Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_K20
(488 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0217 - 1644696-1645034,1645143-1645214 141 3e-34
11_01_0348 - 2607315-2607424,2608634-2609030 139 1e-33
06_01_0428 + 3055163-3055573 139 1e-33
06_01_0427 - 3054204-3054614 139 1e-33
06_01_0423 - 3039527-3039937 139 1e-33
05_04_0449 - 21355439-21355849 139 1e-33
04_03_0909 + 20748653-20749063 139 1e-33
01_06_1456 + 37507156-37507566 139 1e-33
03_03_0212 + 15479850-15479921,15479965-15480083,15480175-154802... 126 1e-29
12_02_0048 - 12852335-12852745 113 9e-26
12_02_0047 - 12836779-12837189 108 3e-24
06_01_0425 - 3045557-3046004,3046852-3046856 105 3e-23
02_03_0107 - 15303890-15304060,15304158-15304248,15304505-153046... 102 2e-22
04_04_0062 + 22437653-22437724,22437866-22437943,22438222-22438392 95 2e-20
02_03_0108 - 15324922-15325092,15325189-15325279,15325511-15325596 91 3e-19
05_05_0297 - 23921648-23921758,23922011-23922089,23922774-239228... 65 2e-11
02_01_0611 - 4567839-4568144,4568280-4569209,4569301-4569566,456... 30 0.87
04_02_0033 - 8997041-8997754 29 1.5
05_04_0149 - 18441561-18442082,18442723-18442861,18443295-184433... 28 4.6
08_02_1339 + 26252609-26252925,26253025-26253227,26253379-262535... 27 6.1
04_01_0631 + 8381361-8381560,8381918-8382020,8382604-8383497 27 6.1
02_05_1052 + 33770355-33773981,33774217-33774336,33774880-337749... 27 6.1
01_01_1006 - 7972645-7973811 27 6.1
06_03_0787 + 24598823-24598973,24600213-24600534,24602499-24602808 27 8.1
01_07_0198 - 41918276-41918408,41918486-41918841,41919091-419192... 27 8.1
>06_01_0217 - 1644696-1645034,1645143-1645214
Length = 136
Score = 141 bits (341), Expect = 3e-34
Identities = 67/69 (97%), Positives = 69/69 (100%)
Frame = +2
Query: 89 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 268
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHRYRPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
Query: 269 LLIRKLPFQ 295
LLIRKLPFQ
Sbjct: 61 LLIRKLPFQ 69
Score = 102 bits (244), Expect = 2e-22
Identities = 49/53 (92%), Positives = 51/53 (96%)
Frame = +1
Query: 328 DFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARR 486
DFKTDLRFQS A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARR
Sbjct: 78 DFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARR 130
>11_01_0348 - 2607315-2607424,2608634-2609030
Length = 168
Score = 139 bits (337), Expect = 1e-33
Identities = 66/69 (95%), Positives = 69/69 (100%)
Frame = +2
Query: 89 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 268
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 269 LLIRKLPFQ 295
LLIRKLPFQ
Sbjct: 61 LLIRKLPFQ 69
Score = 105 bits (251), Expect = 3e-23
Identities = 49/53 (92%), Positives = 52/53 (98%)
Frame = +1
Query: 328 DFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARR 486
DFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARR
Sbjct: 78 DFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARR 130
>06_01_0428 + 3055163-3055573
Length = 136
Score = 139 bits (337), Expect = 1e-33
Identities = 66/69 (95%), Positives = 69/69 (100%)
Frame = +2
Query: 89 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 268
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 269 LLIRKLPFQ 295
LLIRKLPFQ
Sbjct: 61 LLIRKLPFQ 69
Score = 105 bits (251), Expect = 3e-23
Identities = 49/53 (92%), Positives = 52/53 (98%)
Frame = +1
