Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_L08
         (313 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S76959-1|AAB33934.1|   85|Apis mellifera olfactory receptor prot...    21   2.6  
AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex det...    21   3.5  
AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex det...    21   3.5  
AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex det...    21   3.5  
AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex det...    21   3.5  
AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex det...    21   3.5  
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    21   3.5  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    21   3.5  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   4.6  

>S76959-1|AAB33934.1|   85|Apis mellifera olfactory receptor
           protein.
          Length = 85

 Score = 21.4 bits (43), Expect = 2.6
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -2

Query: 255 QAQGVCGAHILIFAVLLFSLFVVT 184
           +A G CG+HI+I   L +   ++T
Sbjct: 48  KAIGTCGSHIIIVG-LFYEFGLIT 70


>AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 3.5
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = -1

Query: 160 SGGENARNKEYYQTSIHYCRLRCC 89
           S    +R   +  TS HY R R C
Sbjct: 214 SNSLRSRTHGFQHTSSHYSRERSC 237


>AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 3.5
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = -1

Query: 160 SGGENARNKEYYQTSIHYCRLRCC 89
           S    +R   +  TS HY R R C
Sbjct: 214 SNSLRSRTHGFQHTSSHYSRERSC 237


>AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 3.5
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = -1

Query: 160 SGGENARNKEYYQTSIHYCRLRCC 89
           S    +R   +  TS HY R R C
Sbjct: 214 SNSLRSRTHGFQHTSSHYSRERSC 237


>AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 3.5
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = -1

Query: 160 SGGENARNKEYYQTSIHYCRLRCC 89
           S    +R   +  TS HY R R C
Sbjct: 214 SNSLRSRTHGFQHTSSHYSRERSC 237


>AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 21.0 bits (42), Expect = 3.5
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = -1

Query: 160 SGGENARNKEYYQTSIHYCRLRCC 89
           S    +R   +  TS HY R R C
Sbjct: 203 SNSLRSRTHGFQHTSSHYSRERSC 226


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 21.0 bits (42), Expect = 3.5
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = -1

Query: 160 SGGENARNKEYYQTSIHYCRLRCC 89
           S    +R   +  TS HY R R C
Sbjct: 214 SNSLRSRTHGFQHTSSHYSRERSC 237


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 21.0 bits (42), Expect = 3.5
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -1

Query: 196 ICSYRTP*SWDHSGGENARNKEYY 125
           I S+ T   WD  G    RN+ YY
Sbjct: 188 ISSFITNGEWDLLGVPGKRNEIYY 211


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 20.6 bits (41), Expect = 4.6
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +2

Query: 122 LIILLVSCVLAAAMVPRSRRSVTTNNEN 205
           + I++V  +L A  + RSR    T N N
Sbjct: 234 MTIIIVLYILIAIKLRRSRMLTATVNRN 261


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,236
Number of Sequences: 438
Number of extensions: 1867
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  6595479
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)