Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_L06
(304 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80776-1|AAC52012.1| 671|Homo sapiens unknown protein. 65 3e-11
DQ341316-1|ABC72087.1| 344|Homo sapiens SETMAR protein. 65 3e-11
BC008931-1|AAH08931.2| 429|Homo sapiens SETMAR protein protein. 65 3e-11
AY952295-1|AAY29570.1| 671|Homo sapiens metnase protein. 65 3e-11
AK222734-1|BAD96454.1| 671|Homo sapiens SET domain and mariner ... 65 3e-11
AF054989-1|AAC09350.1| 671|Homo sapiens unknown protein. 65 3e-11
U52077-1|AAC52010.1| 343|Homo sapiens mariner transposase protein. 65 4e-11
U49974-1|AAC52011.1| 351|Homo sapiens mariner transposase protein. 36 0.031
BC040665-1|AAH40665.1| 254|Homo sapiens LOC387790 protein protein. 32 0.38
AK095089-1|BAC04485.1| 210|Homo sapiens protein ( Homo sapiens ... 32 0.38
X17033-1|CAA34894.1| 1181|Homo sapiens protein ( Human mRNA for ... 29 3.5
U70136-1|AAB09089.1| 1404|Homo sapiens megakaryocyte stimulating... 29 3.5
AL133553-1|CAC36090.1| 1404|Homo sapiens proteoglycan 4 protein. 29 3.5
AK131434-1|BAD18580.1| 933|Homo sapiens protein ( Homo sapiens ... 29 3.5
AF512556-1|AAM34795.1| 1181|Homo sapiens integrin, alpha 2 (CD49... 29 3.5
AL162582-2|CAI20004.1| 334|Homo sapiens solute carrier family 2... 28 4.7
AL162582-1|CAI20003.1| 555|Homo sapiens solute carrier family 2... 28 4.7
>U80776-1|AAC52012.1| 671|Homo sapiens unknown protein.
Length = 671
Score = 65.3 bits (152), Expect = 3e-11
Identities = 32/94 (34%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Frame = +2
Query: 32 MENWKYRFIYEYEFHRGTCATQTARRINDVYGKDTVKKSTVRFWFQRFRSGNFDLQNEPR 211
++ + R I+ +EF G A +T R IN+ +G T + TV++WF++F G+ L++E R
Sbjct: 333 LDKKQIRAIFLFEFKMGRKAAETTRNINNAFGPGTANERTVQWWFKKFCKGDESLEDEER 392
Query: 212 E---QGVDNEELTASIEPDLSQTPQDIATVINMS 304
VDN++L A IE D T +++A +N++
Sbjct: 393 SGRPSEVDNDQLRAIIEADPLTTTREVAEELNVN 426
>DQ341316-1|ABC72087.1| 344|Homo sapiens SETMAR protein.
Length = 344
Score = 65.3 bits (152), Expect = 3e-11
Identities = 32/94 (34%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Frame = +2
Query: 32 MENWKYRFIYEYEFHRGTCATQTARRINDVYGKDTVKKSTVRFWFQRFRSGNFDLQNEPR 211
++ + R I+ +EF G A +T R IN+ +G T + TV++WF++F G+ L++E R
Sbjct: 6 LDKKQIRAIFLFEFKMGRKAAETTRNINNAFGPGTANERTVQWWFKKFCKGDESLEDEER 65
Query: 212 E---QGVDNEELTASIEPDLSQTPQDIATVINMS 304
VDN++L A IE D T +++A +N++
Sbjct: 66 SGRPSEVDNDQLRAIIEADPLTTTREVAEELNVN 99
>BC008931-1|AAH08931.2| 429|Homo sapiens SETMAR protein protein.
Length = 429
Score = 65.3 bits (152), Expect = 3e-11
Identities = 32/94 (34%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Frame = +2
Query: 32 MENWKYRFIYEYEFHRGTCATQTARRINDVYGKDTVKKSTVRFWFQRFRSGNFDLQNEPR 211
++ + R I+ +EF G A +T R IN+ +G T + TV++WF++F G+ L++E R
Sbjct: 91 LDKKQIRAIFLFEFKMGRKAAETTRNINNAFGPGTANERTVQWWFKKFCKGDESLEDEER 150
Query: 212 E---QGVDNEELTASIEPDLSQTPQDIATVINMS 304
VDN++L A IE D T +++A +N++
Sbjct: 151 SGRPSEVDNDQLRAIIEADPLTTTREVAEELNVN 184
>AY952295-1|AAY29570.1| 671|Homo sapiens metnase protein.
