Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_K13
         (397 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-3244|AAF46744.1|  110|Drosophila melanogaster CG10320-P...    57   7e-09
AF220096-1|AAF26436.1|  380|Drosophila melanogaster homeobox pro...    31   0.42 
AE014297-3396|AAF56194.2| 2072|Drosophila melanogaster CG10192-P...    29   3.0  
BT022193-1|AAY51587.1|  196|Drosophila melanogaster IP01147p pro...    27   6.8  
AE014134-2598|AAF53459.1|  196|Drosophila melanogaster CG15258-P...    27   6.8  
AY113252-1|AAM29257.1|   89|Drosophila melanogaster AT13736p pro...    27   9.0  
AE014296-2915|AAF49336.1|   89|Drosophila melanogaster CG7580-PA...    27   9.0  
AE014296-2069|AAS65018.1| 1799|Drosophila melanogaster CG33265-P...    27   9.0  

>AE013599-3244|AAF46744.1|  110|Drosophila melanogaster CG10320-PA
           protein.
          Length = 110

 Score = 57.2 bits (132), Expect = 7e-09
 Identities = 23/42 (54%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
 Frame = +3

Query: 120 IKGIPQLEELEKALAAKGLKDPWIRNEAWRYHP-GFGTRWQR 242
           ++ +PQL E+++AL  +GLKDPW+RNE WRY P  FGT   R
Sbjct: 19  VESVPQLVEVKEALGRQGLKDPWLRNEVWRYEPKAFGTHRSR 60


>AF220096-1|AAF26436.1|  380|Drosophila melanogaster homeobox
           protein Scarecrow protein.
          Length = 380

 Score = 31.5 bits (68), Expect = 0.42
 Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
 Frame = -3

Query: 347 TIMTMTTTSNQLVYSNS-YHSKPKTKRKASEEKFSSSLPASAKSRVVPPSLISN 189
           +++ +T T  ++ + N  Y  K + KRKA  E+   + PAS+  RV  P L+ +
Sbjct: 200 SLIHLTPTQVKIWFQNHRYKCKRQAKRKAMAEQNQHNQPASSPRRVAVPVLVKD 253


>AE014297-3396|AAF56194.2| 2072|Drosophila melanogaster CG10192-PA
           protein.
          Length = 2072

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 20/71 (28%), Positives = 31/71 (43%)
 Frame = -3

Query: 392 NNIKSTHYSFKLMAFTIMTMTTTSNQLVYSNSYHSKPKTKRKASEEKFSSSLPASAKSRV 213
           +N+  TH S  L+   +   T T  Q V    +  + K +R     K S++ PAS  + V
Sbjct: 592 DNVTETHNSLPLVQSDLPDTTDTCQQPVL---FQEQAKKQRPKLANKQSTATPASIANDV 648

Query: 212 VPPSLISNPGV 180
              +    PGV
Sbjct: 649 AEAAASGCPGV 659


>BT022193-1|AAY51587.1|  196|Drosophila melanogaster IP01147p
           protein.
          Length = 196

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = -3

Query: 392 NNIKSTHYSFKLMAFTIMTMTTTSN-QLVYSNSYHSKPKTKRKASEEKFSSSLPASAKSR 216
           + I ST     L A    +M   S  Q V + S  + P  KRK+ ++KF S  P  +K R
Sbjct: 85  HGITSTTLPSPLSAVPTASMVKKSLVQGVKNMSNRTSPGVKRKSPKQKFQSPKPNRSKQR 144


>AE014134-2598|AAF53459.1|  196|Drosophila melanogaster CG15258-PA
           protein.
          Length = 196

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = -3

Query: 392 NNIKSTHYSFKLMAFTIMTMTTTSN-QLVYSNSYHSKPKTKRKASEEKFSSSLPASAKSR 216
           + I ST     L A    +M   S  Q V + S  + P  KRK+ ++KF S  P  +K R
Sbjct: 85  HGITSTTLPSPLSAVPTASMVKKSLVQGVKNMSNRTSPGVKRKSPKQKFQSPKPNRSKQR 144


>AY113252-1|AAM29257.1|   89|Drosophila melanogaster AT13736p
           protein.
          Length = 89

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = -1

Query: 193 LIQGSLRPLAARAFSSSSSCGIPFMSAKLRKVRYIVRWPVMNIATHLYDM 44
           ++   L P   RAF+ + S G+P M  + R   +IV  P + +   +YD+
Sbjct: 21  IVTYKLSPFEQRAFAGAISKGLPNMVRRFRSNVFIVTPPFI-VGYLIYDL 69


>AE014296-2915|AAF49336.1|   89|Drosophila melanogaster CG7580-PA
           protein.
          Length = 89

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = -1

Query: 193 LIQGSLRPLAARAFSSSSSCGIPFMSAKLRKVRYIVRWPVMNIATHLYDM 44
           ++   L P   RAF+ + S G+P M  + R   +IV  P + +   +YD+
Sbjct: 21  IVTYKLSPFEQRAFAGAISKGLPNMVRRFRSNVFIVTPPFI-VGYLIYDL 69


>AE014296-2069|AAS65018.1| 1799|Drosophila melanogaster CG33265-PA
            protein.
          Length = 1799

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = -3

Query: 329  TTSNQLVYSNSYHSKPKTKRKASEEKFSSSLPASAKSRVVPPS 201
            +TS  LVY  +    P + R  + E  SSS P +  S + P S
Sbjct: 1583 STSTTLVYDTTSSPIPSSSRSTTLEPSSSSSPETTTSSLPPLS 1625


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,617,785
Number of Sequences: 53049
Number of extensions: 314513
Number of successful extensions: 1245
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1227
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1245
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1128794130
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)