Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_K18
(428 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0737 - 31328473-31330513,31331015-31331184 163 4e-41
08_01_0471 - 4147170-4149207,4150535-4150692 160 5e-40
04_04_1339 + 32760424-32760584,32762428-32764462 158 2e-39
03_06_0221 + 32458867-32459149,32460271-32460386,32460461-324608... 118 3e-27
05_01_0355 - 2774217-2774318,2774608-2774775,2774872-2775090,277... 95 2e-20
01_04_0017 - 15113479-15113580,15113950-15114117,15115011-151152... 93 7e-20
01_04_0018 + 15128174-15128316,15128445-15128544,15129573-151297... 90 6e-19
02_05_0348 - 28162681-28162849,28162946-28163154 31 0.52
04_01_0137 - 1549562-1550213,1553363-1553896,1554524-1554606 29 1.2
04_04_0287 - 24156285-24156389,24156477-24156596,24156654-241567... 29 2.1
08_01_1049 - 10627636-10628041,10630972-10631115,10631205-106318... 28 2.8
10_07_0100 + 12861588-12862601 28 3.7
03_02_0034 - 5166987-5167010,5167596-5167659,5168071-5168174,516... 27 4.9
01_01_0409 - 3084821-3084988,3085069-3085155,3085270-3085476,308... 27 4.9
09_04_0082 + 14408962-14409436,14413356-14413780,14414067-14414528 27 8.5
03_02_0774 + 11074508-11074880,11076270-11076370,11076453-110765... 27 8.5
>02_05_0737 - 31328473-31330513,31331015-31331184
Length = 736
Score = 163 bits (397), Expect = 4e-41
Identities = 83/135 (61%), Positives = 105/135 (77%)
Frame = +3
Query: 6 RETDIPEKDLVRALQSLAMGKPTQRILIKHPKTKDIEQSHQFYVNDAFTSKLHRVKIQTV 185
++T IP DL R LQSLA K + +L K P +KDI + FY ND FTSKL +VKI TV
Sbjct: 588 QDTAIPASDLKRCLQSLACVKG-KNVLRKEPMSKDISEDDTFYFNDKFTSKLVKVKIGTV 646
Query: 186 AAKGESEPERRETRNKVDEDRKHEIEAAIVRIMKARKKMAHTLLVAEVTEQLRARFLPSP 365
A+ ESEPE++ETR +V+EDRK +IEAAIVRIMK+R+ + H +VAEVT+QL+ARF+P+P
Sbjct: 647 VAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNSIVAEVTKQLQARFMPNP 706
Query: 366 VVIKKRIEGLIEREY 410
VVIKKRIE LIERE+
Sbjct: 707 VVIKKRIESLIEREF 721
>08_01_0471 - 4147170-4149207,4150535-4150692
Length = 731
Score = 160 bits (388), Expect = 5e-40
Identities = 80/133 (60%), Positives = 101/133 (75%)
Frame = +3
Query: 12 TDIPEKDLVRALQSLAMGKPTQRILIKHPKTKDIEQSHQFYVNDAFTSKLHRVKIQTVAA 191
T IP DL R LQSLA+ K + +L K P ++DI FYVND FTSKL +VKI TVA
Sbjct: 585 TAIPSADLKRCLQSLALVKG-KNVLRKEPMSRDISDDDNFYVNDKFTSKLFKVKIGTVAT 643
Query: 192 KGESEPERRETRNKVDEDRKHEIEAAIVRIMKARKKMAHTLLVAEVTEQLRARFLPSPVV 371
+ ESEPE+ ETR +V+EDRK +IEAAIVRIMK+R+ + H +V EVT+QL+ RF+P+PVV
Sbjct: 644 QKESEPEKMETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNSIVTEVTKQLQPRFMPNPVV 703
Query: 372 IKKRIEGLIEREY 410
IKKR+E LIERE+
Sbjct: 704 IKKRVESLIEREF 716
>04_04_1339 + 32760424-32760584,32762428-32764462
Length = 731
Score = 158 bits (383), Expect = 2e-39
Identities = 80/133 (60%), Positives = 101/133 (75%)
Frame = +3
Query: 12 TDIPEKDLVRALQSLAMGKPTQRILIKHPKTKDIEQSHQFYVNDAFTSKLHRVKIQTVAA 191
T IP DL R LQSLA K + +L K P +KDI + FY ND FTSKL +VKI TV A
Sbjct: 585 TGIPHADLKRCLQSLACVKG-KNVLRKEPMSKDISEDDTFYYNDKFTSKLVKVKIGTVVA 643
Query: 192 KGESEPERRETRNKVDEDRKHEIEAAIVRIMKARKKMAHTLLVAEVTEQLRARFLPSPVV 371
+ E+EPE+ ETR +V+EDRK +IEAAIVRIMK+R+ + H ++ EVT+QL++RFLP+PVV
Sbjct: 644 QKETEPEKLETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNSIITEVTKQLQSRFLPNPVV 703
Query: 372 IKKRIEGLIEREY 410
IKKRIE LIERE+
Sbjct: 704 IKKRIESLIEREF 716
>03_06_0221 + 32458867-32459149,32460271-32460386,32460461-32460807,
32461231-32461411,32461507-32461629,32461828-32462115,
32462536-32462688,32463068-32463169,32463260-32463313,
32463518-32463624,32463867-32463927,32464019-32464150,
32464245-32464382,32464459-32464539,32464635-32464715,
32465133-32465213,32465300-32465413
Length = 813
Score = 118 bits (283), Expect = 3e-27
Identities = 62/133 (46%), Positives = 90/133 (67%)
Frame = +3
Query: 12 TDIPEKDLVRALQSLAMGKPTQRILIKHPKTKDIEQSHQFYVNDAFTSKLHRVKIQTVAA 191
T I +K+L R LQSLA GK R+L K PK +D+E +F N+ F++ L+R+K+ +
Sbjct: 671 TGIEDKELRRTLQSLACGKV--RVLQKMPKGRDVEDKDEFVFNEEFSAPLYRIKVNAIQM 728
Query: 192 KGESEPERRETRNKVDEDRKHEIEAAIVRIMKARKKMAHTLLVAEVTEQLRARFLPSPVV 371
K E+ E T +V +DR+++++AAIVRIMK RK ++HTLL+ E+ +QL+ PS
Sbjct: 729 K-ETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQLKFPIKPSD-- 785
Query: 372 IKKRIEGLIEREY 410
IKKRIE LI+REY
Sbjct: 786 IKKRIESLIDREY 798
>05_01_0355 -
2774217-2774318,2774608-2774775,2774872-2775090,
2775176-2775319,2775485-2775767,2775874-2775929,
2776012-2776161,2776254-2776340,2776414-2776449,
2777100-2777162,2777247-2777327,2777407-2777496,
2777690-2777767,2777855-2778058,2778139-2778186,
2778262-2778447,2779879-2779978,2780121-2780260
Length = 744
Score = 95.1 bits (226), Expect = 2e-20
Identities = 55/134 (41%), Positives = 77/134 (57%)
Frame = +3
Query: 9 ETDIPEKDLVRALQSLAMGKPTQRILIKHPKTKDIEQSHQFYVNDAFTSKLHRVKIQTVA 188
+ ++ + D+VR L SL+ K +IL K P + I + F N FT ++ R+KI
Sbjct: 603 QLNLSDDDVVRLLHSLSCAK--YKILNKEPANRSISPNDVFEFNSKFTDRMRRIKIPLPP 660
Query: 189 AKGESEPERRETRNKVDEDRKHEIEAAIVRIMKARKKMAHTLLVAEVTEQLRARFLPSPV 368
E+++ VD+DR++ I+A+IVRIMK+RK M H LVAE EQL F P
Sbjct: 661 VD-----EKKKVVEDVDKDRRYAIDASIVRIMKSRKVMGHQQLVAECVEQLSRMFKPDFK 715
Query: 369 VIKKRIEGLIEREY 410
IKKRIE LI R+Y
Sbjct: 716 AIKKRIEDLITRDY 729
>01_04_0017 -
15113479-15113580,15113950-15114117,15115011-15115229,
15115303-15115446,15115558-15115840,15115936-15115991,
15116067-15116216,15116299-15116385,15116463-15116498,
15116746-15116808,15116887-15116967,15117053-15117142,
15117349-15117426,15117510-15117731,15117788-15117835,
15117948-15118133,15120910-15121009,15121107-15121246
Length = 750
Score = 93.5 bits (222), Expect = 7e-20
Identities = 55/134 (41%), Positives = 76/134 (56%)
Frame = +3
Query: 9 ETDIPEKDLVRALQSLAMGKPTQRILIKHPKTKDIEQSHQFYVNDAFTSKLHRVKIQTVA 188
+ ++ + D+VR L SL+ K +IL K P + I + F N FT KL R+KI
Sbjct: 609 QLNLSDDDVVRLLHSLSCAK--YKILSKEPNNRSISPNDVFEFNSKFTDKLRRLKIPLPP 666
Query: 189 AKGESEPERRETRNKVDEDRKHEIEAAIVRIMKARKKMAHTLLVAEVTEQLRARFLPSPV 368
E+++ VD+DR++ I+A+IVRIMK+RK + H LV E EQL F P
Sbjct: 667 VD-----EKKKVVEDVDKDRRYAIDASIVRIMKSRKVLGHQQLVMECVEQLGRMFKPDFK 721
Query: 369 VIKKRIEGLIEREY 410
IKKRIE LI R+Y
Sbjct: 722 AIKKRIEDLITRDY 735
>01_04_0018 +
15128174-15128316,15128445-15128544,15129573-15129758,
15129877-15129924,15130006-15130209,15130476-15130565,
15130667-15130747,15130827-15130889,15131794-15131832,
15131914-15132000,15132103-15132252,15132331-15132386,
15132493-15132775,15132989-15133132,15133233-15133451,
15133528-15133695,15133868-15133969
Length = 720
Score = 90.2 bits (214), Expect = 6e-19
Identities = 51/131 (38%), Positives = 75/131 (57%)
Frame = +3
Query: 18 IPEKDLVRALQSLAMGKPTQRILIKHPKTKDIEQSHQFYVNDAFTSKLHRVKIQTVAAKG 197
+ + D VR L SL+ K +IL K P + I +F N FT ++ R+K+
Sbjct: 582 LSDDDAVRLLHSLSCAK--YKILNKEPSNRVISPEDEFEFNSKFTDRMRRIKVPLPQID- 638
Query: 198 ESEPERRETRNKVDEDRKHEIEAAIVRIMKARKKMAHTLLVAEVTEQLRARFLPSPVVIK 377
E+++ + V++DR+ I+A++VRIMK+RK + H LVAE EQL F P +IK
Sbjct: 639 ----EKKKVVDDVNKDRRFAIDASLVRIMKSRKVLGHQQLVAECVEQLSRMFKPDIKIIK 694
Query: 378 KRIEGLIEREY 410
+RIE LI REY
Sbjct: 695 RRIEDLISREY 705
>02_05_0348 - 28162681-28162849,28162946-28163154
Length = 125
Score = 30.7 bits (66), Expect = 0.52
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +3
Query: 117 QSHQFYVNDAFTSKLHRVKIQTVAAKGESEPERRET 224
+ Q +DA R K+Q AA+GE +P+RR++
Sbjct: 81 RQRQIDADDASEMMKKRAKMQPAAARGEQQPQRRQS 116
>04_01_0137 - 1549562-1550213,1553363-1553896,1554524-1554606
Length = 422
Score = 29.5 bits (63), Expect = 1.2
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 8/73 (10%)
Frame = -1
Query: 236 DFVSRFASFRLRLALSGHRLDLNSMQLGGEGVIDIELVR----LFN----VFSFGMLDEY 81
DF ++ A F L + + L + +G +G ID + ++ FN V+SFG+
Sbjct: 243 DFNAKLADFGLSRVANPNNATLKTTAIGSQGYIDPQCMKDGEVSFNRNSDVYSFGIALLE 302
Query: 80 SLCGFAHRQRLQG 42
+C HR+++ G
Sbjct: 303 IVCARKHREQIWG 315
>04_04_0287 -
24156285-24156389,24156477-24156596,24156654-24156740,
24156905-24157057,24157516-24157635,24157788-24157949,
24158029-24158247,24158574-24158616,24159147-24159210,
24159353-24159458,24159585-24159704,24159831-24159911,
24160008-24160050,24160308-24160369,24160477-24160563,
24161004-24161050,24161144-24161276,24161419-24161487,
24161924-24162010,24162317-24162448
Length = 679
Score = 28.7 bits (61), Expect = 2.1
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +3
Query: 171 KIQTVAAKGESEPERRETRNKVDEDRKHEIEAAIVRIMK--ARKKMAH 308
K + AKGE + RRE R +ED +I+A + I K A+KK H
Sbjct: 14 KTERKTAKGEEKRARREARKVGEED---DIDAILRSIQKEEAKKKEVH 58
>08_01_1049 -
10627636-10628041,10630972-10631115,10631205-10631869,
10632709-10633110
Length = 538
Score = 28.3 bits (60), Expect = 2.8
Identities = 12/38 (31%), Positives = 25/38 (65%)
Frame = +3
Query: 192 KGESEPERRETRNKVDEDRKHEIEAAIVRIMKARKKMA 305
KG+++ + +ET+ KV E+ E E V +++A+++ A
Sbjct: 71 KGKAKEKEKETKVKVKEEGGEEKEKGKVEVVEAKRRPA 108
>10_07_0100 + 12861588-12862601
Length = 337
Score = 27.9 bits (59), Expect = 3.7
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -3
Query: 72 WVCPSPATAGRGRDPSRVYQSPS 4
W P+PA GRGR R PS
Sbjct: 8 WAAPAPAARGRGRARRRAPDQPS 30
>03_02_0034 -
5166987-5167010,5167596-5167659,5168071-5168174,
5168685-5168829,5168914-5169055,5169432-5169751,
5169895-5170196,5170603-5170647,5171218-5171268,
5171374-5171460,5171587-5171764,5172453-5172528,
5173018-5173234,5173604-5173909
Length = 686
Score = 27.5 bits (58), Expect = 4.9
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +3
Query: 195 GESEPERRETRNKVDEDRKHEIEAAIVRIMKARKKMAHTLLVAEVTEQLRARFLPS--PV 368
GE+ PER++ + K K + R+ +AR + A LL + L+A+ L P
Sbjct: 68 GEASPERKKRKRKRQRQPKPRELNEVERMAEARHQEARPLLSSAHKSLLKAKDLLEFLPR 127
Query: 369 VIKKRIEGL 395
+IK+ + L
Sbjct: 128 MIKEDVRML 136
>01_01_0409 -
3084821-3084988,3085069-3085155,3085270-3085476,
3085904-3085985,3086085-3086275,3086410-3086616,
3086709-3086871,3087905-3087960,3088035-3088148,
3088599-3089807
Length = 827
Score = 27.5 bits (58), Expect = 4.9
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 7/54 (12%)
Frame = +3
Query: 144 AFTSKLHRVKIQ---TVAAKGESEPERRETRNK----VDEDRKHEIEAAIVRIM 284
A S+LH KIQ T A + E+ P+RR+ RN+ V+ + EI+A ++ +
Sbjct: 729 AADSELHLRKIQEIKTPAVEVENVPKRRKRRNRGQESVESSKFQEIKAVALKFL 782
>09_04_0082 + 14408962-14409436,14413356-14413780,14414067-14414528
Length = 453
Score = 26.6 bits (56), Expect = 8.5
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +3
Query: 201 SEPERRETRNKVDEDRKHEIEAAIVRIMKARKKMAHTLLV 320
S+ ERR R ++ R+HE+ + R + + AHT ++
Sbjct: 163 SDGERRRRREELTWARRHEVVVGVARGLLYLHEDAHTPII 202
>03_02_0774 +
11074508-11074880,11076270-11076370,11076453-11076509,
11076596-11076690,11077480-11077579,11078272-11078330,
11078874-11079001,11079362-11079440,11079708-11079795,
11080490-11080590,11080822-11080900,11081740-11081850,
11082655-11082750,11082885-11083007,11085750-11085947,
11086071-11086172,11086570-11086634,11086888-11087008,
11088540-11088697,11088823-11088973,11089414-11089521,
11089939-11090031,11090285-11090321,11090659-11090906,
11091396-11091542,11091929-11092099,11092166-11092175,
11093360-11093505
Length = 1114
Score = 26.6 bits (56), Expect = 8.5
Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Frame = +3
Query: 81 ILIKHPKTKDIEQSHQFYVNDAFTSKLHRV-----KIQTVAAKGES 203
+L++HP +Q YV D++ K+ R+ K+ T+A G +
Sbjct: 806 VLLQHPLGVVYASDNQIYVADSYNHKIKRLDPVTRKVTTIAGTGRA 851
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,070,911
Number of Sequences: 37544
Number of extensions: 175679
Number of successful extensions: 764
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 760
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 802495716
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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