTTNNENSSTANIKICAPQT 244
AAA+VP ++ S T+ ++ S+A +K+ +T
Sbjct: 291 AAALVPEAQDSQVTSTKSKSSAEVKVTIKRT 321
>BC023623-1|AAH23623.1| 281|Homo sapiens C19orf47 protein protein.
Length = 281
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +2
Query: 152 AAAMVPRSRRSVTTNNENSSTANIKICAPQT 244
AAA+VP ++ S T+ ++ S+A +K+ +T
Sbjct: 217 AAALVPEAQDSQVTSTKSKSSAEVKVTIKRT 247
>AY043484-1|AAK95360.1| 1998|Homo sapiens voltage-gated sodium
channel type I protein.
Length = 1998
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = -2
Query: 225 LIFAVLLFSLFVVTERLDLGTIAAARTHETRSIIKLRFIIAG 100
L F V+ F+ VTE +DLG ++A RT +K +I G
Sbjct: 193 LDFTVITFAY--VTEFVDLGNVSALRTFRVLRALKTISVIPG 232
>AK094207-1|BAC04311.1| 422|Homo sapiens protein ( Homo sapiens
cDNA FLJ36888 fis, clone BNGH42008850. ).
Length = 422
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +2
Query: 152 AAAMVPRSRRSVTTNNENSSTANIKICAPQT 244
AAA+VP ++ S T+ ++ S+A +K+ +T
Sbjct: 358 AAALVPEAQDSQVTSTKSKSSAEVKVTIKRT 388
>AF327246-2|AAG53413.1| 2005|Homo sapiens voltage-gated sodium
channel type II alpha subunit protein.
Length = 2005
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = -2
Query: 225 LIFAVLLFSLFVVTERLDLGTIAAARTHETRSIIKLRFIIAG 100
L F V+ F+ VTE +DLG ++A RT +K +I G
Sbjct: 194 LDFTVITFAY--VTEFVDLGNVSALRTFRVLRALKTISVIPG 233
>AF225985-1|AAK00217.1| 1999|Homo sapiens voltage-gated sodium
channel alpha subunit SCN1A protein.
Length = 1999
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = -2
Query: 225 LIFAVLLFSLFVVTERLDLGTIAAARTHETRSIIKLRFIIAG 100
L F V+ F+ VTE +DLG ++A RT +K +I G
Sbjct: 193 LDFTVITFAY--VTEFVDLGNVSALRTFRVLRALKTISVIPG 232
>AC011303-1|AAY14971.1| 2005|Homo sapiens unknown protein.
Length = 2005
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = -2
Query: 225 LIFAVLLFSLFVVTERLDLGTIAAARTHETRSIIKLRFIIAG 100
L F V+ F+ VTE +DLG ++A RT +K +I G
Sbjct: 194 LDFTVITFAY--VTEFVDLGNVSALRTFRVLRALKTISVIPG 233
>AC010127-1|AAX81984.1| 1998|Homo sapiens unknown protein.
Length = 1998
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = -2
Query: 225 LIFAVLLFSLFVVTERLDLGTIAAARTHETRSIIKLRFIIAG 100
L F V+ F+ VTE +DLG ++A RT +K +I G
Sbjct: 193 LDFTVITFAY--VTEFVDLGNVSALRTFRVLRALKTISVIPG 232
>AB208888-1|BAD92125.1| 1315|Homo sapiens Sodium channel protein
type II alpha subunit variant protein.
Length = 1315
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = -2
Query: 225 LIFAVLLFSLFVVTERLDLGTIAAARTHETRSIIKLRFIIAG 100
L F V+ F+ VTE +DLG ++A RT +K +I G
Sbjct: 201 LDFTVITFAY--VTEFVDLGNVSALRTFRVLRALKTISVIPG 240
>AB098335-1|BAC45228.1| 1981|Homo sapiens Voltage-gated sodium
channel alpha 1 subunit protein.
Length = 1981
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = -2
Query: 225 LIFAVLLFSLFVVTERLDLGTIAAARTHETRSIIKLRFIIAG 100
L F V+ F+ VTE +DLG ++A RT +K +I G
Sbjct: 193 LDFTVITFAY--VTEFVDLGNVSALRTFRVLRALKTISVIPG 232
>AB093549-1|BAC21102.1| 1998|Homo sapiens Voltage-gated sodium
channel alpha1 subunit protein.
Length = 1998
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = -2
Query: 225 LIFAVLLFSLFVVTERLDLGTIAAARTHETRSIIKLRFIIAG 100
L F V+ F+ VTE +DLG ++A RT +K +I G
Sbjct: 193 LDFTVITFAY--VTEFVDLGNVSALRTFRVLRALKTISVIPG 232
>AB093548-1|BAC21101.1| 2009|Homo sapiens voltage-gated sodium
channel alpha1 subunit protein.
Length = 2009
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = -2
Query: 225 LIFAVLLFSLFVVTERLDLGTIAAARTHETRSIIKLRFIIAG 100
L F V+ F+ VTE +DLG ++A RT +K +I G
Sbjct: 193 LDFTVITFAY--VTEFVDLGNVSALRTFRVLRALKTISVIPG 232
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,738,353
Number of Sequences: 237096
Number of extensions: 924113
Number of successful extensions: 1755
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1755
length of database: 76,859,062
effective HSP length: 78
effective length of database: 58,365,574
effective search space used: 1459139350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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