Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_K22
         (459 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY525079-1|AAS13528.1|  359|Caenorhabditis elegans serine or cys...    30   0.70 
AF026209-15|AAB71270.1|  359|Caenorhabditis elegans Serpin prote...    30   0.70 
Z68115-2|CAA92167.1|  914|Caenorhabditis elegans Hypothetical pr...    29   1.2  
AL032630-11|CAA21570.1|  296|Caenorhabditis elegans Hypothetical...    28   2.8  
AC006757-3|AAF60541.2|  916|Caenorhabditis elegans Hypothetical ...    28   3.8  
L14745-6|AAA27920.1|  173|Caenorhabditis elegans Hypothetical pr...    27   8.7  
AF047656-9|AAC05107.1|  184|Caenorhabditis elegans Hypothetical ...    27   8.7  
AF016441-8|AAB65913.2|  212|Caenorhabditis elegans Hypothetical ...    27   8.7  

>AY525079-1|AAS13528.1|  359|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 359

 Score = 30.3 bits (65), Expect = 0.70
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -2

Query: 281 YSEDLLVYILAAFYGHAFFTLFFYIHRNDMGLIDKQE 171
           Y+ED+L  +L+  Y    FTL  ++ +   GL+D  E
Sbjct: 199 YTEDVLFQVLSLKYADPKFTLAIFLPKQRFGLVDALE 235


>AF026209-15|AAB71270.1|  359|Caenorhabditis elegans Serpin protein
           2 protein.
          Length = 359

 Score = 30.3 bits (65), Expect = 0.70
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -2

Query: 281 YSEDLLVYILAAFYGHAFFTLFFYIHRNDMGLIDKQE 171
           Y+ED+L  +L+  Y    FTL  ++ +   GL+D  E
Sbjct: 199 YTEDVLFQVLSLKYADPKFTLAIFLPKQRFGLVDALE 235


>Z68115-2|CAA92167.1|  914|Caenorhabditis elegans Hypothetical
           protein F19H6.3 protein.
          Length = 914

 Score = 29.5 bits (63), Expect = 1.2
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = -2

Query: 158 LTTAVKLKNHSHIL*SRYYLDDPQKALRYFVDF 60
           L  + +LK H H+L SRY ++ P+  ++Y  D+
Sbjct: 157 LVCSNELKKHLHVLPSRYAINKPKLPIKYGYDW 189


>AL032630-11|CAA21570.1|  296|Caenorhabditis elegans Hypothetical
           protein Y62H9A.11 protein.
          Length = 296

 Score = 28.3 bits (60), Expect = 2.8
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = -2

Query: 107 YYLDDPQKALRYFVDF 60
           YY+D PQK  RYF++F
Sbjct: 239 YYIDKPQKYKRYFLNF 254


>AC006757-3|AAF60541.2|  916|Caenorhabditis elegans Hypothetical
            protein Y40C7B.1 protein.
          Length = 916

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
 Frame = -2

Query: 212  YIHRNDMGLIDKQELFETLTTAVKLKNHSHIL*SRYYLDDP--QKALRYFVDF 60
            YI+R+  G IDK +  E +T+  K+K     +     +DD   ++ L+YF+ F
Sbjct: 864  YIYRDHCGEIDKSKFNEMVTSIWKVKYSFLTIDKTSDIDDGKFRRFLKYFIIF 916


>L14745-6|AAA27920.1|  173|Caenorhabditis elegans Hypothetical
           protein C02F5.5 protein.
          Length = 173

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 263 VYILAAFYGHAFFTLFFYIH 204
           V++     GHAFF+LF  +H
Sbjct: 102 VFVFLCVSGHAFFSLFVLVH 121


>AF047656-9|AAC05107.1|  184|Caenorhabditis elegans Hypothetical
           protein F17E9.5 protein.
          Length = 184

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 263 VYILAAFYGHAFFTLFFYIH 204
           +++     GHAFF+LF  IH
Sbjct: 121 IFVFLCVSGHAFFSLFVLIH 140


>AF016441-8|AAB65913.2|  212|Caenorhabditis elegans Hypothetical
           protein M03F8.6 protein.
          Length = 212

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = +2

Query: 2   HEAKIKKRLKYKLNIDFDEKNQR-NILTLSVGHLNN 106
           ++     R KY+  +D DEKN+    LTL +   NN
Sbjct: 121 YDGTFSLRQKYQATLDLDEKNKLFQDLTLVISSFNN 156


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,194,150
Number of Sequences: 27780
Number of extensions: 187434
Number of successful extensions: 381
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 381
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 820565746
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)