Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_L02
         (336 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q2U4U3 Cluster: Predicted protein; n=7; Trichocomaceae|...    33   1.3  
UniRef50_Q7S4U0 Cluster: Predicted protein; n=1; Neurospora cras...    33   1.7  
UniRef50_Q0U520 Cluster: Predicted protein; n=1; Phaeosphaeria n...    32   2.9  
UniRef50_UPI00004D5000 Cluster: Apolipoprotein-L6 (Apolipoprotei...    31   3.8  
UniRef50_A0KF91 Cluster: ACC deaminase/D-cysteine desulfhydrase ...    31   6.7  
UniRef50_Q026L6 Cluster: Pyrrolo-quinoline quinone precursor; n=...    30   8.9  

>UniRef50_Q2U4U3 Cluster: Predicted protein; n=7;
           Trichocomaceae|Rep: Predicted protein - Aspergillus
           oryzae
          Length = 428

 Score = 33.1 bits (72), Expect = 1.3
 Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = -3

Query: 187 FARCIFLNDNTRE*LQFPFIFIRRPWCSPA-SYHH 86
           F+  I  N N  E  +F   F RRPWC PA ++HH
Sbjct: 269 FSWPILQNTNIGELDEFTTAFYRRPWCFPAVAFHH 303


>UniRef50_Q7S4U0 Cluster: Predicted protein; n=1; Neurospora
           crassa|Rep: Predicted protein - Neurospora crassa
          Length = 1272

 Score = 32.7 bits (71), Expect = 1.7
 Identities = 19/49 (38%), Positives = 26/49 (53%)
 Frame = +2

Query: 131 EGKLELFSGVVIEKDASGENKLNVKFEPGELREAARTFEEARGKIKKYT 277
           +G L +  G  I+ DA G+  + V  E  + RE  R  EEAR K+K  T
Sbjct: 669 DGTLPMDMGPDIDMDADGDMDMCVDQETEKRRERERYLEEARLKVKDVT 717


>UniRef50_Q0U520 Cluster: Predicted protein; n=1; Phaeosphaeria
           nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
           (Septoria nodorum)
          Length = 271

 Score = 31.9 bits (69), Expect = 2.9
 Identities = 16/55 (29%), Positives = 22/55 (40%)
 Frame = -2

Query: 191 CFRQMHLSQ*QHQRIAPVSLHLHSPPLVQPCKLPPCIIPNTIHAFSQNLL*SYPD 27
           C     + Q QHQ  +    H+HSP    P   PP ++P       +N     PD
Sbjct: 30  CEHLCRIHQMQHQTPSAFYKHIHSPYATPPATPPPALLPRKRPPLRRNTTLPTPD 84


>UniRef50_UPI00004D5000 Cluster: Apolipoprotein-L6 (Apolipoprotein
           L-VI) (ApoL-VI).; n=1; Xenopus tropicalis|Rep:
           Apolipoprotein-L6 (Apolipoprotein L-VI) (ApoL-VI). -
           Xenopus tropicalis
          Length = 278

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = +2

Query: 122 NEDEGKLELFSGVVIEKDASGENKLNVKFEPGELREAARTFEEARGKIKKYTP 280
           +E E K E   G  +E+D +   K NVK +  +L E  +TF +  G++++  P
Sbjct: 3   SEQESKTERTIGTTLEEDTTLLKK-NVKLQCKDLEEKLKTFVKELGEVQETLP 54


>UniRef50_A0KF91 Cluster: ACC deaminase/D-cysteine desulfhydrase
           family protein; n=2; Aeromonas|Rep: ACC
           deaminase/D-cysteine desulfhydrase family protein -
           Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966
           / NCIB 9240)
          Length = 315

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = -2

Query: 137 SLHLHSPPLVQPCKLPPCIIPNTIHAFSQNLL*SY 33
           SL  HS P+  P  LPP ++P+ + A S  LL +Y
Sbjct: 5   SLSPHSSPMALP-PLPPALVPSPLQAVSHPLLIAY 38


>UniRef50_Q026L6 Cluster: Pyrrolo-quinoline quinone precursor; n=3;
           Solibacter usitatus Ellin6076|Rep: Pyrrolo-quinoline
           quinone precursor - Solibacter usitatus (strain
           Ellin6076)
          Length = 572

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = +3

Query: 66  YCVWYYAWW*LAGLHQGRR-MKMKGNWSY 149
           + +W+Y W    G H G R M M GNW +
Sbjct: 145 HVLWHYVWKTKGGTHTGNRGMGMWGNWLF 173


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 295,381,974
Number of Sequences: 1657284
Number of extensions: 4666346
Number of successful extensions: 11474
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11471
length of database: 575,637,011
effective HSP length: 87
effective length of database: 431,453,303
effective search space used: 10354879272
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)