Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_K13
(397 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70034-4|CAA93855.1| 103|Caenorhabditis elegans Hypothetical pr... 42 2e-04
Z75551-1|CAA99933.1| 299|Caenorhabditis elegans Hypothetical pr... 34 0.032
U22831-10|AAM98012.1| 667|Caenorhabditis elegans G-protein-link... 29 1.2
AY053364-1|AAL15152.1| 664|Caenorhabditis elegans G-protein-lin... 29 1.2
Z95310-2|CAB08563.1| 394|Caenorhabditis elegans Hypothetical pr... 29 1.6
Z83104-6|CAB05479.1| 394|Caenorhabditis elegans Hypothetical pr... 29 1.6
Z48582-4|CAI46606.1| 349|Caenorhabditis elegans Hypothetical pr... 28 2.1
AF016446-10|AAC24161.1| 1050|Caenorhabditis elegans Hypothetical... 28 2.1
Z78540-6|CAD30431.1| 887|Caenorhabditis elegans Hypothetical pr... 27 3.7
Z78540-5|CAB01738.2| 793|Caenorhabditis elegans Hypothetical pr... 27 3.7
Z72501-3|CAD30430.1| 887|Caenorhabditis elegans Hypothetical pr... 27 3.7
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 27 3.7
U23147-7|AAC46691.1| 596|Caenorhabditis elegans Rapsyn protein ... 27 3.7
AL032627-1|CAB63352.2| 444|Caenorhabditis elegans Hypothetical ... 27 3.7
AJ133838-1|CAB44432.1| 793|Caenorhabditis elegans DYC-1 protein... 27 3.7
AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ... 27 4.9
Z68132-1|CAA92221.2| 374|Caenorhabditis elegans Hypothetical pr... 27 6.4
U80031-1|AAB37611.1| 392|Caenorhabditis elegans Downstream of d... 27 6.4
AF003138-5|AAL77178.1| 488|Caenorhabditis elegans Hypothetical ... 27 6.4
AF003138-4|ABD94108.1| 400|Caenorhabditis elegans Hypothetical ... 27 6.4
AF003138-3|AAM15568.1| 504|Caenorhabditis elegans Hypothetical ... 27 6.4
AF003138-2|AAM15567.1| 546|Caenorhabditis elegans Hypothetical ... 27 6.4
Z92827-2|CAB07327.2| 394|Caenorhabditis elegans Hypothetical pr... 26 8.5
Z37983-7|CAA86058.1| 1106|Caenorhabditis elegans Hypothetical pr... 26 8.5
L16685-3|AAA28169.3| 321|Caenorhabditis elegans Hypothetical pr... 26 8.5
AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical... 26 8.5
>Z70034-4|CAA93855.1| 103|Caenorhabditis elegans Hypothetical
protein C18E9.4 protein.
Length = 103
Score = 41.9 bits (94), Expect = 2e-04
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Frame = +3
Query: 111 FADIKGIPQLEELEKALAAKGLKDPWIRNEAWRY---HPGFGTRWQRARK 251
+++ + PQL + EK LA GLKDPWIRN + Y +P +W +K
Sbjct: 17 YSNFRDFPQLAQHEKRLAQIGLKDPWIRNYVYLYDRKYPHVVGQWAHFKK 66
>Z75551-1|CAA99933.1| 299|Caenorhabditis elegans Hypothetical
protein T28H10.1 protein.
Length = 299
Score = 34.3 bits (75), Expect = 0.032
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -1
Query: 229 VPNPGWYLQASFLIQGSLRPLAARAFSSSSSCGIPFMSAKLRKV 98
+P P W + SF+ + +A+ S++SC IPF L ++
Sbjct: 214 IPQPQWIFEESFIGENHCVAVASEVSPSTTSCAIPFQMMSLEEI 257
>U22831-10|AAM98012.1| 667|Caenorhabditis elegans G-protein-linked
acetylcholinereceptor protein 2, isoform c protein.
Length = 667
Score = 29.1 bits (62), Expect = 1.2
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = -3
Query: 281 KTKRKASEEKFSSSLPASAKSRVVPPSLIS 192
++KRKA++ K S+ P S S ++PPS S
Sbjct: 511 RSKRKANKNKVSTCSPKSTTSLLLPPSTSS 540
>AY053364-1|AAL15152.1| 664|Caenorhabditis elegans G-protein-linked
acetylcholinereceptor GAR-2a protein.
Length = 664
Score = 29.1 bits (62), Expect = 1.2
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = -3
Query: 281 KTKRKASEEKFSSSLPASAKSRVVPPSLIS 192
++KRKA++ K S+ P S S ++PPS S
Sbjct: 511 RSKRKANKNKVSTCSPKSTTSLLLPPSTSS 540
>Z95310-2|CAB08563.1| 394|Caenorhabditis elegans Hypothetical
protein F09B12.5 protein.
Length = 394
Score = 28.7 bits (61), Expect = 1.6
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = -3
Query: 332 TTTSNQLVYSNSYHSKPKTKRKASEEKFSSSLPASAKSRVVPPSLISNPGVLET 171
TT S L S++ +KP T + S+ F S+LPA V+P + S+P T
Sbjct: 258 TTQSPALTSSSAKPTKPPTTSETSKPTFPSTLPA----YVLPMTTTSHPSTHTT 307
>Z83104-6|CAB05479.1| 394|Caenorhabditis elegans Hypothetical
protein F09B12.5 protein.
Length = 394
Score = 28.7 bits (61), Expect = 1.6
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = -3
Query: 332 TTTSNQLVYSNSYHSKPKTKRKASEEKFSSSLPASAKSRVVPPSLISNPGVLET 171
TT S L S++ +KP T + S+ F S+LPA V+P + S+P T
Sbjct: 258 TTQSPALTSSSAKPTKPPTTSETSKPTFPSTLPA----YVLPMTTTSHPSTHTT 307
>Z48582-4|CAI46606.1| 349|Caenorhabditis elegans Hypothetical
protein F27E5.8 protein.
Length = 349
Score = 28.3 bits (60), Expect = 2.1
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -3
Query: 389 NIKSTHYSFKLMAFTIMTMTTTSNQLVYSNSYHSKPKTKRKASEEK 252
NI+STH F L+A ++ T + + L+Y Y TK A E+
Sbjct: 218 NIRSTHLLFPLLALMLIFSTLSVSVLIY-GGYWVSVMTKEPARFEE 262
>AF016446-10|AAC24161.1| 1050|Caenorhabditis elegans Hypothetical
protein C02E7.1 protein.
Length = 1050
Score = 28.3 bits (60), Expect = 2.1
Identities = 15/43 (34%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Frame = -3
Query: 347 TIMTMTTTSNQLVYSNSYHS-KPKTKRKASEEKFS-SSLPASA 225
T+ T L Y+NSY+S +P+ +R++++ +FS +S PA +
Sbjct: 384 TLTKNCMTVTDLWYNNSYNSGRPENRRRSTKTRFSITSNPAQS 426
>Z78540-6|CAD30431.1| 887|Caenorhabditis elegans Hypothetical
protein C33G3.1b protein.
Length = 887
Score = 27.5 bits (58), Expect = 3.7
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -3
Query: 296 YHSKPKTKRKASEEKFSSSLPASAKSRVVPPSLISNPG 183
Y KP++ +++F++ LP+ S PSL NPG
Sbjct: 293 YQQKPQSLLNIQQQQFNT-LPSQMPSTQTLPSLSENPG 329
>Z78540-5|CAB01738.2| 793|Caenorhabditis elegans Hypothetical
protein C33G3.1a protein.
Length = 793
Score = 27.5 bits (58), Expect = 3.7
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -3
Query: 296 YHSKPKTKRKASEEKFSSSLPASAKSRVVPPSLISNPG 183
Y KP++ +++F++ LP+ S PSL NPG
Sbjct: 199 YQQKPQSLLNIQQQQFNT-LPSQMPSTQTLPSLSENPG 235
>Z72501-3|CAD30430.1| 887|Caenorhabditis elegans Hypothetical
protein C33G3.1b protein.
Length = 887
Score = 27.5 bits (58), Expect = 3.7
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -3
Query: 296 YHSKPKTKRKASEEKFSSSLPASAKSRVVPPSLISNPG 183
Y KP++ +++F++ LP+ S PSL NPG
Sbjct: 293 YQQKPQSLLNIQQQQFNT-LPSQMPSTQTLPSLSENPG 329
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical
protein F35A5.1 protein.
Length = 1274
Score = 27.5 bits (58), Expect = 3.7
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -3
Query: 284 PKTKRKASEEKFSSSLPASAKSRVVPPSLISNP 186
P K + S K ++ L A K++ VPP+ + NP
Sbjct: 399 PAVKPRDSSPKKATPLQADPKAQEVPPTPVKNP 431
>U23147-7|AAC46691.1| 596|Caenorhabditis elegans Rapsyn protein 1
protein.
Length = 596
Score = 27.5 bits (58), Expect = 3.7
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = -3
Query: 344 IMTMTTTSNQLVYSNSYHSKPKTKRKASEEKFSSSLPASAKSRVVPPSLISNPGVL 177
I+T +TTS +SN+ H P RK + ++LP S+ + P ++ G L
Sbjct: 532 ILTASTTSQSHTHSNANHKPPPPPRKPCCSQ--AALPPSSIVALPPAMPLAEDGPL 585
>AL032627-1|CAB63352.2| 444|Caenorhabditis elegans Hypothetical
protein Y41C4A.1 protein.
Length = 444
Score = 27.5 bits (58), Expect = 3.7
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 138 LEELEKALAAKGLKDPWIRNEAWRYHP 218
+ ELEK L AKG++ + + W+Y P
Sbjct: 357 IAELEKTLWAKGMQYKAVMSGYWKYEP 383
>AJ133838-1|CAB44432.1| 793|Caenorhabditis elegans DYC-1 protein
protein.
Length = 793
Score = 27.5 bits (58), Expect = 3.7
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -3
Query: 296 YHSKPKTKRKASEEKFSSSLPASAKSRVVPPSLISNPG 183
Y KP++ +++F++ LP+ S PSL NPG
Sbjct: 199 YQQKPQSLLNIQQQQFNT-LPSQMPSTQTLPSLSENPG 235
>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
protein F39C12.1 protein.
Length = 5105
Score = 27.1 bits (57), Expect = 4.9
Identities = 18/62 (29%), Positives = 28/62 (45%)
Frame = -2
Query: 234 SECQIQGGTSKPHF*SRGP*DP*QQELSQVLQVAGYPLCRQNFVKLGTLYGGP**TSPPI 55
S Q+ G +S P P P Q E+ Q +Q P R+ + +LG + P P+
Sbjct: 3385 SPLQLSGDSSLPRPAQPSPEKPPQLEVPQGVQTYNPPSQRKYYTRLGREWKPPPKAKTPL 3444
Query: 54 SM 49
S+
Sbjct: 3445 SI 3446
>Z68132-1|CAA92221.2| 374|Caenorhabditis elegans Hypothetical
protein F09C8.1 protein.
Length = 374
Score = 26.6 bits (56), Expect = 6.4
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = -1
Query: 289 VSPRPRGKPLKKNFRALCQRVPNPGWYLQASFLIQGSLRPLAARAFSSSSS 137
+ P GKP +K F C G L +++L L+P+ +++ S+ S
Sbjct: 291 IPPMENGKPTQKFFAPDCFHFSQWGHALVSTYLWNNILQPVGSKSTVSNMS 341
>U80031-1|AAB37611.1| 392|Caenorhabditis elegans Downstream of
daf-16 (regulatedby daf-16) protein 20 protein.
Length = 392
Score = 26.6 bits (56), Expect = 6.4
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = -3
Query: 380 STHYSFKLMAFTIMTMTTTSNQLVYSNSYHSKPKTKRKASEEKFSSSLPA 231
ST +++ F + T T+ Q ++SN H+ A+ EKFS SL A
Sbjct: 169 STAHAYLYTDFPLDTAEETNTQ-IFSNPMHTDKADLYFANVEKFSLSLVA 217
>AF003138-5|AAL77178.1| 488|Caenorhabditis elegans Hypothetical
protein F12B6.2b protein.
Length = 488
Score = 26.6 bits (56), Expect = 6.4
Identities = 18/69 (26%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Frame = -1
Query: 217 GWYLQASFLIQGSLRPLAARA-----FSSSSSCGIP---FMSAKLRKVRYIVRWPVMNIA 62
G+ + A ++ S PL+ ++ F++ + GI F++AKL ++ + WP++ I
Sbjct: 103 GFVIPAGSVLISSWFPLSEKSTAMAIFTTGNQIGIAVSMFLTAKLCQLHFFEGWPLVFIV 162
Query: 61 THLYDMIFL 35
L +FL
Sbjct: 163 YGLIGAVFL 171
>AF003138-4|ABD94108.1| 400|Caenorhabditis elegans Hypothetical
protein F12B6.2d protein.
Length = 400
Score = 26.6 bits (56), Expect = 6.4
Identities = 18/69 (26%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Frame = -1
Query: 217 GWYLQASFLIQGSLRPLAARA-----FSSSSSCGIP---FMSAKLRKVRYIVRWPVMNIA 62
G+ + A ++ S PL+ ++ F++ + GI F++AKL ++ + WP++ I
Sbjct: 145 GFVIPAGSVLISSWFPLSEKSTAMAIFTTGNQIGIAVSMFLTAKLCQLHFFEGWPLVFIV 204
Query: 61 THLYDMIFL 35
L +FL
Sbjct: 205 YGLIGAVFL 213
>AF003138-3|AAM15568.1| 504|Caenorhabditis elegans Hypothetical
protein F12B6.2c protein.
Length = 504
Score = 26.6 bits (56), Expect = 6.4
Identities = 18/69 (26%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Frame = -1
Query: 217 GWYLQASFLIQGSLRPLAARA-----FSSSSSCGIP---FMSAKLRKVRYIVRWPVMNIA 62
G+ + A ++ S PL+ ++ F++ + GI F++AKL ++ + WP++ I
Sbjct: 103 GFVIPAGSVLISSWFPLSEKSTAMAIFTTGNQIGIAVSMFLTAKLCQLHFFEGWPLVFIV 162
Query: 61 THLYDMIFL 35
L +FL
Sbjct: 163 YGLIGAVFL 171
>AF003138-2|AAM15567.1| 546|Caenorhabditis elegans Hypothetical
protein F12B6.2a protein.
Length = 546
Score = 26.6 bits (56), Expect = 6.4
Identities = 18/69 (26%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Frame = -1
Query: 217 GWYLQASFLIQGSLRPLAARA-----FSSSSSCGIP---FMSAKLRKVRYIVRWPVMNIA 62
G+ + A ++ S PL+ ++ F++ + GI F++AKL ++ + WP++ I
Sbjct: 145 GFVIPAGSVLISSWFPLSEKSTAMAIFTTGNQIGIAVSMFLTAKLCQLHFFEGWPLVFIV 204
Query: 61 THLYDMIFL 35
L +FL
Sbjct: 205 YGLIGAVFL 213
>Z92827-2|CAB07327.2| 394|Caenorhabditis elegans Hypothetical
protein C29F7.2 protein.
Length = 394
Score = 26.2 bits (55), Expect = 8.5
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 141 EELEKALAAKGLKDPWIRNE 200
++L L AKG+K PW R E
Sbjct: 314 DKLSSGLEAKGVKMPWTREE 333
>Z37983-7|CAA86058.1| 1106|Caenorhabditis elegans Hypothetical
protein B0393.5 protein.
Length = 1106
Score = 26.2 bits (55), Expect = 8.5
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +1
Query: 10 ETQP**ICSEISYHRDGWRCSSRATVQ 90
E+ P +C + YH DG+RC++R ++
Sbjct: 899 ESNPKCVCRK-GYHGDGFRCTTRDNIK 924
>L16685-3|AAA28169.3| 321|Caenorhabditis elegans Hypothetical
protein ZC21.3 protein.
Length = 321
Score = 26.2 bits (55), Expect = 8.5
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = -3
Query: 323 SNQLVYSNSYHSKPKTKRKASEEKFSSSLPA 231
+NQ + SN Y+++P + S +++ SS P+
Sbjct: 246 NNQQMNSNGYNNQPMYDQSYSTQQYGSSTPS 276
>AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical
protein F59E12.1 protein.
Length = 811
Score = 26.2 bits (55), Expect = 8.5
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = -3
Query: 287 KPKTKRKASEEKFSSSLPASAKSRVVP--PSLISNP 186
KPKT+++ +E +S +S K V+P P IS+P
Sbjct: 262 KPKTEKEPEKEIPASEPVSSPKKSVIPASPKAISHP 297
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,449,415
Number of Sequences: 27780
Number of extensions: 157913
Number of successful extensions: 491
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 491
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 609015246
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -