Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_L03
         (349 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113258-1|AAM29263.1|  477|Drosophila melanogaster AT15039p pro...    29   1.2  
AE014297-248|AAF52030.1|  477|Drosophila melanogaster CG12147-PA...    29   1.2  
BT021284-1|AAX33432.1|  409|Drosophila melanogaster RE35255p pro...    29   2.1  
AE014297-75|AAF52135.1|  409|Drosophila melanogaster CG14646-PA ...    29   2.1  
AE013599-2859|AAM70848.1|  929|Drosophila melanogaster CG30127-P...    27   6.5  

>AY113258-1|AAM29263.1|  477|Drosophila melanogaster AT15039p
           protein.
          Length = 477

 Score = 29.5 bits (63), Expect = 1.2
 Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = -3

Query: 242 SKQVSARRDRGGSRRVCT-RQKHRNRTR 162
           S+Q    RDRGG R V   +++HRN+ R
Sbjct: 360 SQQKGRERDRGGKRNVVVQKERHRNKDR 387


>AE014297-248|AAF52030.1|  477|Drosophila melanogaster CG12147-PA
           protein.
          Length = 477

 Score = 29.5 bits (63), Expect = 1.2
 Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = -3

Query: 242 SKQVSARRDRGGSRRVCT-RQKHRNRTR 162
           S+Q    RDRGG R V   +++HRN+ R
Sbjct: 360 SQQKGRERDRGGKRNVVVQKERHRNKDR 387


>BT021284-1|AAX33432.1|  409|Drosophila melanogaster RE35255p
           protein.
          Length = 409

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 11/26 (42%), Positives = 19/26 (73%)
 Frame = -2

Query: 150 LYYILIHIMTLHPPQIQSRIDITIEQ 73
           L+YIL+ ++ ++PP+   R+  TIEQ
Sbjct: 10  LFYILLCMVIIYPPEEFQRLGFTIEQ 35


>AE014297-75|AAF52135.1|  409|Drosophila melanogaster CG14646-PA
           protein.
          Length = 409

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 11/26 (42%), Positives = 19/26 (73%)
 Frame = -2

Query: 150 LYYILIHIMTLHPPQIQSRIDITIEQ 73
           L+YIL+ ++ ++PP+   R+  TIEQ
Sbjct: 10  LFYILLCMVIIYPPEEFQRLGFTIEQ 35


>AE013599-2859|AAM70848.1|  929|Drosophila melanogaster CG30127-PA
           protein.
          Length = 929

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -1

Query: 193 VHDKNIGTAPGSDWTLLHTNTHNDTSPATDTIE 95
           + D  I T+  S  TL+   TH DTS   D+++
Sbjct: 316 IPDTTINTSTDSACTLITNVTHTDTSETCDSLD 348


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,477,644
Number of Sequences: 53049
Number of extensions: 240011
Number of successful extensions: 632
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 632
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 817309116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)