Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_K17
(573 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L05092-1|AAC15856.1| 178|Homo sapiens ribosomal protein L11 pro... 312 8e-85
BC018970-1|AAH18970.1| 177|Homo sapiens ribosomal protein L11 p... 312 8e-85
AL451000-3|CAH71472.1| 178|Homo sapiens ribosomal protein L11 p... 312 8e-85
AF432212-1|AAL99919.1| 176|Homo sapiens CLL-associated antigen ... 312 8e-85
AF101385-1|AAD20460.3| 177|Homo sapiens ribosomal protein L11 p... 312 8e-85
AY871274-1|AAX11430.1| 177|Homo sapiens cell growth-inhibiting ... 310 3e-84
X79234-1|CAA55816.1| 178|Homo sapiens ribosomal protein L11 pro... 302 6e-82
AL451000-5|CAH71474.1| 174|Homo sapiens ribosomal protein L11 p... 298 8e-81
AL451000-4|CAH71473.1| 131|Homo sapiens ribosomal protein L11 p... 243 4e-64
AB007171-1|BAA25831.1| 36|Homo sapiens ribosomal protein L11 p... 75 2e-13
AF134477-1|AAP97254.1| 612|Homo sapiens cytoplasmic dynein inte... 32 1.6
U31973-1|AAA96392.1| 858|Homo sapiens phosphodiesterase A' subu... 31 2.9
U20212-1|AAA92886.1| 858|Homo sapiens cone photoreceptor cGMP-p... 31 2.9
AL356214-7|CAH72330.1| 858|Homo sapiens phosphodiesterase 6C, c... 31 2.9
AL157396-4|CAH73839.1| 858|Homo sapiens phosphodiesterase 6C, c... 31 2.9
AK128030-1|BAC87237.1| 2427|Homo sapiens protein ( Homo sapiens ... 30 5.0
AK126463-1|BAC86558.1| 559|Homo sapiens protein ( Homo sapiens ... 30 5.0
AF143946-1|AAD39760.1| 2971|Homo sapiens transcriptional activat... 30 5.0
AB002307-1|BAA20768.2| 3053|Homo sapiens KIAA0309 protein. 30 5.0
BX537412-1|CAD97654.1| 612|Homo sapiens hypothetical protein pr... 30 6.7
BT007130-1|AAP35794.1| 612|Homo sapiens dynein, cytoplasmic, in... 30 6.7
BC109375-1|AAI09376.1| 612|Homo sapiens DYNC1I2 protein protein. 30 6.7
BC091498-1|AAH91498.1| 612|Homo sapiens DYNC1I2 protein protein. 30 6.7
BC015038-1|AAH15038.1| 612|Homo sapiens DYNC1I2 protein protein. 30 6.7
AL137519-1|CAB70785.1| 429|Homo sapiens hypothetical protein pr... 30 6.7
AK055491-1|BAB70932.1| 638|Homo sapiens protein ( Homo sapiens ... 30 6.7
AK026574-1|BAB15502.1| 321|Homo sapiens protein ( Homo sapiens ... 30 6.7
AF250307-1|AAK37426.1| 612|Homo sapiens cytoplasmic dynein inte... 30 6.7
AC068039-1|AAY24133.1| 562|Homo sapiens unknown protein. 30 6.7
AB209014-1|BAD92251.1| 575|Homo sapiens dynein, cytoplasmic, in... 30 6.7
>L05092-1|AAC15856.1| 178|Homo sapiens ribosomal protein L11
protein.
Length = 178
Score = 312 bits (765), Expect = 8e-85
Identities = 144/167 (86%), Positives = 157/167 (94%)
Frame = +1
Query: 73 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 252
MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKIAVH
Sbjct: 12 MRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVH 71
Query: 253 CTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFY 432
CTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIYGLDFY
Sbjct: 72 CTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLDFY 131
Query: 433 VVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDGIILNSK 573
VVLGRPGF++A ++R+TG +G HR++KE+AM+WFQQKYDGIIL K
Sbjct: 132 VVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDGIILPGK 178
>BC018970-1|AAH18970.1| 177|Homo sapiens ribosomal protein L11
protein.
Length = 177
Score = 312 bits (765), Expect = 8e-85
Identities = 144/167 (86%), Positives = 157/167 (94%)
Frame = +1
Query: 73 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 252
MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKIAVH
Sbjct: 11 MRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVH 70
Query: 253 CTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFY 432
CTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIYGLDFY
Sbjct: 71 CTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLDFY 130
Query: 433 VVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDGIILNSK 573
VVLGRPGF++A ++R+TG +G HR++KE+AM+WFQQKYDGIIL K
Sbjct: 131 VVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDGIILPGK 177
>AL451000-3|CAH71472.1| 178|Homo sapiens ribosomal protein L11
protein.
Length = 178
Score = 312 bits (765), Expect = 8e-85
Identities = 144/167 (86%), Positives = 157/167 (94%)
Frame = +1
Query: 73 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 252
MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKIAVH
Sbjct: 12 MRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVH 71
Query: 253 CTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFY 432
CTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIYGLDFY
Sbjct: 72 CTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLDFY 131
Query: 433 VVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDGIILNSK 573
VVLGRPGF++A ++R+TG +G HR++KE+AM+WFQQKYDGIIL K
Sbjct: 132 VVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDGIILPGK 178
>AF432212-1|AAL99919.1| 176|Homo sapiens CLL-associated antigen
KW-12 protein.
Length = 176
Score = 312 bits (765), Expect = 8e-85
Identities = 144/167 (86%), Positives = 157/167 (94%)
Frame = +1
Query: 73 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 252
MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKIAVH
Sbjct: 10 MRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVH 69
Query: 253 CTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFY 432
CTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIYGLDFY
Sbjct: 70 CTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLDFY 129
Query: 433 VVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDGIILNSK 573
VVLGRPGF++A ++R+TG +G HR++KE+AM+WFQQKYDGIIL K
Sbjct: 130 VVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDGIILPGK 176
>AF101385-1|AAD20460.3| 177|Homo sapiens ribosomal protein L11
protein.
Length = 177
Score = 312 bits (765), Expect = 8e-85
Identities = 144/167 (86%), Positives = 157/167 (94%)
Frame = +1
Query: 73 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 252
MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKIAVH
Sbjct: 11 MRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVH 70
Query: 253 CTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFY 432
CTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIYGLDFY
Sbjct: 71 CTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLDFY 130
Query: 433 VVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDGIILNSK 573
VVLGRPGF++A ++R+TG +G HR++KE+AM+WFQQKYDGIIL K
Sbjct: 131 VVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDGIILPGK 177
>AY871274-1|AAX11430.1| 177|Homo sapiens cell growth-inhibiting
protein 34 protein.
Length = 177
Score = 310 bits (760), Expect = 3e-84
Identities = 143/167 (85%), Positives = 156/167 (93%)
Frame = +1
Query: 73 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 252
MR L IRKLCLNICVGESGDRL RAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKIAVH
Sbjct: 11 MRELRIRKLCLNICVGESGDRLARAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVH 70
Query: 253 CTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFY 432
CTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIYGLDFY
Sbjct: 71 CTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLDFY 130
Query: 433 VVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDGIILNSK 573
VVLGRPGF++A ++R+TG +G HR++KE+AM+WFQQKYDGIIL K
Sbjct: 131 VVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDGIILPGK 177
>X79234-1|CAA55816.1| 178|Homo sapiens ribosomal protein L11
protein.
Length = 178
Score = 302 bits (741), Expect = 6e-82
Identities = 140/167 (83%), Positives = 154/167 (92%)
Frame = +1
Query: 73 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 252
MR L IRKLCLNICVGESG RLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKIAVH
Sbjct: 12 MRELRIRKLCLNICVGESGGRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVH 71
Query: 253 CTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFY 432
C VRGAKAEEILE+GLKVRE ELR++NFS TGNFGFGIQEHIDLGI+YDPSIGIYGLDFY
Sbjct: 72 CAVRGAKAEEILEKGLKVRELELRKNNFSDTGNFGFGIQEHIDLGIEYDPSIGIYGLDFY 131
Query: 433 VVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDGIILNSK 573
VVLGRPGF++A ++R+TG +G HR++KE+AM+WFQQKYDGIIL K
Sbjct: 132 VVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDGIILPGK 178
>AL451000-5|CAH71474.1| 174|Homo sapiens ribosomal protein L11
protein.
