Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_K18
         (428 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     23   1.9  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   1.9  
S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor prot...    22   2.5  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    22   3.3  
DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    22   3.3  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    21   5.8  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   5.8  

>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -1

Query: 257 FVFPILVDFVSRFASFR 207
           FV PI++ F++ F SFR
Sbjct: 229 FVIPIMLLFLAFFVSFR 245


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -3

Query: 63   PSPATAGRGRDPSR 22
            P PAT G+G  P R
Sbjct: 1024 PKPATGGKGTRPKR 1037


>S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor
           protein.
          Length = 90

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -1

Query: 149 EGVIDIELVRLFNVFSFGML 90
           EGVI +    LF+VFSF +L
Sbjct: 55  EGVIVLAFSGLFSVFSFLIL 74


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 31  ISSAPCSRWRWANPHREYSS 90
           I++APC   R  +PH E  S
Sbjct: 367 INTAPCGDARIFSPHEENES 386


>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 11/47 (23%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
 Frame = +3

Query: 108 DIEQSHQFYVN-DAFTSKLHRVKIQTVAAKGESEPERRETRNKVDED 245
           D+E   Q   + D     + + ++    +K   E   ++ +NK DED
Sbjct: 175 DVESYKQIKSDLDVLRQSVEKSELWVYKSKASEEHGNKKKKNKEDED 221


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = +3

Query: 99  KTKDIEQSHQFYVNDAFTSKLHRVKIQTVAAKGESEPERR 218
           K + +E S   + N     K+H     + AA GE   +RR
Sbjct: 391 KMEVMELSDLHHPNCKINRKVHHTTSSSSAAGGEGLADRR 430


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = -2

Query: 271 IAASISCFRSSSTLFLVSRRSGSDSPLAATV 179
           +A    C     TL  V+   GS++  AATV
Sbjct: 664 VACETFCLDDDDTLLEVALSLGSEALSAATV 694


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,789
Number of Sequences: 438
Number of extensions: 1817
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11121030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)