Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_K16
         (467 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ300461-1|CAC32454.1|  981|Homo sapiens hypothetical protein pr...    30   3.5  
BC032944-1|AAH32944.1|  789|Homo sapiens KIAA0317 protein protein.     29   6.1  
AC007956-1|AAF61276.1|  823|Homo sapiens KIAA0317 protein.             29   6.1  
AB002315-1|BAA20775.2|  826|Homo sapiens KIAA0317 protein.             29   6.1  

>AJ300461-1|CAC32454.1|  981|Homo sapiens hypothetical protein
           protein.
          Length = 981

 Score = 30.3 bits (65), Expect = 3.5
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = -1

Query: 245 EKTNDEENCSKSIPKISFSDLEKSISSFSGDNNYTVET 132
           E+ N EEN + S+ + SF+DL     +   D +YT E+
Sbjct: 79  EQVNTEENKNDSVLRCSFADLSDFCLALGKDKDYTDES 116


>BC032944-1|AAH32944.1|  789|Homo sapiens KIAA0317 protein protein.
          Length = 789

 Score = 29.5 bits (63), Expect = 6.1
 Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
 Frame = -1

Query: 170 SSFSGDNNYTVETWIKDFEDI---TELMQWSGIEK---IIYAKRLLTGTAQLFLRSS 18
           SS     N+++  W K+FE +    E + W G  +    +  K L   T QLF R S
Sbjct: 474 SSLKATRNFSISDWSKNFEVVFQDEEALDWGGPRREWFELICKALFDTTNQLFTRFS 530


>AC007956-1|AAF61276.1|  823|Homo sapiens KIAA0317 protein.
          Length = 823

 Score = 29.5 bits (63), Expect = 6.1
 Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
 Frame = -1

Query: 170 SSFSGDNNYTVETWIKDFEDI---TELMQWSGIEK---IIYAKRLLTGTAQLFLRSS 18
           SS     N+++  W K+FE +    E + W G  +    +  K L   T QLF R S
Sbjct: 474 SSLKATRNFSISDWSKNFEVVFQDEEALDWGGPRREWFELICKALFDTTNQLFTRFS 530


>AB002315-1|BAA20775.2|  826|Homo sapiens KIAA0317 protein.
          Length = 826

 Score = 29.5 bits (63), Expect = 6.1
 Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
 Frame = -1

Query: 170 SSFSGDNNYTVETWIKDFEDI---TELMQWSGIEK---IIYAKRLLTGTAQLFLRSS 18
           SS     N+++  W K+FE +    E + W G  +    +  K L   T QLF R S
Sbjct: 477 SSLKATRNFSISDWSKNFEVVFQDEEALDWGGPRREWFELICKALFDTTNQLFTRFS 533


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,495,311
Number of Sequences: 237096
Number of extensions: 872629
Number of successful extensions: 1786
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1786
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4042952858
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)