Length = 174
Score = 298 bits (732), Expect = 8e-81
Identities = 139/164 (84%), Positives = 152/164 (92%)
Frame = +1
Query: 73 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 252
MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKIAVH
Sbjct: 10 MRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVH 69
Query: 253 CTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFY 432
CTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIYGLDFY
Sbjct: 70 CTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLDFY 129
Query: 433 VVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDGIIL 564
VVLGRPGF++A ++R+TG +G HR++KE+AM+WFQQK I L
Sbjct: 130 VVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKVKLIYL 173
>AL451000-4|CAH71473.1| 131|Homo sapiens ribosomal protein L11
protein.
Length = 131
Score = 243 bits (594), Expect = 4e-64
Identities = 115/122 (94%), Positives = 118/122 (96%)
Frame = +1
Query: 73 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 252
MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKIAVH
Sbjct: 10 MRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVH 69
Query: 253 CTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFY 432
CTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIYGLDFY
Sbjct: 70 CTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLDFY 129
Query: 433 VV 438
VV
Sbjct: 130 VV 131
>AB007171-1|BAA25831.1| 36|Homo sapiens ribosomal protein L11
protein.
Length = 36
Score = 74.9 bits (176), Expect = 2e-13
Identities = 35/36 (97%), Positives = 35/36 (97%)
Frame = +1
Query: 88 IRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSK 195
IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSK
Sbjct: 1 IRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSK 36
>AF134477-1|AAP97254.1| 612|Homo sapiens cytoplasmic dynein
intermediate chain 2C protein.
Length = 612
Score = 31.9 bits (69), Expect = 1.6
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = -1
Query: 534 PLHGVFFCQTMGESNFASL--TSSMSY-IETWSTKNNVEIQTIDTNRWIIFD 388
P+ G+ +G +F+ L TSS + ++ WSTKNN + + + N ++D
Sbjct: 452 PITGIHCHAAVGAVDFSHLFVTSSFDWTVKLWSTKNNKPLYSFEDNAGYVYD 503
>U31973-1|AAA96392.1| 858|Homo sapiens phosphodiesterase A' subunit
protein.
Length = 858
Score = 31.1 bits (67), Expect = 2.9
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +1
Query: 70 VMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSF 219
++ LH NI S + A KV E+LT + F KA YTVRS+
Sbjct: 222 IILRLHHTSYMYNIESRRSQILMWSANKVFEELTDVERQFHKALYTVRSY 271
>U20212-1|AAA92886.1| 858|Homo sapiens cone photoreceptor
cGMP-phosphodiesterase alpha' subunit protein.
Length = 858
Score = 31.1 bits (67), Expect = 2.9
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +1
Query: 70 VMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSF 219
++ LH NI S + A KV E+LT + F KA YTVRS+
Sbjct: 222 IILRLHHTSYMYNIESRRSQILMWSANKVFEELTDVERQFHKALYTVRSY 271
>AL356214-7|CAH72330.1| 858|Homo sapiens phosphodiesterase 6C,
cGMP-specific, cone, alpha prime protein.
Length = 858
Score = 31.1 bits (67), Expect = 2.9
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +1
Query: 70 VMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSF 219
++ LH NI S + A KV E+LT + F KA YTVRS+
Sbjct: 222 IILRLHHTSYMYNIESRRSQILMWSANKVFEELTDVERQFHKALYTVRSY 271
>AL157396-4|CAH73839.1| 858|Homo sapiens phosphodiesterase 6C,
cGMP-specific, cone, alpha prime protein.
Length = 858
Score = 31.1 bits (67), Expect = 2.9
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +1
Query: 70 VMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSF 219
++ LH NI S + A KV E+LT + F KA YTVRS+
Sbjct: 222 IILRLHHTSYMYNIESRRSQILMWSANKVFEELTDVERQFHKALYTVRSY 271
>AK128030-1|BAC87237.1| 2427|Homo sapiens protein ( Homo sapiens cDNA
FLJ46149 fis, clone TESTI4000621, moderately similar to
Homo sapiens Snf2-related CBP activator protein (SRCAP).
).
Length = 2427
Score = 30.3 bits (65), Expect = 5.0
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = -2
Query: 401 GSYLIPKSMCSWIPKPKLPVAEKLSRLNSYSLTFNPLSRISSALAPRTVQ 252
G L P S P P L A + +++LT P S +S LAP +VQ
Sbjct: 1737 GPPLGPTQTLSLAPAPPLAPASPVGPAPAHTLTLAPASSSASLLAPASVQ 1786
>AK126463-1|BAC86558.1| 559|Homo sapiens protein ( Homo sapiens
cDNA FLJ44499 fis, clone UTERU3000665, highly similar
to Homo sapiens Snf2-related CBP activator protein
(SRCAP). ).
Length = 559
Score = 30.3 bits (65), Expect = 5.0
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = -2
Query: 401 GSYLIPKSMCSWIPKPKLPVAEKLSRLNSYSLTFNPLSRISSALAPRTVQ 252
G L P S P P L A + +++LT P S +S LAP +VQ
Sbjct: 386 GPPLGPTQTLSLAPAPPLAPASPVGPAPAHTLTLAPASSSASLLAPASVQ 435
>AF143946-1|AAD39760.1| 2971|Homo sapiens transcriptional activator
SRCAP protein.
Length = 2971
Score = 30.3 bits (65), Expect = 5.0
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = -2
Query: 401 GSYLIPKSMCSWIPKPKLPVAEKLSRLNSYSLTFNPLSRISSALAPRTVQ 252
G L P S P P L A + +++LT P S +S LAP +VQ
Sbjct: 1478 GPPLGPTQTLSLAPAPPLAPASPVGPAPAHTLTLAPASSSASLLAPASVQ 1527
>AB002307-1|BAA20768.2| 3053|Homo sapiens KIAA0309 protein.
Length = 3053
Score = 30.3 bits (65), Expect = 5.0
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = -2
Query: 401 GSYLIPKSMCSWIPKPKLPVAEKLSRLNSYSLTFNPLSRISSALAPRTVQ 252
G L P S P P L A + +++LT P S +S LAP +VQ
Sbjct: 1560 GPPLGPTQTLSLAPAPPLAPASPVGPAPAHTLTLAPASSSASLLAPASVQ 1609
>BX537412-1|CAD97654.1| 612|Homo sapiens hypothetical protein
protein.
Length = 612
Score = 29.9 bits (64), Expect = 6.7
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = -1
Query: 534 PLHGVFFCQTMGESNFASL--TSSMSY-IETWSTKNNVEIQTIDTNRWIIFD 388
P+ G+ +G +F+ L TSS + ++ W+TKNN + + + N ++D
Sbjct: 452 PITGIHCHAAVGAVDFSHLFVTSSFDWTVKLWTTKNNKPLYSFEDNADYVYD 503
>BT007130-1|AAP35794.1| 612|Homo sapiens dynein, cytoplasmic,
intermediate polypeptide 2 protein.
Length = 612
Score = 29.9 bits (64), Expect = 6.7
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = -1
Query: 534 PLHGVFFCQTMGESNFASL--TSSMSY-IETWSTKNNVEIQTIDTNRWIIFD 388
P+ G+ +G +F+ L TSS + ++ W+TKNN + + + N ++D
Sbjct: 452 PITGIHCHAAVGAVDFSHLFVTSSFDWTVKLWTTKNNKPLYSFEDNADYVYD 503
>BC109375-1|AAI09376.1| 612|Homo sapiens DYNC1I2 protein protein.
Length = 612
Score = 29.9 bits (64), Expect = 6.7
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = -1
Query: 534 PLHGVFFCQTMGESNFASL--TSSMSY-IETWSTKNNVEIQTIDTNRWIIFD 388
P+ G+ +G +F+ L TSS + ++ W+TKNN + + + N ++D
Sbjct: 452 PITGIHCHAAVGAVDFSHLFVTSSFDWTVKLWTTKNNKPLYSFEDNADYVYD 503
>BC091498-1|AAH91498.1| 612|Homo sapiens DYNC1I2 protein protein.
Length = 612
Score = 29.9 bits (64), Expect = 6.7
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = -1
Query: 534 PLHGVFFCQTMGESNFASL--TSSMSY-IETWSTKNNVEIQTIDTNRWIIFD 388
P+ G+ +G +F+ L TSS + ++ W+TKNN + + + N ++D
Sbjct: 452 PITGIHCHAAVGAVDFSHLFVTSSFDWTVKLWTTKNNKPLYSFEDNADYVYD 503
>BC015038-1|AAH15038.1| 612|Homo sapiens DYNC1I2 protein protein.
Length = 612
Score = 29.9 bits (64), Expect = 6.7
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = -1
Query: 534 PLHGVFFCQTMGESNFASL--TSSMSY-IETWSTKNNVEIQTIDTNRWIIFD 388
P+ G+ +G +F+ L TSS + ++ W+TKNN + + + N ++D
Sbjct: 452 PITGIHCHAAVGAVDFSHLFVTSSFDWTVKLWTTKNNKPLYSFEDNADYVYD 503
>AL137519-1|CAB70785.1| 429|Homo sapiens hypothetical protein
protein.
Length = 429
Score = 29.9 bits (64), Expect = 6.7
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = -1
Query: 534 PLHGVFFCQTMGESNFASL--TSSMSY-IETWSTKNNVEIQTIDTNRWIIFD 388
P+ G+ +G +F+ L TSS + ++ W+TKNN + + + N ++D
Sbjct: 269 PITGIHCHAAVGAVDFSHLFVTSSFDWTVKLWTTKNNKPLYSFEDNADYVYD 320
>AK055491-1|BAB70932.1| 638|Homo sapiens protein ( Homo sapiens
cDNA FLJ30929 fis, clone FEBRA2006808, highly similar to
DYNEIN INTERMEDIATE CHAIN 2, CYTOSOLIC. ).
Length = 638
Score = 29.9 bits (64), Expect = 6.7
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = -1
Query: 534 PLHGVFFCQTMGESNFASL--TSSMSY-IETWSTKNNVEIQTIDTNRWIIFD 388
P+ G+ +G +F+ L TSS + ++ W+TKNN + + + N ++D
Sbjct: 478 PITGIHCHAAVGAVDFSHLFVTSSFDWTVKLWTTKNNKPLYSFEDNADYVYD 529
>AK026574-1|BAB15502.1| 321|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22921 fis, clone KAT06711. ).
Length = 321
Score = 29.9 bits (64), Expect = 6.7
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = -1
Query: 534 PLHGVFFCQTMGESNFASL--TSSMSY-IETWSTKNNVEIQTIDTNRWIIFD 388
P+ G+ +G +F+ L TSS + ++ W+TKNN + + + N ++D
Sbjct: 161 PITGIHCHAAVGAVDFSHLFVTSSFDWTVKLWTTKNNKPLYSFEDNADYVYD 212
>AF250307-1|AAK37426.1| 612|Homo sapiens cytoplasmic dynein
intermediate chain 2C protein.
Length = 612
Score = 29.9 bits (64), Expect = 6.7
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = -1
Query: 534 PLHGVFFCQTMGESNFASL--TSSMSY-IETWSTKNNVEIQTIDTNRWIIFD 388
P+ G+ +G +F+ L TSS + ++ W+TKNN + + + N ++D
Sbjct: 452 PITGIHCHAAVGAVDFSHLFVTSSFDWTVKLWTTKNNKPLYSFEDNADYVYD 503
>AC068039-1|AAY24133.1| 562|Homo sapiens unknown protein.
Length = 562
Score = 29.9 bits (64), Expect = 6.7
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = -1
Query: 534 PLHGVFFCQTMGESNFASL--TSSMSY-IETWSTKNNVEIQTIDTNRWIIFD 388
P+ G+ +G +F+ L TSS + ++ W+TKNN + + + N ++D
Sbjct: 402 PITGIHCHAAVGAVDFSHLFVTSSFDWTVKLWTTKNNKPLYSFEDNADYVYD 453
>AB209014-1|BAD92251.1| 575|Homo sapiens dynein, cytoplasmic,
intermediate polypeptide 2 variant protein.
Length = 575
Score = 29.9 bits (64), Expect = 6.7
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = -1
Query: 534 PLHGVFFCQTMGESNFASL--TSSMSY-IETWSTKNNVEIQTIDTNRWIIFD 388
P+ G+ +G +F+ L TSS + ++ W+TKNN + + + N ++D
Sbjct: 415 PITGIHCHAAVGAVDFSHLFVTSSFDWTVKLWTTKNNKPLYSFEDNADYVYD 466
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,706,686
Number of Sequences: 237096
Number of extensions: 2031626
Number of successful extensions: 19919
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 15662
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19919
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5872755824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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