Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_K13
(397 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase pr... 24 0.73
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 23 1.7
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 23 1.7
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 23 1.7
DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly pro... 21 3.9
L10433-1|AAA27732.1| 149|Apis mellifera transposase protein. 21 6.8
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 21 6.8
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 20 9.0
AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase ... 20 9.0
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 20 9.0
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 20 9.0
AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 20 9.0
>AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase
protein.
Length = 342
Score = 23.8 bits (49), Expect = 0.73
Identities = 9/30 (30%), Positives = 15/30 (50%)
Frame = +2
Query: 2 HEGKPSRNKFVQKYHIIEMGGDVHHGPPYN 91
H+ V + ++E+G DV PPY+
Sbjct: 244 HDNARPHTSLVTRQKLLELGWDVLPHPPYS 273
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 22.6 bits (46), Expect = 1.7
Identities = 7/18 (38%), Positives = 9/18 (50%)
Frame = +2
Query: 254 FLQRLSSWSWAYCDNCWN 307
F+ S W C+N WN
Sbjct: 89 FMSMRSELPWGSCNNYWN 106
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 22.6 bits (46), Expect = 1.7
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = -3
Query: 386 IKSTHYSFKLMAFTIMTMTTTSNQLVYSNS 297
I S HY K M +M M + ++Y S
Sbjct: 261 IPSDHYQVKAMVEIVMKMKWSYVSIIYEES 290
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 22.6 bits (46), Expect = 1.7
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -3
Query: 353 AFTIMTMTTTSNQLVYSNSYHSKPKTKRKAS 261
A TI T+TTT+ + + + P T + AS
Sbjct: 655 ATTITTITTTTTTTTTTTTTTTTPNTTQNAS 685
>DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly
protein 9 protein.
Length = 423
Score = 21.4 bits (43), Expect = 3.9
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +2
Query: 257 LQRLSSWSWAYCDNC 301
L+ +WSWA NC
Sbjct: 105 LEPYPNWSWAKNQNC 119
>L10433-1|AAA27732.1| 149|Apis mellifera transposase protein.
Length = 149
Score = 20.6 bits (41), Expect = 6.8
Identities = 8/28 (28%), Positives = 13/28 (46%)
Frame = +2
Query: 2 HEGKPSRNKFVQKYHIIEMGGDVHHGPP 85
H+ V + ++E+G DV PP
Sbjct: 122 HDNARPHTSLVTRQKLLELGWDVLPHPP 149
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein
protein.
Length = 471
Score = 20.6 bits (41), Expect = 6.8
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 29 FVQKYHIIEMGGDVHHGPPYNV 94
F+Q II MG + +GP NV
Sbjct: 15 FIQIVLIIVMGALMTYGPEANV 36
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 20.2 bits (40), Expect = 9.0
Identities = 8/28 (28%), Positives = 12/28 (42%)
Frame = +2
Query: 221 IWHSLAESSKIFLQRLSSWSWAYCDNCW 304
+W S E K+F + L W+ W
Sbjct: 387 LWISWEEGMKVFDELLLDADWSVNAGMW 414
>AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase
protein.
Length = 510
Score = 20.2 bits (40), Expect = 9.0
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +3
Query: 213 HPGFGTRWQRARK 251
HPGF + RAR+
Sbjct: 199 HPGFADKEYRARR 211
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 20.2 bits (40), Expect = 9.0
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 129 IPQLEELEKALAAKGLKD 182
+ Q E+LEKA GLK+
Sbjct: 805 VQQCEQLEKAPNTLGLKN 822
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 20.2 bits (40), Expect = 9.0
Identities = 7/15 (46%), Positives = 8/15 (53%)
Frame = +2
Query: 257 LQRLSSWSWAYCDNC 301
LQ WSWA +C
Sbjct: 108 LQPYPDWSWANYKDC 122
>AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly
protein MRJP5 protein.
Length = 598
Score = 20.2 bits (40), Expect = 9.0
Identities = 7/15 (46%), Positives = 8/15 (53%)
Frame = +2
Query: 257 LQRLSSWSWAYCDNC 301
LQ WSWA +C
Sbjct: 108 LQPYPDWSWANYKDC 122
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,523
Number of Sequences: 438
Number of extensions: 1890
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 9761793
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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