Query: 328 DFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARR 486
DFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARR
Sbjct: 78 DFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARR 130
>06_01_0427 - 3054204-3054614
Length = 136
Score = 139 bits (337), Expect = 1e-33
Identities = 66/69 (95%), Positives = 69/69 (100%)
Frame = +2
Query: 89 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 268
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 269 LLIRKLPFQ 295
LLIRKLPFQ
Sbjct: 61 LLIRKLPFQ 69
Score = 105 bits (251), Expect = 3e-23
Identities = 49/53 (92%), Positives = 52/53 (98%)
Frame = +1
Query: 328 DFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARR 486
DFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARR
Sbjct: 78 DFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARR 130
>06_01_0423 - 3039527-3039937
Length = 136
Score = 139 bits (337), Expect = 1e-33
Identities = 66/69 (95%), Positives = 69/69 (100%)
Frame = +2
Query: 89 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 268
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 269 LLIRKLPFQ 295
LLIRKLPFQ
Sbjct: 61 LLIRKLPFQ 69
Score = 105 bits (251), Expect = 3e-23
Identities = 49/53 (92%), Positives = 52/53 (98%)
Frame = +1
Query: 328 DFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARR 486
DFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARR
Sbjct: 78 DFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARR 130
>05_04_0449 - 21355439-21355849
Length = 136
Score = 139 bits (337), Expect = 1e-33
Identities = 66/69 (95%), Positives = 69/69 (100%)
Frame = +2
Query: 89 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 268
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 269 LLIRKLPFQ 295
LLIRKLPFQ
Sbjct: 61 LLIRKLPFQ 69
Score = 105 bits (251), Expect = 3e-23
Identities = 49/53 (92%), Positives = 52/53 (98%)
Frame = +1
Query: 328 DFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARR 486
DFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARR
Sbjct: 78 DFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARR 130
>04_03_0909 + 20748653-20749063
Length = 136
Score = 139 bits (337), Expect = 1e-33
Identities = 66/69 (95%), Positives = 69/69 (100%)
Frame = +2
Query: 89 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 268
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 269 LLIRKLPFQ 295
LLIRKLPFQ
Sbjct: 61 LLIRKLPFQ 69
Score = 105 bits (251), Expect = 3e-23
Identities = 49/53 (92%), Positives = 52/53 (98%)
Frame = +1
Query: 328 DFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARR 486
DFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARR
Sbjct: 78 DFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARR 130
>01_06_1456 + 37507156-37507566
Length = 136
Score = 139 bits (337), Expect = 1e-33
Identities = 66/69 (95%), Positives = 69/69 (100%)
Frame = +2
Query: 89 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 268
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 269 LLIRKLPFQ 295
LLIRKLPFQ
Sbjct: 61 LLIRKLPFQ 69
Score = 105 bits (251), Expect = 3e-23
Identities = 49/53 (92%), Positives = 52/53 (98%)
Frame = +1
Query: 328 DFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARR 486
DFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARR
Sbjct: 78 DFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARR 130
>03_03_0212 +
15479850-15479921,15479965-15480083,15480175-15480265,
15480363-15480533
Length = 150
Score = 126 bits (304), Expect = 1e-29
Identities = 67/83 (80%), Positives = 69/83 (83%), Gaps = 14/83 (16%)
Frame = +2
Query: 89 MARTKQTARKSTGGKAPRKQLATK--------------AARKSAPSTGGVKKPHRYRPGT 226
MARTKQTARKSTGGKAPRKQLATK AARKSAP+TGGVKKPHRYRPGT
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKSDFDRWSYITISVQAARKSAPTTGGVKKPHRYRPGT 60
Query: 227 VALREIRRYQKSTELLIRKLPFQ 295
VALREIR+YQKSTELLIRKLPFQ
Sbjct: 61 VALREIRKYQKSTELLIRKLPFQ 83
Score = 102 bits (244), Expect = 2e-22
Identities = 49/53 (92%), Positives = 51/53 (96%)
Frame = +1
Query: 328 DFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARR 486
DFKTDLRFQS A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARR
Sbjct: 92 DFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARR 144
>12_02_0048 - 12852335-12852745
Length = 136
Score = 113 bits (271), Expect = 9e-26
Identities = 53/69 (76%), Positives = 58/69 (84%)
Frame = +2
Query: 89 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 268
MARTKQTA+KST PRK L K ARKSAP+ G+KKPHR++PGTVALREIR YQKSTE
Sbjct: 1 MARTKQTAKKSTASNVPRKLLVMKVARKSAPTMAGLKKPHRFKPGTVALREIRTYQKSTE 60
Query: 269 LLIRKLPFQ 295
LLIRKLPFQ
Sbjct: 61 LLIRKLPFQ 69
Score = 88.6 bits (210), Expect = 2e-18
Identities = 41/53 (77%), Positives = 48/53 (90%)
Frame = +1
Query: 328 DFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARR 486
D ++ +RFQS+A+ ALQEA+E YLVGLF+DTNLC IHAKRVTIMPKDIQLARR
Sbjct: 78 DVRSYVRFQSSAVVALQEAAETYLVGLFKDTNLCVIHAKRVTIMPKDIQLARR 130
>12_02_0047 - 12836779-12837189
Length = 136
Score = 108 bits (259), Expect = 3e-24
Identities = 52/69 (75%), Positives = 55/69 (79%)
Frame = +2
Query: 89 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 268
MARTKQTA+KST G PRK L K ARKSAP G+KKPHR+ P VALREIR YQKSTE
Sbjct: 1 MARTKQTAKKSTAGNVPRKLLVMKVARKSAPMMAGLKKPHRFNPWIVALREIRTYQKSTE 60
Query: 269 LLIRKLPFQ 295
LLIRKLPFQ
Sbjct: 61 LLIRKLPFQ 69
Score = 87.4 bits (207), Expect = 5e-18
Identities = 40/52 (76%), Positives = 46/52 (88%)
Frame = +1
Query: 328 DFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLAR 483
D ++ +RFQS+A+ LQEA+E YLVGLFEDTNLC IHAKRVTIMPKDIQLAR
Sbjct: 78 DIRSYVRFQSSAMAVLQEAAETYLVGLFEDTNLCVIHAKRVTIMPKDIQLAR 129
>06_01_0425 - 3045557-3046004,3046852-3046856
Length = 150
Score = 105 bits (251), Expect = 3e-23
Identities = 49/53 (92%), Positives = 52/53 (98%)
Frame = +1
Query: 328 DFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARR 486
DFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARR
Sbjct: 92 DFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARR 144
Score = 100 bits (240), Expect = 5e-22
Identities = 47/52 (90%), Positives = 50/52 (96%)
Frame = +2
Query: 140 RKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQ 295
RKQLATKA KSAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQ
Sbjct: 32 RKQLATKATCKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQ 83
>02_03_0107 -
15303890-15304060,15304158-15304248,15304505-15304614,
15304715-15304784,15306365-15306558
Length = 211
Score = 102 bits (244), Expect = 2e-22
Identities = 56/79 (70%), Positives = 60/79 (75%), Gaps = 10/79 (12%)
Frame = +2
Query: 89 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGV----------KKPHRYRPGTVALR 238
MARTKQTARKSTGGKAPRK L AA APS+ GV KKP R+RPGTVALR
Sbjct: 66 MARTKQTARKSTGGKAPRKPLRAIAAVMPAPSSRGVARKSVPFIGVKKPRRHRPGTVALR 125