Length = 671
Score = 65.3 bits (152), Expect = 3e-11
Identities = 32/94 (34%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Frame = +2
Query: 32 MENWKYRFIYEYEFHRGTCATQTARRINDVYGKDTVKKSTVRFWFQRFRSGNFDLQNEPR 211
++ + R I+ +EF G A +T R IN+ +G T + TV++WF++F G+ L++E R
Sbjct: 333 LDKKQIRAIFLFEFKMGRKAAETTRNINNAFGPGTANERTVQWWFKKFCKGDESLEDEER 392
Query: 212 E---QGVDNEELTASIEPDLSQTPQDIATVINMS 304
VDN++L A IE D T +++A +N++
Sbjct: 393 SGRPSEVDNDQLRAIIEADPLTTTREVAEELNVN 426
>AK222734-1|BAD96454.1| 671|Homo sapiens SET domain and mariner
transposase fusion gene variant protein.
Length = 671
Score = 65.3 bits (152), Expect = 3e-11
Identities = 32/94 (34%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Frame = +2
Query: 32 MENWKYRFIYEYEFHRGTCATQTARRINDVYGKDTVKKSTVRFWFQRFRSGNFDLQNEPR 211
++ + R I+ +EF G A +T R IN+ +G T + TV++WF++F G+ L++E R
Sbjct: 333 LDKKQIRAIFLFEFKMGRKAAETTRNINNAFGPGTANERTVQWWFKKFCKGDESLEDEER 392
Query: 212 E---QGVDNEELTASIEPDLSQTPQDIATVINMS 304
VDN++L A IE D T +++A +N++
Sbjct: 393 SGRPSEVDNDQLRAIIEADPLTTTREVAEELNVN 426
>AF054989-1|AAC09350.1| 671|Homo sapiens unknown protein.
Length = 671
Score = 65.3 bits (152), Expect = 3e-11
Identities = 32/94 (34%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Frame = +2
Query: 32 MENWKYRFIYEYEFHRGTCATQTARRINDVYGKDTVKKSTVRFWFQRFRSGNFDLQNEPR 211
++ + R I+ +EF G A +T R IN+ +G T + TV++WF++F G+ L++E R
Sbjct: 333 LDKKQIRAIFLFEFKMGRKAAETTRNINNAFGPGTANERTVQWWFKKFCKGDESLEDEER 392
Query: 212 E---QGVDNEELTASIEPDLSQTPQDIATVINMS 304
VDN++L A IE D T +++A +N++
Sbjct: 393 SGRPSEVDNDQLRAIIEADPLTTTREVAEELNVN 426
>U52077-1|AAC52010.1| 343|Homo sapiens mariner transposase protein.
Length = 343
Score = 64.9 bits (151), Expect = 4e-11
Identities = 32/93 (34%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Frame = +2
Query: 32 MENWKYRFIYEYEFHRGTCATQTARRINDVYGKDTVKKSTVRFWFQRFRSGNFDLQNEPR 211
++ + R I+ +EF G A +T R IN+ +G T + TV++WF++F G+ L++E R
Sbjct: 5 LDKKQIRAIFLFEFKMGRKAAETTRNINNAFGPGTANERTVQWWFKKFCKGDESLEDEER 64
Query: 212 E---QGVDNEELTASIEPDLSQTPQDIATVINM 301
VDN++L A IE D T +++A +N+
Sbjct: 65 SGRPSEVDNDQLRAIIEADPLTTTREVAEELNV 97
>U49974-1|AAC52011.1| 351|Homo sapiens mariner transposase protein.
Length = 351
Score = 35.5 bits (78), Expect = 0.031
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Frame = +2
Query: 110 INDVYGKDTVKKSTVRFWFQRFRSGNFDLQNEPR----EQGVDNEELT---ASIEPDLSQ 268
+ VYG + KKS V W RF+ G D+++E R + E++ A IE D
Sbjct: 29 LRKVYGDNAPKKSAVYKWITRFKKGRDDVEDEARSGRPSTSICEEKINLVRALIEEDRRL 88
Query: 269 TPQDIATVINMS 304
T + IA ++S
Sbjct: 89 TAETIANTTDIS 100
>BC040665-1|AAH40665.1| 254|Homo sapiens LOC387790 protein protein.
Length = 254
Score = 31.9 bits (69), Expect = 0.38
Identities = 11/41 (26%), Positives = 25/41 (60%)
Frame = +2
Query: 89 ATQTARRINDVYGKDTVKKSTVRFWFQRFRSGNFDLQNEPR 211
A++T + + YG + + ++ V W +RF+ G D++++ R
Sbjct: 22 ASETHHLLKEAYGDEVMSRARVFDWHKRFKEGREDVRDDAR 62
>AK095089-1|BAC04485.1| 210|Homo sapiens protein ( Homo sapiens
cDNA FLJ37770 fis, clone BRHIP2025448. ).
Length = 210
Score = 31.9 bits (69), Expect = 0.38
Identities = 11/41 (26%), Positives = 25/41 (60%)
Frame = +2
Query: 89 ATQTARRINDVYGKDTVKKSTVRFWFQRFRSGNFDLQNEPR 211
A++T + + YG + + ++ V W +RF+ G D++++ R
Sbjct: 22 ASETHHLLKEAYGDEVMSRARVFDWHKRFKEGREDVRDDAR 62
>X17033-1|CAA34894.1| 1181|Homo sapiens protein ( Human mRNA for
integrin alpha-2 subunit. ).
Length = 1181
Score = 28.7 bits (61), Expect = 3.5
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = +2
Query: 23 GSGMENWKYRFIYEYEFHRGTCATQTARRINDVYGKDTVKKSTVRFWFQRFRSGNFDLQN 202
GS +EN +Y Y H+GT T+ +++I G D +S +++ F R G DL
Sbjct: 575 GSPLENQNSGAVYIYNGHQGTIRTKYSQKI---LGSDGAFRSHLQY-FGRSLDGYGDLNG 630
Query: 203 E 205
+
Sbjct: 631 D 631
>U70136-1|AAB09089.1| 1404|Homo sapiens megakaryocyte stimulating
factor protein.
Length = 1404
Score = 28.7 bits (61), Expect = 3.5
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +2
Query: 194 LQNEPREQGVDNEELTASIEPDLSQTPQDIAT 289
L+N P+E GV + A+ +P+++ T +D T
Sbjct: 889 LENSPKEPGVPTTKTPAATKPEMTTTAKDKTT 920
>AL133553-1|CAC36090.1| 1404|Homo sapiens proteoglycan 4 protein.
Length = 1404
Score = 28.7 bits (61), Expect = 3.5
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +2
Query: 194 LQNEPREQGVDNEELTASIEPDLSQTPQDIAT 289
L+N P+E GV + A+ +P+++ T +D T
Sbjct: 889 LENSPKEPGVPTTKTPAATKPEMTTTAKDKTT 920
>AK131434-1|BAD18580.1| 933|Homo sapiens protein ( Homo sapiens
cDNA FLJ16561 fis, clone SYNOV4003981, moderately
similar to Homo sapiens proteoglycan 4, (megakaryocyte
stimulating ).
Length = 933
Score = 28.7 bits (61), Expect = 3.5
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +2
Query: 194 LQNEPREQGVDNEELTASIEPDLSQTPQDIAT 289
L+N P+E GV + A+ +P+++ T +D T
Sbjct: 418 LENSPKEPGVPTTKTPAATKPEMTTTAKDKTT 449
>AF512556-1|AAM34795.1| 1181|Homo sapiens integrin, alpha 2 (CD49B,
alpha 2 subunit of VLA-2 receptor) protein.
Length = 1181
Score = 28.7 bits (61), Expect = 3.5
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = +2
Query: 23 GSGMENWKYRFIYEYEFHRGTCATQTARRINDVYGKDTVKKSTVRFWFQRFRSGNFDLQN 202
GS +EN +Y Y H+GT T+ +++I G D +S +++ F R G DL
Sbjct: 575 GSPLENQNSGAVYIYNGHQGTIRTKYSQKI---LGSDGAFRSHLQY-FGRSLDGYGDLNG 630
Query: 203 E 205
+
Sbjct: 631 D 631
>AL162582-2|CAI20004.1| 334|Homo sapiens solute carrier family 22
(organic cation transporter), member 2 protein.
Length = 334
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -2
Query: 147 LFFTVSFPYTSFILRAVCVAQVPRW 73
L FTVS P F+L C+ + PRW
Sbjct: 244 LQFTVSLPNFFFLLYYWCIPESPRW 268
>AL162582-1|CAI20003.1| 555|Homo sapiens solute carrier family 22
(organic cation transporter), member 2 protein.
Length = 555
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -2
Query: 147 LFFTVSFPYTSFILRAVCVAQVPRW 73
L FTVS P F+L C+ + PRW
Sbjct: 265 LQFTVSLPNFFFLLYYWCIPESPRW 289
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,532,944
Number of Sequences: 237096
Number of extensions: 880383
Number of successful extensions: 1944
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1898
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1944
length of database: 76,859,062
effective HSP length: 77
effective length of database: 58,602,670
effective search space used: 1347861410
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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