Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_L03
(349 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB065580-1|BAC05810.1| 346|Homo sapiens seven transmembrane hel... 30 1.7
BC131580-1|AAI31581.1| 430|Homo sapiens neuropeptide FF recepto... 29 3.0
AL355138-1|CAI12599.1| 428|Homo sapiens neuropeptide FF recepto... 29 3.0
AF330055-1|AAK94199.1| 430|Homo sapiens neuropeptide NPVF recep... 29 3.0
AF268898-1|AAG41397.1| 430|Homo sapiens neuropeptide FF recepto... 29 3.0
AB065729-1|BAC05950.1| 441|Homo sapiens seven transmembrane hel... 29 3.0
AB040104-1|BAB17677.1| 430|Homo sapiens RFamide-related peptide... 29 3.0
X73114-1|CAA51545.1| 1123|Homo sapiens slow MyBP-C protein. 28 9.3
X66276-1|CAA46987.1| 1138|Homo sapiens C protein protein. 28 9.3
D87071-1|BAA13240.1| 2035|Homo sapiens KIAA0233 protein. 28 9.3
BC150271-1|AAI50272.1| 2035|Homo sapiens family with sequence si... 28 9.3
BC092418-1|AAH92418.1| 1123|Homo sapiens myosin binding protein ... 28 9.3
AB161230-1|BAF03565.1| 2090|Homo sapiens Mib protein. 28 9.3
>AB065580-1|BAC05810.1| 346|Homo sapiens seven transmembrane helix
receptor protein.
Length = 346
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +2
Query: 29 YVSLVAICNCFTRVHCSIVISILDCICGG*SVIMCISM 142
YVS V++C C +H S+ + + CIC SV +C+S+
Sbjct: 100 YVS-VSVCLC-VYLHISVYLCVYVCICVCVSVSLCVSV 135
>BC131580-1|AAI31581.1| 430|Homo sapiens neuropeptide FF receptor 1
protein.
Length = 430
Score = 29.5 bits (63), Expect = 3.0
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -1
Query: 166 PGSDWTLLHTNTHNDTSPATDTIENRYYNRT 74
P S W L T+ + +PAT+ + YY T
Sbjct: 9 PNSSWPLSQNGTNTEATPATNLTFSSYYQHT 39
>AL355138-1|CAI12599.1| 428|Homo sapiens neuropeptide FF receptor 1
protein.
Length = 428
Score = 29.5 bits (63), Expect = 3.0
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -1
Query: 166 PGSDWTLLHTNTHNDTSPATDTIENRYYNRT 74
P S W L T+ + +PAT+ + YY T
Sbjct: 7 PNSSWPLSQNGTNTEATPATNLTFSSYYQHT 37
>AF330055-1|AAK94199.1| 430|Homo sapiens neuropeptide NPVF receptor
protein.
Length = 430
Score = 29.5 bits (63), Expect = 3.0
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -1
Query: 166 PGSDWTLLHTNTHNDTSPATDTIENRYYNRT 74
P S W L T+ + +PAT+ + YY T
Sbjct: 9 PNSSWPLSQNGTNTEATPATNLTFSSYYQHT 39
>AF268898-1|AAG41397.1| 430|Homo sapiens neuropeptide FF receptor 1
protein.
Length = 430
Score = 29.5 bits (63), Expect = 3.0
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -1
Query: 166 PGSDWTLLHTNTHNDTSPATDTIENRYYNRT 74
P S W L T+ + +PAT+ + YY T
Sbjct: 9 PNSSWPLSQNGTNTEATPATNLTFSSYYQHT 39
>AB065729-1|BAC05950.1| 441|Homo sapiens seven transmembrane helix
receptor protein.
Length = 441
Score = 29.5 bits (63), Expect = 3.0
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -1
Query: 166 PGSDWTLLHTNTHNDTSPATDTIENRYYNRT 74
P S W L T+ + +PAT+ + YY T
Sbjct: 20 PNSSWPLSQNGTNTEATPATNLTFSSYYQHT 50
>AB040104-1|BAB17677.1| 430|Homo sapiens RFamide-related peptide
receptor protein.
Length = 430
Score = 29.5 bits (63), Expect = 3.0
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -1
Query: 166 PGSDWTLLHTNTHNDTSPATDTIENRYYNRT 74
P S W L T+ + +PAT+ + YY T
Sbjct: 9 PNSSWPLSQNGTNTEATPATNLTFSSYYQHT 39
>X73114-1|CAA51545.1| 1123|Homo sapiens slow MyBP-C protein.
Length = 1123
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -1
Query: 220 ATAAARDEFVHDKNIGTAPGSDWTLLHT 137
A A +E +K GT P DWTL+ T
Sbjct: 14 APAPPPEEPSKEKEAGTTPAKDWTLVET 41
>X66276-1|CAA46987.1| 1138|Homo sapiens C protein protein.
Length = 1138
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -1
Query: 220 ATAAARDEFVHDKNIGTAPGSDWTLLHT 137
A A +E +K GT P DWTL+ T
Sbjct: 14 APAPPPEEPSKEKEAGTTPAKDWTLVET 41
>D87071-1|BAA13240.1| 2035|Homo sapiens KIAA0233 protein.
Length = 2035
Score = 27.9 bits (59), Expect = 9.3
Identities = 18/59 (30%), Positives = 25/59 (42%)
Frame = +3
Query: 150 VQSEPGAVPMFLSCTNSSRAAAVAPRTYLFRI*LTIKFYNQTYVILYFFIINNKICXYL 326
++ EP VP F+ C + VA YLF + L + F I F + C YL
Sbjct: 652 LRGEPNPVPNFIHCRSYLDMLKVAVFRYLFWLVLVVVFVTGATRISIFGLGYLLACFYL 710
>BC150271-1|AAI50272.1| 2035|Homo sapiens family with sequence
similarity 38, member A protein.
Length = 2035
Score = 27.9 bits (59), Expect = 9.3
Identities = 18/59 (30%), Positives = 25/59 (42%)
Frame = +3
Query: 150 VQSEPGAVPMFLSCTNSSRAAAVAPRTYLFRI*LTIKFYNQTYVILYFFIINNKICXYL 326
++ EP VP F+ C + VA YLF + L + F I F + C YL
Sbjct: 652 LRGEPNPVPNFIHCRSYLDMLKVAVFRYLFWLVLVVVFVTGATRISIFGLGYLLACFYL 710
>BC092418-1|AAH92418.1| 1123|Homo sapiens myosin binding protein C,
slow type protein.
Length = 1123
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -1
Query: 220 ATAAARDEFVHDKNIGTAPGSDWTLLHT 137
A A +E +K GT P DWTL+ T
Sbjct: 14 APAPPPEEPSKEKEAGTTPAKDWTLVET 41
>AB161230-1|BAF03565.1| 2090|Homo sapiens Mib protein.
Length = 2090
Score = 27.9 bits (59), Expect = 9.3
Identities = 18/59 (30%), Positives = 25/59 (42%)
Frame = +3
Query: 150 VQSEPGAVPMFLSCTNSSRAAAVAPRTYLFRI*LTIKFYNQTYVILYFFIINNKICXYL 326
++ EP VP F+ C + VA YLF + L + F I F + C YL
Sbjct: 707 LRGEPNPVPNFIHCRSYLDMLKVAVFRYLFWLVLVVVFVTGATRISIFGLGYLLACFYL 765
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,004,097
Number of Sequences: 237096
Number of extensions: 723814
Number of successful extensions: 2305
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2303
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 2026198370
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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