Query: 239 EIRRYQKSTELLIRKLPFQ 295
EIR+YQK+TELLIRKLPFQ
Sbjct: 126 EIRKYQKNTELLIRKLPFQ 144
Score = 91.5 bits (217), Expect = 3e-19
Identities = 43/52 (82%), Positives = 48/52 (92%)
Frame = +1
Query: 331 FKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARR 486
FK D+RFQS A+ ALQEA+EAYLVGLFEDTNLCAIH+KRVTIM KD+QLARR
Sbjct: 154 FKHDMRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHSKRVTIMSKDVQLARR 205
>04_04_0062 + 22437653-22437724,22437866-22437943,22438222-22438392
Length = 106
Score = 95.5 bits (227), Expect = 2e-20
Identities = 46/50 (92%), Positives = 48/50 (96%)
Frame = +1
Query: 337 TDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARR 486
TDLRFQS A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARR
Sbjct: 51 TDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARR 100
Score = 91.5 bits (217), Expect = 3e-19
Identities = 45/65 (69%), Positives = 50/65 (76%)
Frame = +2
Query: 89 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 268
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHRY P R+Q
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYPPWKRCSSTDLRFQSHAV 60
Query: 269 LLIRK 283
L +++
Sbjct: 61 LALQE 65
>02_03_0108 - 15324922-15325092,15325189-15325279,15325511-15325596
Length = 115
Score = 91.5 bits (217), Expect = 3e-19
Identities = 43/52 (82%), Positives = 48/52 (92%)
Frame = +1
Query: 331 FKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARR 486
FK D+RFQS A+ ALQEA+EAYLVGLFEDTNLCAIH+KRVTIM KD+QLARR
Sbjct: 58 FKHDMRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHSKRVTIMSKDVQLARR 109
Score = 89.4 bits (212), Expect = 1e-18
Identities = 41/45 (91%), Positives = 43/45 (95%)
Frame = +2
Query: 161 AARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQ 295
AARKSAP GGVKKPHRYRPGTVALREIR+YQK+TELLIRKLPFQ
Sbjct: 4 AARKSAPCIGGVKKPHRYRPGTVALREIRKYQKNTELLIRKLPFQ 48
>05_05_0297 -
23921648-23921758,23922011-23922089,23922774-23922822,
23923180-23923255,23923693-23923767,23923862-23923992,
23924830-23924935
Length = 208
Score = 65.3 bits (152), Expect = 2e-11
Identities = 35/57 (61%), Positives = 43/57 (75%), Gaps = 2/57 (3%)
Frame = +1
Query: 322 VNDF--KTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARR 486
+ DF K R+ A+ ALQEA+E +LV +FE +NLCAIHAKRVTIM KD+QLARR
Sbjct: 83 ITDFYSKDVSRWTLEALLALQEAAEYHLVDIFEVSNLCAIHAKRVTIMQKDMQLARR 139
Score = 61.7 bits (143), Expect = 3e-10
Identities = 36/76 (47%), Positives = 47/76 (61%), Gaps = 8/76 (10%)
Frame = +2
Query: 89 MARTKQTARKSTGGKAPRKQLATKAARKS-APSTGGV-------KKPHRYRPGTVALREI 244
MARTK A + + + +K ++ R S A GG +KPHR+RPGTVALREI
Sbjct: 1 MARTKHPAVRKSKAEPKKKLQFERSPRPSKAQRAGGTPRQQTKQRKPHRFRPGTVALREI 60
Query: 245 RRYQKSTELLIRKLPF 292
R++QK+TELLI PF
Sbjct: 61 RKFQKTTELLIPFAPF 76
>02_01_0611 -
4567839-4568144,4568280-4569209,4569301-4569566,
4569662-4569970,4570497-4570647,4570958-4571012,
4571137-4571512,4571560-4571797,4571878-4572096,
4572629-4572910
Length = 1043
Score = 30.3 bits (65), Expect = 0.87
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +2
Query: 92 ARTKQTARKS-TGGKAPRKQLATKAARKSAPSTGGVKKPHRYRP 220
AR AR+ GG+ P + LA+ A SA + GG ++P + P
Sbjct: 14 ARAAAAARRHHAGGRDPLRALASLAGDASASAGGGARRPAWFAP 57
>04_02_0033 - 8997041-8997754
Length = 237
Score = 29.5 bits (63), Expect = 1.5
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 416 TPTFAPSMPNA*PLCLKTSSSPG 484
TPT PS PN P C++ +PG
Sbjct: 156 TPTATPSTPNGDPFCIRGVRTPG 178
>05_04_0149 -
18441561-18442082,18442723-18442861,18443295-18443352,
18443630-18443664,18444528-18444886,18445304-18445450,
18445849-18447954,18448300-18448494,18448629-18448709,
18448758-18448874,18449281-18449370,18449466-18449552,
18450293-18450315,18450675-18450804
Length = 1362
Score = 27.9 bits (59), Expect = 4.6
Identities = 19/73 (26%), Positives = 29/73 (39%)
Frame = -2
Query: 295 LERQLADQQLRRFLIATNFSKRYSTRAITMGFLNSTSTGCRFSRRFSSQLFARSFTSCRF 116
L L D+Q+R + NF+ G S +GCR F+ + + +C
Sbjct: 698 LVEALKDKQVRTVVCGINFTAAICIHKWVSGVDQSMCSGCRLP--FNLRRKRHNCYNCAL 755
Query: 115 TGCLLCTCHYSLK 77
C C+ SLK
Sbjct: 756 VFCHACSSKKSLK 768
>08_02_1339 +
26252609-26252925,26253025-26253227,26253379-26253536,
26253802-26253870,26253980-26254461,26254558-26254766,
26254865-26254901,26254991-26255075,26255186-26255269,
26255344-26255412,26255520-26255663
Length = 618
Score = 27.5 bits (58), Expect = 6.1
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +1
Query: 220 WYCSASRNSSLSKIYGVVDPQAAFPADFGSRKICV 324
W C + +IY V+D +F FG ICV
Sbjct: 391 WKCFIRSTADTHQIYPVLDSFTSFKDSFGRSLICV 425
>04_01_0631 + 8381361-8381560,8381918-8382020,8382604-8383497
Length = 398
Score = 27.5 bits (58), Expect = 6.1
Identities = 13/48 (27%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +1
Query: 280 QAAFPADFGSRKICVNDFKTDLRFQSAAIGALQ-EASEAYLVGLFEDT 420
+ PA+ G +K C ++ + F ++++G +A+ +LVG DT
Sbjct: 249 ECELPANKGEKKACATSLESMVDFVASSLGTRDIKAASTFLVGKDGDT 296
>02_05_1052 +
33770355-33773981,33774217-33774336,33774880-33774996,
33775322-33775411,33775971-33776078,33776304-33776351
Length = 1369
Score = 27.5 bits (58), Expect = 6.1
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +2
Query: 107 TARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALR 238
T+ ++ G +PR++LA+ ST K HR + ALR
Sbjct: 737 TSSMASRGTSPRRRLASDGVNALLKSTDFTDKDHRPSTSSAALR 780
>01_01_1006 - 7972645-7973811
Length = 388
Score = 27.5 bits (58), Expect = 6.1
Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = -3
Query: 222 PGR*RWGFLTPPVLGADFRAALVANCLRGAL--PPVDLRAVCFVRA 91
PG + FL V G D RA V C A+ PP+ + FVRA
Sbjct: 333 PGEVAYFFLHSRVFGVDLRACSVLECEFFAMLNPPMRYHSSRFVRA 378
>06_03_0787 + 24598823-24598973,24600213-24600534,24602499-24602808
Length = 260
Score = 27.1 bits (57), Expect = 8.1
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -3
Query: 480 GELDVFRHNGYAFGMDGAKVG 418
G+LD+FR+ Y G+ GA G
Sbjct: 58 GDLDIFRYGRYTAGVSGALFG 78
>01_07_0198 -
41918276-41918408,41918486-41918841,41919091-41919237,
41919666-41921789,41922150-41922344,41922488-41922568,
41923325-41923414,41923507-41923593,41923914-41923961
Length = 1086
Score = 27.1 bits (57), Expect = 8.1
Identities = 19/73 (26%), Positives = 30/73 (41%)
Frame = -2
Query: 295 LERQLADQQLRRFLIATNFSKRYSTRAITMGFLNSTSTGCRFSRRFSSQLFARSFTSCRF 116
L L D+Q+R + NF+ G S +GCR + F+ + + +C
Sbjct: 624 LVEALKDKQVRSVVCGINFTAAICIHKWVSGSDQSMCSGCR--QPFNLRRKRHNCYNCAL 681
Query: 115 TGCLLCTCHYSLK 77
C C+ SLK
Sbjct: 682 VFCHSCSSKKSLK 694
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,121,903
Number of Sequences: 37544
Number of extensions: 291307
Number of successful extensions: 896
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 893
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1011709100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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