Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_L02
         (336 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   2.3  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   3.0  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     21   5.3  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   5.3  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    20   9.2  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          20   9.2  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.8 bits (44), Expect = 2.3
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = +2

Query: 119 ANEDEGKLELFSGVVIEKDASGENKLNVKFEPGELREAA 235
           +NEDE +  L   VVI  D S E  L    E    R +A
Sbjct: 434 SNEDEDETPLDPVVVISNDKSTEFFLATVVEEAACRFSA 472


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.4 bits (43), Expect = 3.0
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -3

Query: 328 EKGHHGNHLNTNAS 287
           ++ HHG H+N++ S
Sbjct: 807 QQSHHGLHINSSPS 820


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 20.6 bits (41), Expect = 5.3
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = -3

Query: 139 FPFIFIRRPWCSPASYHHA 83
           FP  +I  PW +P +   A
Sbjct: 456 FPTRYIHEPWNAPLNVQRA 474


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 20.6 bits (41), Expect = 5.3
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = -1

Query: 108 AALQATTMHNTKHNTRIFSKF 46
           + L +T  + +KHNT+ F+++
Sbjct: 378 SCLGSTETYYSKHNTQQFTQY 398


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 6/25 (24%), Positives = 12/25 (48%)
 Frame = +3

Query: 72  VWYYAWW*LAGLHQGRRMKMKGNWS 146
           +W++ W     L  G  +K   +W+
Sbjct: 1   MWHFLWIVFLALANGEEIKTIYSWN 25


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -2

Query: 113 LVQPCKLPPCIIPNTI 66
           L  PCK P  I+P  +
Sbjct: 66  LSNPCKHPTIIMPQDV 81


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,573
Number of Sequences: 438
Number of extensions: 1243
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7591023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)