Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_K13
(397 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR456924-1|CAG33205.1| 98|Homo sapiens NDUFB3 protein. 55 7e-08
BC018183-1|AAH18183.1| 98|Homo sapiens NADH dehydrogenase (ubi... 55 7e-08
AF047183-1|AAC04268.1| 98|Homo sapiens NADH-ubiquinone oxidore... 55 7e-08
AF035839-1|AAC15590.1| 98|Homo sapiens NADH:ubiquinone oxidore... 55 7e-08
AC007272-1|AAX88972.1| 98|Homo sapiens unknown protein. 55 7e-08
BC047054-1|AAH47054.1| 349|Homo sapiens family with sequence si... 32 0.79
AL512286-3|CAI40801.1| 349|Homo sapiens novel protein protein. 32 0.79
AF450484-1|AAP97678.1| 349|Homo sapiens unknown protein. 32 0.79
U58917-1|AAB99730.1| 866|Homo sapiens IL-17 receptor protein. 29 4.2
CT841520-1|CAJ86450.1| 866|Homo sapiens IL17R protein. 29 4.2
BC011624-1|AAH11624.1| 866|Homo sapiens interleukin 17 receptor... 29 4.2
AF389880-1|AAL93215.1| 3036|Homo sapiens rabconnectin protein. 28 9.7
AB020663-1|BAA74879.2| 2237|Homo sapiens KIAA0856 protein protein. 28 9.7
>CR456924-1|CAG33205.1| 98|Homo sapiens NDUFB3 protein.
Length = 98
Score = 55.2 bits (127), Expect = 7e-08
Identities = 28/49 (57%), Positives = 32/49 (65%)
Frame = +3
Query: 78 GHRTMYLTLRSFADIKGIPQLEELEKALAAKGLKDPWIRNEAWRYHPGF 224
GH M L I+G P LE ++K LAAKGL+DPW RNEAWRY GF
Sbjct: 10 GHHKMELPDYRQWKIEGTP-LETIQKKLAAKGLRDPWGRNEAWRYMGGF 57
>BC018183-1|AAH18183.1| 98|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 beta subcomplex, 3, 12kDa protein.
Length = 98
Score = 55.2 bits (127), Expect = 7e-08
Identities = 28/49 (57%), Positives = 32/49 (65%)
Frame = +3
Query: 78 GHRTMYLTLRSFADIKGIPQLEELEKALAAKGLKDPWIRNEAWRYHPGF 224
GH M L I+G P LE ++K LAAKGL+DPW RNEAWRY GF
Sbjct: 10 GHHKMELPDYRQWKIEGTP-LETIQKKLAAKGLRDPWGRNEAWRYMGGF 57
>AF047183-1|AAC04268.1| 98|Homo sapiens NADH-ubiquinone
oxidoreductase subunit CI-B12 protein.
Length = 98
Score = 55.2 bits (127), Expect = 7e-08
Identities = 28/49 (57%), Positives = 32/49 (65%)
Frame = +3
Query: 78 GHRTMYLTLRSFADIKGIPQLEELEKALAAKGLKDPWIRNEAWRYHPGF 224
GH M L I+G P LE ++K LAAKGL+DPW RNEAWRY GF
Sbjct: 10 GHHKMELPDYRQWKIEGTP-LETIQKKLAAKGLRDPWGRNEAWRYMGGF 57
>AF035839-1|AAC15590.1| 98|Homo sapiens NADH:ubiquinone
oxidoreductase B12 subunit protein.
Length = 98
Score = 55.2 bits (127), Expect = 7e-08
Identities = 28/49 (57%), Positives = 32/49 (65%)
Frame = +3
Query: 78 GHRTMYLTLRSFADIKGIPQLEELEKALAAKGLKDPWIRNEAWRYHPGF 224
GH M L I+G P LE ++K LAAKGL+DPW RNEAWRY GF
Sbjct: 10 GHHKMELPDYRQWKIEGTP-LETIQKKLAAKGLRDPWGRNEAWRYMGGF 57
>AC007272-1|AAX88972.1| 98|Homo sapiens unknown protein.
Length = 98
Score = 55.2 bits (127), Expect = 7e-08
Identities = 28/49 (57%), Positives = 32/49 (65%)
Frame = +3
Query: 78 GHRTMYLTLRSFADIKGIPQLEELEKALAAKGLKDPWIRNEAWRYHPGF 224
GH M L I+G P LE ++K LAAKGL+DPW RNEAWRY GF
Sbjct: 10 GHHKMELPDYRQWKIEGTP-LETIQKKLAAKGLRDPWGRNEAWRYMGGF 57
>BC047054-1|AAH47054.1| 349|Homo sapiens family with sequence
similarity 70, member A protein.
Length = 349
Score = 31.9 bits (69), Expect = 0.79
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = -3
Query: 311 VYSNSYHSKPKTKRKASEEKFSSSLPASAKSRVV 210
+Y+N H PKT +K +EE SSS S +RV+
Sbjct: 123 LYANRCHYVPKTSQKEAEEVISSSTKNSPSTRVM 156
>AL512286-3|CAI40801.1| 349|Homo sapiens novel protein protein.
Length = 349
Score = 31.9 bits (69), Expect = 0.79
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = -3
Query: 311 VYSNSYHSKPKTKRKASEEKFSSSLPASAKSRVV 210
+Y+N H PKT +K +EE SSS S +RV+
Sbjct: 123 LYANRCHYVPKTSQKEAEEVISSSTKNSPSTRVM 156
>AF450484-1|AAP97678.1| 349|Homo sapiens unknown protein.
Length = 349
Score = 31.9 bits (69), Expect = 0.79
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = -3
Query: 311 VYSNSYHSKPKTKRKASEEKFSSSLPASAKSRVV 210
+Y+N H PKT +K +EE SSS S +RV+
Sbjct: 123 LYANRCHYVPKTSQKEAEEVISSSTKNSPSTRVM 156
>U58917-1|AAB99730.1| 866|Homo sapiens IL-17 receptor protein.
Length = 866
Score = 29.5 bits (63), Expect = 4.2
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = -2
Query: 297 LSQ*AQDQEESL*RKIFELSASECQIQGGTSKPHF*SRGP*DP*QQELSQVLQ 139
L + ++ E L +FE S S CQ QGG S+P P P ++E Q +Q
Sbjct: 740 LPEDVREHLEGLMLSLFEQSLS-CQAQGGCSRPAMVLTDPHTPYEEEQRQSVQ 791
>CT841520-1|CAJ86450.1| 866|Homo sapiens IL17R protein.
Length = 866
Score = 29.5 bits (63), Expect = 4.2
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = -2
Query: 297 LSQ*AQDQEESL*RKIFELSASECQIQGGTSKPHF*SRGP*DP*QQELSQVLQ 139
L + ++ E L +FE S S CQ QGG S+P P P ++E Q +Q
Sbjct: 740 LPEDVREHLEGLMLSLFEQSLS-CQAQGGCSRPAMVLTDPHTPYEEEQRQSVQ 791
>BC011624-1|AAH11624.1| 866|Homo sapiens interleukin 17 receptor A
protein.
Length = 866
Score = 29.5 bits (63), Expect = 4.2
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = -2
Query: 297 LSQ*AQDQEESL*RKIFELSASECQIQGGTSKPHF*SRGP*DP*QQELSQVLQ 139
L + ++ E L +FE S S CQ QGG S+P P P ++E Q +Q
Sbjct: 740 LPEDVREHLEGLMLSLFEQSLS-CQAQGGCSRPAMVLTDPHTPYEEEQRQSVQ 791
>AF389880-1|AAL93215.1| 3036|Homo sapiens rabconnectin protein.
Length = 3036
Score = 28.3 bits (60), Expect = 9.7
Identities = 12/59 (20%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = -1
Query: 208 LQASFLIQGSLRPLAARAFSSSSSCG--IPFMSAKLRKVRYIVRWPVMNIATHLYDMIF 38
++ FL+Q S + + S +P +SA + + ++ PV+ + H++D+++
Sbjct: 2177 MELKFLLQESQQETTVKQLQSPLPLPTTLPLLSASIASTKTVIANPVLYLNNHIHDILY 2235
>AB020663-1|BAA74879.2| 2237|Homo sapiens KIAA0856 protein protein.
Length = 2237
Score = 28.3 bits (60), Expect = 9.7
Identities = 12/59 (20%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = -1
Query: 208 LQASFLIQGSLRPLAARAFSSSSSCG--IPFMSAKLRKVRYIVRWPVMNIATHLYDMIF 38
++ FL+Q S + + S +P +SA + + ++ PV+ + H++D+++
Sbjct: 1377 MELKFLLQESQQETTVKQLQSPLPLPTTLPLLSASIASTKTVIANPVLYLNNHIHDILY 1435
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,462,517
Number of Sequences: 237096
Number of extensions: 1100108
Number of successful extensions: 2699
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2632
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2698
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2813442310
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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