BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_L02
(336 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051856-1|AAK93280.1| 874|Drosophila melanogaster LD35413p pro... 30 0.86
AE014297-1407|AAO41547.1| 514|Drosophila melanogaster CG31211-P... 30 0.86
AE014297-1406|AAF54719.2| 874|Drosophila melanogaster CG31211-P... 30 0.86
AE014297-1405|AAO41546.1| 893|Drosophila melanogaster CG31211-P... 30 0.86
AY058538-1|AAL13767.1| 268|Drosophila melanogaster LD24139p pro... 27 4.6
AE014297-430|AAF51893.1| 268|Drosophila melanogaster CG1155-PA ... 27 4.6
AY122260-1|AAM52772.1| 1253|Drosophila melanogaster SD09478p pro... 27 6.0
AJ421624-1|CAD13484.1| 1253|Drosophila melanogaster Eps-15 prote... 27 6.0
AE013599-3950|AAF47267.2| 1253|Drosophila melanogaster CG16932-P... 27 6.0
AE013599-3949|AAM70793.1| 1232|Drosophila melanogaster CG16932-P... 27 6.0
AE013599-3948|AAM70792.1| 1106|Drosophila melanogaster CG16932-P... 27 6.0
AF181653-1|AAD55438.1| 998|Drosophila melanogaster BcDNA.LD2363... 27 8.0
AE014298-768|AAF46056.1| 998|Drosophila melanogaster CG4119-PA ... 27 8.0
>AY051856-1|AAK93280.1| 874|Drosophila melanogaster LD35413p
protein.
Length = 874
Score = 29.9 bits (64), Expect = 0.86
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -2
Query: 182 QMHLSQ*QHQRIAPVSLHLHSPPLVQPCKLPPCIIPNT 69
Q+ Q Q Q+ AP H H PP QP P + P+T
Sbjct: 230 QLQAHQQQQQQHAPQPTHPHHPPAHQPHAHPHHLTPHT 267
>AE014297-1407|AAO41547.1| 514|Drosophila melanogaster CG31211-PC,
isoform C protein.
Length = 514
Score = 29.9 bits (64), Expect = 0.86
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -2
Query: 182 QMHLSQ*QHQRIAPVSLHLHSPPLVQPCKLPPCIIPNT 69
Q+ Q Q Q+ AP H H PP QP P + P+T
Sbjct: 230 QLQAHQQQQQQHAPQPTHPHHPPAHQPHAHPHHLTPHT 267
>AE014297-1406|AAF54719.2| 874|Drosophila melanogaster CG31211-PA,
isoform A protein.
Length = 874
Score = 29.9 bits (64), Expect = 0.86
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -2
Query: 182 QMHLSQ*QHQRIAPVSLHLHSPPLVQPCKLPPCIIPNT 69
Q+ Q Q Q+ AP H H PP QP P + P+T
Sbjct: 230 QLQAHQQQQQQHAPQPTHPHHPPAHQPHAHPHHLTPHT 267
>AE014297-1405|AAO41546.1| 893|Drosophila melanogaster CG31211-PB,
isoform B protein.
Length = 893
Score = 29.9 bits (64), Expect = 0.86
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -2
Query: 182 QMHLSQ*QHQRIAPVSLHLHSPPLVQPCKLPPCIIPNT 69
Q+ Q Q Q+ AP H H PP QP P + P+T
Sbjct: 230 QLQAHQQQQQQHAPQPTHPHHPPAHQPHAHPHHLTPHT 267
>AY058538-1|AAL13767.1| 268|Drosophila melanogaster LD24139p
protein.
Length = 268
Score = 27.5 bits (58), Expect = 4.6
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +2
Query: 110 PGAANEDEGKLELFSGVVIEKDASGENKLNVKFEPGELREAARTFEEARGKIKK 271
P A+E G+L + V D + L K ++ AR +E RGKIKK
Sbjct: 104 PQNADERTGRL-VDLAVSSAADFLSTHNLEFKLPAETTQQVARALDEGRGKIKK 156
>AE014297-430|AAF51893.1| 268|Drosophila melanogaster CG1155-PA
protein.
Length = 268
Score = 27.5 bits (58), Expect = 4.6
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +2
Query: 110 PGAANEDEGKLELFSGVVIEKDASGENKLNVKFEPGELREAARTFEEARGKIKK 271
P A+E G+L + V D + L K ++ AR +E RGKIKK
Sbjct: 104 PQNADERTGRL-VDLAVSSAADFLSTHNLEFKLPAETTQQVARALDEGRGKIKK 156
>AY122260-1|AAM52772.1| 1253|Drosophila melanogaster SD09478p protein.
Length = 1253
Score = 27.1 bits (57), Expect = 6.0
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = -1
Query: 111 GAALQATTMHNTKHNTRIFSKFTLKLSGLYSYEGPS 4
GAA ATT NTK N F F S + S P+
Sbjct: 1115 GAATTATTTGNTKLNNSFFDAFNDNFSVIQSSSVPT 1150
>AJ421624-1|CAD13484.1| 1253|Drosophila melanogaster Eps-15 protein
protein.
Length = 1253
Score = 27.1 bits (57), Expect = 6.0
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = -1
Query: 111 GAALQATTMHNTKHNTRIFSKFTLKLSGLYSYEGPS 4
GAA ATT NTK N F F S + S P+
Sbjct: 1115 GAATTATTTGNTKLNNSFFDAFNDNFSVIQSSSVPT 1150
>AE013599-3950|AAF47267.2| 1253|Drosophila melanogaster CG16932-PA,
isoform A protein.
Length = 1253
Score = 27.1 bits (57), Expect = 6.0
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = -1
Query: 111 GAALQATTMHNTKHNTRIFSKFTLKLSGLYSYEGPS 4
GAA ATT NTK N F F S + S P+
Sbjct: 1115 GAATTATTTGNTKLNNSFFDAFNDNFSVIQSSSVPT 1150
>AE013599-3949|AAM70793.1| 1232|Drosophila melanogaster CG16932-PB,
isoform B protein.
Length = 1232
Score = 27.1 bits (57), Expect = 6.0
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = -1
Query: 111 GAALQATTMHNTKHNTRIFSKFTLKLSGLYSYEGPS 4
GAA ATT NTK N F F S + S P+
Sbjct: 1094 GAATTATTTGNTKLNNSFFDAFNDNFSVIQSSSVPT 1129
>AE013599-3948|AAM70792.1| 1106|Drosophila melanogaster CG16932-PC,
isoform C protein.
Length = 1106
Score = 27.1 bits (57), Expect = 6.0
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = -1
Query: 111 GAALQATTMHNTKHNTRIFSKFTLKLSGLYSYEGPS 4
GAA ATT NTK N F F S + S P+
Sbjct: 968 GAATTATTTGNTKLNNSFFDAFNDNFSVIQSSSVPT 1003
>AF181653-1|AAD55438.1| 998|Drosophila melanogaster BcDNA.LD23634
protein.
Length = 998
Score = 26.6 bits (56), Expect = 8.0
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 167 EKDASGENKLNVKFEPGELREAARTFEEARGKIKK-YTP 280
EK+A +L KF GE + FE+AR +I+K Y P
Sbjct: 536 EKEAEELAELKSKFFSGEYENPSLEFEKARLEIEKLYEP 574
>AE014298-768|AAF46056.1| 998|Drosophila melanogaster CG4119-PA
protein.
Length = 998
Score = 26.6 bits (56), Expect = 8.0
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 167 EKDASGENKLNVKFEPGELREAARTFEEARGKIKK-YTP 280
EK+A +L KF GE + FE+AR +I+K Y P
Sbjct: 536 EKEAEELAELKSKFFSGEYENPSLEFEKARLEIEKLYEP 574
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,217,654
Number of Sequences: 53049
Number of extensions: 223769
Number of successful extensions: 510
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 510
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 756348948
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -